RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 RPL27AP46776 148 aaKnown RBP12.83□□□□□ -0.36
SMARCA4-207ENST00000541122 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.83□□□□□ -0.36
SMARCA4-207ENST00000541122 SPINK14Q6IE38 97 aa12.83□□□□□ -0.36
SMARCA4-207ENST00000541122 TMEM242Q9NWH2 141 aa12.83□□□□□ -0.36
SMARCA4-207ENST00000541122 DOCK5Q9H7D0 1870 aa12.83□□□□□ -0.36
SMARCA4-207ENST00000541122 TNFSF10P50591 281 aa12.83□□□□□ -0.36
SMARCA4-207ENST00000541122 STARD6P59095 220 aa12.83□□□□□ -0.36
SMARCA4-207ENST00000541122 ATOH7Q8N100 152 aa12.83□□□□□ -0.36
SMARCA4-207ENST00000541122 NPCDR1Q9BY65 106 aa12.83□□□□□ -0.36
SMARCA4-207ENST00000541122 PRDM13Q9H4Q3 707 aa12.83□□□□□ -0.36
SMARCA4-207ENST00000541122 COA4Q9NYJ1 87 aa12.83□□□□□ -0.36
SMARCA4-207ENST00000541122 ICAM4Q14773 271 aa12.83□□□□□ -0.36
SMARCA4-207ENST00000541122 SNAI3Q3KNW1 292 aa12.83□□□□□ -0.36
SMARCA4-207ENST00000541122 SAPCD1Q5SSQ6 148 aa12.83□□□□□ -0.36
SMARCA4-207ENST00000541122 CT55Q8WUE5 264 aa12.83□□□□□ -0.36
SMARCA4-207ENST00000541122 JPT1Q9UK76 154 aa12.83□□□□□ -0.36
SMARCA4-207ENST00000541122 RPL8P62917 257 aaKnown RBP12.82□□□□□ -0.36
SMARCA4-207ENST00000541122 EGR4Q05215 589 aa12.82□□□□□ -0.36
SMARCA4-207ENST00000541122 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.82□□□□□ -0.36
SMARCA4-207ENST00000541122 RAB1CQ92928 201 aa12.82□□□□□ -0.36
SMARCA4-207ENST00000541122 NEUROG3Q9Y4Z2 214 aa12.82□□□□□ -0.36
SMARCA4-207ENST00000541122 MCM3APO60318 1980 aa12.82□□□□□ -0.36
SMARCA4-207ENST00000541122 F5P12259 2224 aa12.82□□□□□ -0.36
SMARCA4-207ENST00000541122 SH2D7A6NKC9 451 aaPredicted RBP12.82□□□□□ -0.36
SMARCA4-207ENST00000541122 MAGEA5P43359 124 aa12.82□□□□□ -0.36
SMARCA4-207ENST00000541122 ZNF502Q8TBZ5 544 aa12.82□□□□□ -0.36
SMARCA4-207ENST00000541122 MPV17P39210 176 aa12.82□□□□□ -0.36
SMARCA4-207ENST00000541122 RBPMS2Q6ZRY4 209 aaKnown RBP12.82□□□□□ -0.36
SMARCA4-207ENST00000541122 SPAG17Q6Q759 2223 aa12.82□□□□□ -0.36
SMARCA4-207ENST00000541122 MT-CO3P00414 261 aa12.82□□□□□ -0.36
SMARCA4-207ENST00000541122 SPINK2P20155 84 aa12.82□□□□□ -0.36
SMARCA4-207ENST00000541122 SRSF3P84103 164 aaKnown RBP12.82□□□□□ -0.36
SMARCA4-207ENST00000541122 NABP2Q9BQ15 211 aa12.82□□□□□ -0.36
SMARCA4-207ENST00000541122 TCF19Q9Y242 345 aa12.82□□□□□ -0.36
SMARCA4-207ENST00000541122 J3QRE1 110 aa12.81□□□□□ -0.36
SMARCA4-207ENST00000541122 CKAP5Q14008 2032 aa12.81□□□□□ -0.36
SMARCA4-207ENST00000541122 ZNF146Q15072 292 aa12.81□□□□□ -0.36
SMARCA4-207ENST00000541122 LINC00114Q6XXX2 140 aa12.81□□□□□ -0.36
SMARCA4-207ENST00000541122 STPG3Q8N7X2 389 aa12.81□□□□□ -0.36
SMARCA4-207ENST00000541122 CHODLQ9H9P2 273 aa12.81□□□□□ -0.36
SMARCA4-207ENST00000541122 WNT16Q9UBV4 365 aa12.81□□□□□ -0.36
SMARCA4-207ENST00000541122 A0A1B0GW64 132 aa12.81□□□□□ -0.36
SMARCA4-207ENST00000541122 OTX1P32242 354 aaPredicted RBP12.81□□□□□ -0.36
SMARCA4-207ENST00000541122 RPL23P62829 140 aaKnown RBP12.81□□□□□ -0.36
SMARCA4-207ENST00000541122 RPL31P62899 125 aaKnown RBP12.81□□□□□ -0.36
SMARCA4-207ENST00000541122 OR51G1Q8NGK1 321 aa12.81□□□□□ -0.36
SMARCA4-207ENST00000541122 ZNF501Q96CX3 271 aaPredicted RBP12.81□□□□□ -0.36
SMARCA4-207ENST00000541122 VCX2Q9H322 139 aa12.81□□□□□ -0.36
SMARCA4-207ENST00000541122 C21orf140B9A014 251 aa12.81□□□□□ -0.36
SMARCA4-207ENST00000541122 GFRALQ6UXV0 394 aa12.81□□□□□ -0.36
SMARCA4-207ENST00000541122 TMEM106BQ9NUM4 274 aa12.81□□□□□ -0.36
SMARCA4-207ENST00000541122 MYO16Q9Y6X6 1858 aa12.81□□□□□ -0.36
SMARCA4-207ENST00000541122 GPX4P36969 197 aaPredicted RBP12.8□□□□□ -0.36
SMARCA4-207ENST00000541122 SMAGPQ0VAQ4 97 aa12.8□□□□□ -0.36
SMARCA4-207ENST00000541122 DRAM1Q8N682 238 aa12.8□□□□□ -0.36
SMARCA4-207ENST00000541122 TNFRSF19Q9NS68 423 aa12.8□□□□□ -0.36
SMARCA4-207ENST00000541122 WBP1LQ9NX94 342 aa12.8□□□□□ -0.36
SMARCA4-207ENST00000541122 CLEC1BQ9P126 229 aa12.8□□□□□ -0.36
SMARCA4-207ENST00000541122 IL9P15248 144 aa12.8□□□□□ -0.36
SMARCA4-207ENST00000541122 HIST3H2BBQ8N257 126 aa12.8□□□□□ -0.36
SMARCA4-207ENST00000541122 TMEM56-RWDD3S4R434 201 aa12.8□□□□□ -0.36
SMARCA4-207ENST00000541122 TRBV24-1A0A075B6N3 115 aa12.8□□□□□ -0.36
SMARCA4-207ENST00000541122 MUC15Q8N387 334 aa12.8□□□□□ -0.36
SMARCA4-207ENST00000541122 TRGV8A0A0C4DH27 118 aa12.8□□□□□ -0.36
SMARCA4-207ENST00000541122 C19orf67A6NJJ6 358 aa12.8□□□□□ -0.36
SMARCA4-207ENST00000541122 J3QW42 95 aa12.8□□□□□ -0.36
SMARCA4-207ENST00000541122 NEUROG1Q92886 237 aa12.8□□□□□ -0.36
SMARCA4-207ENST00000541122 TMEM54Q969K7 222 aa12.8□□□□□ -0.36
SMARCA4-207ENST00000541122 ZNF714Q96N38 554 aa12.8□□□□□ -0.36
SMARCA4-207ENST00000541122 IL4P05112 153 aa12.79□□□□□ -0.36
SMARCA4-207ENST00000541122 PTGDSP41222 190 aa12.79□□□□□ -0.36
SMARCA4-207ENST00000541122 MRPL52Q86TS9 123 aaKnown RBP12.79□□□□□ -0.36
SMARCA4-207ENST00000541122 HIST1H2BLQ99880 126 aa12.79□□□□□ -0.36
SMARCA4-207ENST00000541122 NUDT3O95989 172 aa12.79□□□□□ -0.36
SMARCA4-207ENST00000541122 ZNF324BQ6AW86 544 aaPredicted RBP12.79□□□□□ -0.36
SMARCA4-207ENST00000541122 AMMECR1LQ6DCA0 310 aa12.79□□□□□ -0.36
SMARCA4-207ENST00000541122 WDR31Q8NA23 367 aa12.79□□□□□ -0.36
SMARCA4-207ENST00000541122 C18orf12Q96KH6 178 aa12.79□□□□□ -0.36
SMARCA4-207ENST00000541122 WNT10AQ9GZT5 417 aa12.79□□□□□ -0.36
SMARCA4-207ENST00000541122 COL4A1P02462 1669 aa12.79□□□□□ -0.36
SMARCA4-207ENST00000541122 PPIHO43447 177 aaKnown RBP12.79□□□□□ -0.36
SMARCA4-207ENST00000541122 UCP2P55851 309 aa12.79□□□□□ -0.36
SMARCA4-207ENST00000541122 PSG9Q00887 426 aa12.79□□□□□ -0.36
SMARCA4-207ENST00000541122 BEND2Q8NDZ0 799 aa12.79□□□□□ -0.36
SMARCA4-207ENST00000541122 C14orf144Q96I85 54 aa12.79□□□□□ -0.36
SMARCA4-207ENST00000541122 DIRC2Q96SL1 478 aa12.79□□□□□ -0.36
SMARCA4-207ENST00000541122 A0A1B0GW15 77 aa12.79□□□□□ -0.36
SMARCA4-207ENST00000541122 RTP5Q14D33 572 aa12.79□□□□□ -0.36
SMARCA4-207ENST00000541122 ZNF525Q8N782 197 aa12.79□□□□□ -0.36
SMARCA4-207ENST00000541122 SRSF12Q8WXF0 261 aaKnown RBP12.79□□□□□ -0.36
SMARCA4-207ENST00000541122 ZNF414Q96IQ9 312 aa12.79□□□□□ -0.36
SMARCA4-207ENST00000541122 RAB1BQ9H0U4 201 aa12.79□□□□□ -0.36
SMARCA4-207ENST00000541122 SCN3AQ9NY46 2000 aa12.78□□□□□ -0.36
SMARCA4-207ENST00000541122 ADRA2AP08913 450 aa12.78□□□□□ -0.36
SMARCA4-207ENST00000541122 STAG3L3P0CL85 134 aa12.78□□□□□ -0.36
SMARCA4-207ENST00000541122 TMEM78Q5T7P6 136 aa12.78□□□□□ -0.36
SMARCA4-207ENST00000541122 TDHQ8IZJ6 230 aa12.78□□□□□ -0.36
SMARCA4-207ENST00000541122 SLC25A10Q9UBX3 287 aaPredicted RBP12.78□□□□□ -0.36
SMARCA4-207ENST00000541122 IGHV5-10-1A0A0J9YXX1 117 aa12.78□□□□□ -0.36
SMARCA4-207ENST00000541122 IL6RP08887 468 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms