RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 ACTR3CQ9C0K3 210 aaPredicted RBP12.06□□□□□ -0.48
SFSWAP-210ENST00000541286 CACNG5Q9UF02 275 aa12.06□□□□□ -0.48
SFSWAP-210ENST00000541286 PGLYRP1O75594 196 aaPredicted RBP12.06□□□□□ -0.48
SFSWAP-210ENST00000541286 S100GP29377 79 aa12.06□□□□□ -0.48
SFSWAP-210ENST00000541286 HOXA4Q00056 320 aaPredicted RBP12.06□□□□□ -0.48
SFSWAP-210ENST00000541286 TLE4Q04727 773 aa12.06□□□□□ -0.48
SFSWAP-210ENST00000541286 PLP2Q04941 152 aa12.06□□□□□ -0.48
SFSWAP-210ENST00000541286 ABLIM2Q6H8Q1 611 aa12.06□□□□□ -0.48
SFSWAP-210ENST00000541286 AQP7O14520 342 aa12.05□□□□□ -0.48
SFSWAP-210ENST00000541286 RBMXL2O75526 392 aaKnown RBP12.05□□□□□ -0.48
SFSWAP-210ENST00000541286 HPRT1P00492 218 aa12.05□□□□□ -0.48
SFSWAP-210ENST00000541286 RPLP1P05386 114 aaKnown RBP12.05□□□□□ -0.48
SFSWAP-210ENST00000541286 KLRB1Q12918 225 aa12.05□□□□□ -0.48
SFSWAP-210ENST00000541286 DAZAP2Q15038 168 aaPredicted RBP12.05□□□□□ -0.48
SFSWAP-210ENST00000541286 TCF23Q7RTU1 214 aa12.05□□□□□ -0.48
SFSWAP-210ENST00000541286 BEND2Q8NDZ0 799 aa12.05□□□□□ -0.48
SFSWAP-210ENST00000541286 SARAFQ96BY9 339 aa12.05□□□□□ -0.48
SFSWAP-210ENST00000541286 SDF2L1Q9HCN8 221 aa12.05□□□□□ -0.48
SFSWAP-210ENST00000541286 MRPS18CQ9Y3D5 142 aaKnown RBP12.05□□□□□ -0.48
SFSWAP-210ENST00000541286 HECTD1Q9ULT8 2610 aa12.05□□□□□ -0.48
SFSWAP-210ENST00000541286 PITX3O75364 302 aa12.05□□□□□ -0.48
SFSWAP-210ENST00000541286 PAX1P15863 534 aa12.05□□□□□ -0.48
SFSWAP-210ENST00000541286 KIR2DL2P43627 348 aaPredicted RBP12.05□□□□□ -0.48
SFSWAP-210ENST00000541286 ODF3L1Q8IXM7 274 aa12.05□□□□□ -0.48
SFSWAP-210ENST00000541286 TMEM18Q96B42 140 aa12.05□□□□□ -0.48
SFSWAP-210ENST00000541286 GPR146Q96CH1 333 aa12.05□□□□□ -0.48
SFSWAP-210ENST00000541286 PRDM14Q9GZV8 571 aa12.05□□□□□ -0.48
SFSWAP-210ENST00000541286 CLCF1Q9UBD9 225 aa12.05□□□□□ -0.48
SFSWAP-210ENST00000541286 USF3Q68DE3 2245 aa12.05□□□□□ -0.48
SFSWAP-210ENST00000541286 KIR2DS1A0A191URI9 304 aa12.05□□□□□ -0.48
SFSWAP-210ENST00000541286 LOC102723971A0A1B0GUV8 181 aa12.05□□□□□ -0.48
SFSWAP-210ENST00000541286 CD300LBA8K4G0 201 aa12.05□□□□□ -0.48
SFSWAP-210ENST00000541286 KIR2DS4P43632 304 aa12.05□□□□□ -0.48
SFSWAP-210ENST00000541286 FGF12P61328 243 aa12.05□□□□□ -0.48
SFSWAP-210ENST00000541286 KIR2DS1Q14954 304 aa12.05□□□□□ -0.48
SFSWAP-210ENST00000541286 ASCL4Q6XD76 172 aa12.05□□□□□ -0.48
SFSWAP-210ENST00000541286 TUBG2Q9NRH3 451 aa12.05□□□□□ -0.48
SFSWAP-210ENST00000541286 TRAPPC2LQ9UL33 140 aa12.05□□□□□ -0.48
SFSWAP-210ENST00000541286 PGPEP1LA6NFU8 196 aa12.04□□□□□ -0.48
SFSWAP-210ENST00000541286 ANKRD30BLA7E2S9 258 aa12.04□□□□□ -0.48
SFSWAP-210ENST00000541286 H7BYZ3 331 aa12.04□□□□□ -0.48
SFSWAP-210ENST00000541286 CRYABP02511 175 aaKnown RBP12.04□□□□□ -0.48
SFSWAP-210ENST00000541286 GRNP28799 593 aaKnown RBP12.04□□□□□ -0.48
SFSWAP-210ENST00000541286 IQCJQ1A5X6 159 aa12.04□□□□□ -0.48
SFSWAP-210ENST00000541286 CXorf67Q86X51 503 aaPredicted RBP12.04□□□□□ -0.48
SFSWAP-210ENST00000541286 MS4A10Q96PG2 267 aa12.04□□□□□ -0.48
SFSWAP-210ENST00000541286 Q6ZRM9 215 aa12.04□□□□□ -0.48
SFSWAP-210ENST00000541286 C1QTNF5Q9BXJ0 243 aa12.04□□□□□ -0.48
SFSWAP-210ENST00000541286 PATZ1Q9HBE1 687 aaKnown RBP12.04□□□□□ -0.48
SFSWAP-210ENST00000541286 CDH20Q9HBT6 801 aa12.04□□□□□ -0.48
SFSWAP-210ENST00000541286 DEGS1O15121 323 aa12.03□□□□□ -0.48
SFSWAP-210ENST00000541286 AGFG2O95081 481 aa12.03□□□□□ -0.48
SFSWAP-210ENST00000541286 F2RP25116 425 aa12.03□□□□□ -0.48
SFSWAP-210ENST00000541286 ZNF726P1Q15940 193 aa12.03□□□□□ -0.48
SFSWAP-210ENST00000541286 ZNF808Q8N4W9 903 aaPredicted RBP12.03□□□□□ -0.48
SFSWAP-210ENST00000541286 VN1R17PQ8TDU5 208 aa12.03□□□□□ -0.48
SFSWAP-210ENST00000541286 APH1AQ96BI3 265 aa12.03□□□□□ -0.48
SFSWAP-210ENST00000541286 PLPPR2Q96GM1 343 aa12.03□□□□□ -0.48
SFSWAP-210ENST00000541286 OR5B12Q96R08 314 aa12.03□□□□□ -0.48
SFSWAP-210ENST00000541286 FAM103A1Q9BTL3 118 aaKnown RBP12.03□□□□□ -0.48
SFSWAP-210ENST00000541286 LPAR2Q9HBW0 351 aa12.03□□□□□ -0.48
SFSWAP-210ENST00000541286 GCGP01275 180 aa12.03□□□□□ -0.48
SFSWAP-210ENST00000541286 BCL2P10415 239 aa12.03□□□□□ -0.48
SFSWAP-210ENST00000541286 GCH1P30793 250 aa12.03□□□□□ -0.48
SFSWAP-210ENST00000541286 PTPN13Q12923 2485 aa12.03□□□□□ -0.48
SFSWAP-210ENST00000541286 SPINK9Q5DT21 86 aa12.03□□□□□ -0.48
SFSWAP-210ENST00000541286 C11orf42Q8N5U0 333 aa12.03□□□□□ -0.48
SFSWAP-210ENST00000541286 GNPNAT1Q96EK6 184 aaPredicted RBP12.03□□□□□ -0.48
SFSWAP-210ENST00000541286 REPIN1Q9BWE0 567 aaKnown RBP12.03□□□□□ -0.48
SFSWAP-210ENST00000541286 TAAR3PQ9P1P4 343 aa12.03□□□□□ -0.48
SFSWAP-210ENST00000541286 NAGKQ9UJ70 344 aa12.03□□□□□ -0.48
SFSWAP-210ENST00000541286 ZNF391Q9UJN7 358 aa12.03□□□□□ -0.48
SFSWAP-210ENST00000541286 MED13LQ71F56 2210 aa12.03□□□□□ -0.48
SFSWAP-210ENST00000541286 TNFSF13O75888 250 aa12.03□□□□□ -0.48
SFSWAP-210ENST00000541286 OPN1MWP04001 364 aa12.03□□□□□ -0.48
SFSWAP-210ENST00000541286 GRPP07492 148 aa12.03□□□□□ -0.48
SFSWAP-210ENST00000541286 OPN1MW2P0DN77 364 aa12.03□□□□□ -0.48
SFSWAP-210ENST00000541286 OPN1MW3P0DN78 364 aa12.03□□□□□ -0.48
SFSWAP-210ENST00000541286 CEACAM21Q3KPI0 293 aa12.03□□□□□ -0.48
SFSWAP-210ENST00000541286 FAM53AQ6NSI3 398 aaPredicted RBP12.03□□□□□ -0.48
SFSWAP-210ENST00000541286 RNASE8Q8TDE3 154 aaKnown RBP12.03□□□□□ -0.48
SFSWAP-210ENST00000541286 TMEM56Q96MV1 263 aa12.03□□□□□ -0.48
SFSWAP-210ENST00000541286 ATP23Q9Y6H3 246 aa12.03□□□□□ -0.48
SFSWAP-210ENST00000541286 TMEM56-RWDD3S4R434 201 aa12.03□□□□□ -0.48
SFSWAP-210ENST00000541286 LOC102724200A0A096LPH7 203 aaPredicted RBP12.02□□□□□ -0.48
SFSWAP-210ENST00000541286 A0A0G2JNJ9 132 aa12.02□□□□□ -0.48
SFSWAP-210ENST00000541286 RAB4AP20338 218 aa12.02□□□□□ -0.48
SFSWAP-210ENST00000541286 GNLYP22749 145 aa12.02□□□□□ -0.48
SFSWAP-210ENST00000541286 CEBPDP49716 269 aaPredicted RBP12.02□□□□□ -0.48
SFSWAP-210ENST00000541286 MRPS11P82912 194 aaKnown RBP12.02□□□□□ -0.48
SFSWAP-210ENST00000541286 RIPPLY2Q5TAB7 128 aa12.02□□□□□ -0.48
SFSWAP-210ENST00000541286 Q6ZSR3 168 aa12.02□□□□□ -0.48
SFSWAP-210ENST00000541286 FAM58AQ8N1B3 248 aa12.02□□□□□ -0.48
SFSWAP-210ENST00000541286 APOBEC3DQ96AK3 386 aaPredicted RBP12.02□□□□□ -0.48
SFSWAP-210ENST00000541286 ATP5SQ99766 215 aa12.02□□□□□ -0.48
SFSWAP-210ENST00000541286 TMEM204Q9BSN7 226 aa12.02□□□□□ -0.48
SFSWAP-210ENST00000541286 SRD5A3Q9H8P0 318 aa12.02□□□□□ -0.48
SFSWAP-210ENST00000541286 DNAJC4Q9NNZ3 241 aa12.02□□□□□ -0.48
SFSWAP-210ENST00000541286 PSENENQ9NZ42 101 aa12.02□□□□□ -0.48
SFSWAP-210ENST00000541286 IL36GQ9NZH8 169 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms