RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 C5orf30Q96GV9 206 aa8.74□□□□□ -1.01
COPA-205ENST00000541366 CKLFQ9UBR5 152 aa8.74□□□□□ -1.01
COPA-205ENST00000541366 UBQLN2Q9UHD9 624 aa8.74□□□□□ -1.01
COPA-205ENST00000541366 ZNF221Q9UK13 617 aa8.74□□□□□ -1.01
COPA-205ENST00000541366 IGKV1-6A0A0C4DH72 117 aa8.73□□□□□ -1.01
COPA-205ENST00000541366 PNMA8CA0A1B0GUJ8 204 aa8.73□□□□□ -1.01
COPA-205ENST00000541366 FAM223BA6NKX1 122 aa8.73□□□□□ -1.01
COPA-205ENST00000541366 CTRB1P17538 263 aa8.73□□□□□ -1.01
COPA-205ENST00000541366 ATF4P18848 351 aaPredicted RBP8.73□□□□□ -1.01
COPA-205ENST00000541366 CAPGP40121 348 aa8.73□□□□□ -1.01
COPA-205ENST00000541366 TAGLNQ01995 201 aaKnown RBP8.73□□□□□ -1.01
COPA-205ENST00000541366 SMN1Q16637 294 aaKnown RBP8.73□□□□□ -1.01
COPA-205ENST00000541366 C15orf32Q32M92 178 aa8.73□□□□□ -1.01
COPA-205ENST00000541366 C10orf55Q5SWW7 151 aa8.73□□□□□ -1.01
COPA-205ENST00000541366 CTRB2Q6GPI1 263 aa8.73□□□□□ -1.01
COPA-205ENST00000541366 FAM223AQ8IWN6 122 aa8.73□□□□□ -1.01
COPA-205ENST00000541366 APH1BQ8WW43 257 aa8.73□□□□□ -1.01
COPA-205ENST00000541366 EDARADDQ8WWZ3 215 aa8.73□□□□□ -1.01
COPA-205ENST00000541366 PTX4Q96A99 478 aa8.73□□□□□ -1.01
COPA-205ENST00000541366 MRPS18AQ9NVS2 196 aaKnown RBP8.73□□□□□ -1.01
COPA-205ENST00000541366 CLEC2DQ9UHP7 191 aa8.73□□□□□ -1.01
COPA-205ENST00000541366 A0A0A6YYD4 124 aa8.72□□□□□ -1.01
COPA-205ENST00000541366 ZNF320A2RRD8 509 aa8.72□□□□□ -1.01
COPA-205ENST00000541366 LGALS9O00182 355 aa8.72□□□□□ -1.01
COPA-205ENST00000541366 SHOXO15266 292 aa8.72□□□□□ -1.01
COPA-205ENST00000541366 GGCTO75223 188 aaKnown RBP8.72□□□□□ -1.01
COPA-205ENST00000541366 S1PR2O95136 353 aa8.72□□□□□ -1.01
COPA-205ENST00000541366 CD3GP09693 182 aa8.72□□□□□ -1.01
COPA-205ENST00000541366 FCGR1AP12314 374 aa8.72□□□□□ -1.01
COPA-205ENST00000541366 RPL35AP18077 110 aaKnown RBP8.72□□□□□ -1.01
COPA-205ENST00000541366 ZBTB25P24278 435 aa8.72□□□□□ -1.01
COPA-205ENST00000541366 FCGR2BP31994 310 aaPredicted RBP8.72□□□□□ -1.01
COPA-205ENST00000541366 APOC4P55056 127 aa8.72□□□□□ -1.01
COPA-205ENST00000541366 RPS27AP62979 156 aaKnown RBP8.72□□□□□ -1.01
COPA-205ENST00000541366 HLA-DRB3P79483 266 aa8.72□□□□□ -1.01
COPA-205ENST00000541366 PRSS8Q16651 343 aa8.72□□□□□ -1.01
COPA-205ENST00000541366 FBLIM1Q8WUP2 373 aa8.72□□□□□ -1.01
COPA-205ENST00000541366 ACOT12Q8WYK0 555 aa8.72□□□□□ -1.01
COPA-205ENST00000541366 PGLYRP3Q96LB9 341 aa8.72□□□□□ -1.01
COPA-205ENST00000541366 FGF20Q9NP95 211 aaPredicted RBP8.72□□□□□ -1.01
COPA-205ENST00000541366 BABAM2Q9NXR7 383 aa8.72□□□□□ -1.01
COPA-205ENST00000541366 FBXL17Q9UF56 701 aa8.72□□□□□ -1.01
COPA-205ENST00000541366 AK3Q9UIJ7 227 aa8.72□□□□□ -1.01
COPA-205ENST00000541366 EXOSC1Q9Y3B2 195 aaKnown RBP8.72□□□□□ -1.01
COPA-205ENST00000541366 ORC6Q9Y5N6 252 aa8.72□□□□□ -1.01
COPA-205ENST00000541366 HMX3A6NHT5 357 aa8.71□□□□□ -1.02
COPA-205ENST00000541366 XRCC3O43542 346 aa8.71□□□□□ -1.02
COPA-205ENST00000541366 TMEM177Q53S58 311 aa8.71□□□□□ -1.02
COPA-205ENST00000541366 CLEC19AQ6UXS0 136 aa8.71□□□□□ -1.02
COPA-205ENST00000541366 GPHB5Q86YW7 130 aa8.71□□□□□ -1.02
COPA-205ENST00000541366 CDH26Q8IXH8 852 aa8.71□□□□□ -1.02
COPA-205ENST00000541366 NECAP1Q8NC96 275 aa8.71□□□□□ -1.02
COPA-205ENST00000541366 OR1L6Q8NGR2 347 aa8.71□□□□□ -1.02
COPA-205ENST00000541366 CCDC140Q96MF4 163 aa8.71□□□□□ -1.02
COPA-205ENST00000541366 Q96MT0 163 aa8.71□□□□□ -1.02
COPA-205ENST00000541366 DERL3Q96Q80 235 aa8.71□□□□□ -1.02
COPA-205ENST00000541366 SDHAF2Q9NX18 166 aa8.71□□□□□ -1.02
COPA-205ENST00000541366 RDH8Q9NYR8 311 aa8.71□□□□□ -1.02
COPA-205ENST00000541366 RPL36Q9Y3U8 105 aaKnown RBP8.71□□□□□ -1.02
COPA-205ENST00000541366 ARL3P36405 182 aa8.7□□□□□ -1.02
COPA-205ENST00000541366 UNC119Q13432 240 aa8.7□□□□□ -1.02
COPA-205ENST00000541366 ANKRD55Q3KP44 614 aa8.7□□□□□ -1.02
COPA-205ENST00000541366 YIF1BQ5BJH7 314 aa8.7□□□□□ -1.02
COPA-205ENST00000541366 C1orf146Q5VVC0 180 aa8.7□□□□□ -1.02
COPA-205ENST00000541366 UNQ9165/PRO28630Q6UXU0 137 aa8.7□□□□□ -1.02
COPA-205ENST00000541366 TMPRSS11AQ6ZMR5 421 aa8.7□□□□□ -1.02
COPA-205ENST00000541366 MOB1BQ7L9L4 216 aa8.7□□□□□ -1.02
COPA-205ENST00000541366 TTC9CQ8N5M4 171 aa8.7□□□□□ -1.02
COPA-205ENST00000541366 TMEM217Q8N7C4 229 aa8.7□□□□□ -1.02
COPA-205ENST00000541366 STPG3Q8N7X2 389 aa8.7□□□□□ -1.02
COPA-205ENST00000541366 TMEM59Q9BXS4 323 aa8.7□□□□□ -1.02
COPA-205ENST00000541366 ZNF430Q9H8G1 570 aaPredicted RBP8.7□□□□□ -1.02
COPA-205ENST00000541366 Q9N2K0 584 aa8.7□□□□□ -1.02
COPA-205ENST00000541366 PLEKHJ1Q9NW61 149 aa8.7□□□□□ -1.02
COPA-205ENST00000541366 FBXL7Q9UJT9 491 aa8.7□□□□□ -1.02
COPA-205ENST00000541366 TRBV6-6A0A0A6YYG2 114 aa8.69□□□□□ -1.02
COPA-205ENST00000541366 A8MWP6 167 aa8.69□□□□□ -1.02
COPA-205ENST00000541366 UBE2CO00762 179 aa8.69□□□□□ -1.02
COPA-205ENST00000541366 SOCS1O15524 211 aa8.69□□□□□ -1.02
COPA-205ENST00000541366 WBP4O75554 376 aaKnown RBP8.69□□□□□ -1.02
COPA-205ENST00000541366 UBE2KP61086 200 aa8.69□□□□□ -1.02
COPA-205ENST00000541366 INSL4Q14641 139 aa8.69□□□□□ -1.02
COPA-205ENST00000541366 RBMS2Q15434 407 aaKnown RBP8.69□□□□□ -1.02
COPA-205ENST00000541366 ODF3L2Q3SX64 289 aa8.69□□□□□ -1.02
COPA-205ENST00000541366 ZNF585BQ52M93 769 aa8.69□□□□□ -1.02
COPA-205ENST00000541366 RBPMS2Q6ZRY4 209 aaKnown RBP8.69□□□□□ -1.02
COPA-205ENST00000541366 CEACAM19Q7Z692 300 aa8.69□□□□□ -1.02
COPA-205ENST00000541366 CBR4Q8N4T8 237 aa8.69□□□□□ -1.02
COPA-205ENST00000541366 OR2C3Q8N628 320 aa8.69□□□□□ -1.02
COPA-205ENST00000541366 TEX45Q8NA69 505 aa8.69□□□□□ -1.02
COPA-205ENST00000541366 PYDC1Q8WXC3 89 aa8.69□□□□□ -1.02
COPA-205ENST00000541366 GGHQ92820 318 aa8.69□□□□□ -1.02
COPA-205ENST00000541366 SLC29A1Q99808 456 aa8.69□□□□□ -1.02
COPA-205ENST00000541366 UQCC2Q9BRT2 126 aa8.69□□□□□ -1.02
COPA-205ENST00000541366 OR2D2Q9H210 308 aa8.69□□□□□ -1.02
COPA-205ENST00000541366 APLNQ9ULZ1 77 aa8.69□□□□□ -1.02
COPA-205ENST00000541366 IGHV3-35A0A0C4DH35 117 aa8.68□□□□□ -1.02
COPA-205ENST00000541366 DEFB4AO15263 64 aa8.68□□□□□ -1.02
COPA-205ENST00000541366 CRYZL1O95825 349 aa8.68□□□□□ -1.02
COPA-205ENST00000541366 IFNA4P05014 189 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms