RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 BSCL2Q96G97 398 aaPredicted RBP4.32□□□□□ -1.72
CPSF7-220ENST00000541963 SPACA5Q96QH8 159 aa4.32□□□□□ -1.72
CPSF7-220ENST00000541963 MARVELD1Q9BSK0 173 aa4.32□□□□□ -1.72
CPSF7-220ENST00000541963 SRRQ9GZT4 340 aa4.32□□□□□ -1.72
CPSF7-220ENST00000541963 CHST6Q9GZX3 395 aa4.32□□□□□ -1.72
CPSF7-220ENST00000541963 SLITRK2Q9H156 845 aa4.32□□□□□ -1.72
CPSF7-220ENST00000541963 GAL3ST2Q9H3Q3 398 aa4.32□□□□□ -1.72
CPSF7-220ENST00000541963 RAB18Q9NP72 206 aa4.32□□□□□ -1.72
CPSF7-220ENST00000541963 IFT46Q9NQC8 304 aa4.32□□□□□ -1.72
CPSF7-220ENST00000541963 TAS2R4Q9NYW5 299 aa4.32□□□□□ -1.72
CPSF7-220ENST00000541963 TAS2R3Q9NYW6 316 aa4.32□□□□□ -1.72
CPSF7-220ENST00000541963 TBC1D24Q9ULP9 559 aa4.32□□□□□ -1.72
CPSF7-220ENST00000541963 SSR3Q9UNL2 185 aa4.32□□□□□ -1.72
CPSF7-220ENST00000541963 FOXJ3Q9UPW0 622 aa4.32□□□□□ -1.72
CPSF7-220ENST00000541963 KCNK7Q9Y2U2 307 aa4.32□□□□□ -1.72
CPSF7-220ENST00000541963 TBL2Q9Y4P3 447 aaKnown RBP4.32□□□□□ -1.72
CPSF7-220ENST00000541963 HSPB11Q9Y547 144 aa4.32□□□□□ -1.72
CPSF7-220ENST00000541963 SOX21Q9Y651 276 aaPredicted RBP4.32□□□□□ -1.72
CPSF7-220ENST00000541963 LINC00312Q9Y6C7 94 aa4.32□□□□□ -1.72
CPSF7-220ENST00000541963 JMJD1CQ15652 2540 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 TRAV24A0A0B4J272 114 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 IGKV1-12A0A0C4DH73 117 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 TRBV5-5A0A0J9YX44 114 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 FAM240BA0A1B0GVZ2 78 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 WRBO00258 174 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 GABRPO00591 440 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 RGS5O15539 181 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 PRAF2O60831 178 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 SC5DO75845 299 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 NDUFA7O95182 113 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 IGKV1D-12P01611 117 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 IGHV4-59P01825 116 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 RLN1P04808 185 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 ARG1P05089 322 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 CSN2P05814 226 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 IGHV1-8P0DP01 117 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 GTF2F2P13984 249 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 CCL3L1P16619 93 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 COX7A1P24310 79 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 SAA4P35542 130 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 ARHGDIBP52566 201 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 PRRX1P54821 245 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 KLRD1Q13241 179 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 RBM39Q14498 530 aaKnown RBP4.31□□□□□ -1.72
CPSF7-220ENST00000541963 SPHARQ15513 63 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 TRAM1Q15629 374 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 TATDN3Q17R31 274 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 MPV17LQ2QL34 196 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 PHLDA2Q53GA4 152 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 PAN3Q58A45 887 aaKnown RBP4.31□□□□□ -1.72
CPSF7-220ENST00000541963 MINOS1Q5TGZ0 78 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 Q6P435 159 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 BAIAP2L2Q6UXY1 529 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 ASCL4Q6XD76 172 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 HSD17B13Q7Z5P4 300 aaPredicted RBP4.31□□□□□ -1.72
CPSF7-220ENST00000541963 RTN4RL2Q86UN3 420 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 COMMD7Q86VX2 200 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 STX12Q86Y82 276 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 FAM219AQ8IW50 185 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 OSR2Q8N2R0 312 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 STPG2Q8N412 459 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 JAGN1Q8N5M9 183 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 ZFP41Q8N8Y5 198 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.31□□□□□ -1.72
CPSF7-220ENST00000541963 ZNF680Q8NEM1 530 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 OR4S1Q8NGB4 309 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 OR4D6Q8NGJ1 314 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 OR51A2Q8NGJ7 313 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 OR51T1Q8NGJ9 327 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 SGMS2Q8NHU3 365 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 ZNF596Q8TC21 504 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 ZNF431Q8TF32 576 aaPredicted RBP4.31□□□□□ -1.72
CPSF7-220ENST00000541963 PHLDA1Q8WV24 401 aaPredicted RBP4.31□□□□□ -1.72
CPSF7-220ENST00000541963 RBPMSQ93062 196 aaKnown RBP4.31□□□□□ -1.72
CPSF7-220ENST00000541963 MRPS24Q96EL2 167 aaKnown RBP4.31□□□□□ -1.72
CPSF7-220ENST00000541963 C1orf147Q96MC9 270 aaPredicted RBP4.31□□□□□ -1.72
CPSF7-220ENST00000541963 SSX3Q99909 188 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 PDCD10Q9BUL8 212 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 CHIAQ9BZP6 476 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 ZNF436Q9C0F3 470 aaPredicted RBP4.31□□□□□ -1.72
CPSF7-220ENST00000541963 NCOR1P1Q9H4R4 102 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 SPACA1Q9HBV2 294 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 RAB9BQ9NP90 201 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 IL36GQ9NZH8 169 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 ZNRD1Q9P1U0 126 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 GHRLQ9UBU3 117 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 VPREB3Q9UKI3 123 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 ST3GAL6Q9Y274 331 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 MMP24Q9Y5R2 645 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 MINOS1-NBL1R4GNA1 71 aa4.31□□□□□ -1.72
CPSF7-220ENST00000541963 A0A1W2PPK0 400 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 ODAMA1E959 279 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 CLPSL1A2RUU4 121 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 C7orf66A4D0T2 115 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 FABP12A6NFH5 140 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 ZNF729A6NN14 1252 aaPredicted RBP4.3□□□□□ -1.72
CPSF7-220ENST00000541963 MPTX1A8MV57 137 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 MCRIP1C9JLW8 97 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 TEX46H3BTG2 121 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 H3BUX3 64 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms