RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 GPX8Q8TED1 209 aa10.25□□□□□ -0.77
LTBR-208ENST00000541005 GIMAP1Q8WWP7 306 aa10.25□□□□□ -0.77
LTBR-208ENST00000541005 TPSG1Q9NRR2 321 aa10.25□□□□□ -0.77
LTBR-208ENST00000541005 SMIM31A0A1B0GVY4 71 aa10.24□□□□□ -0.77
LTBR-208ENST00000541005 MEIS3P1A6NDR6 274 aa10.24□□□□□ -0.77
LTBR-208ENST00000541005 SRRM4A7MD48 611 aaKnown RBP10.24□□□□□ -0.77
LTBR-208ENST00000541005 SHOXO15266 292 aa10.24□□□□□ -0.77
LTBR-208ENST00000541005 TPPPO94811 219 aa10.24□□□□□ -0.77
LTBR-208ENST00000541005 CRYZL1O95825 349 aa10.24□□□□□ -0.77
LTBR-208ENST00000541005 CA2P00918 260 aa10.24□□□□□ -0.77
LTBR-208ENST00000541005 PF4P02776 101 aa10.24□□□□□ -0.77
LTBR-208ENST00000541005 SSBP2P81877 361 aaPredicted RBP10.24□□□□□ -0.77
LTBR-208ENST00000541005 C18orf65Q6ZTR6 163 aa10.24□□□□□ -0.77
LTBR-208ENST00000541005 PPP1R27Q86WC6 154 aa10.24□□□□□ -0.77
LTBR-208ENST00000541005 LINC00482Q8N8I6 264 aa10.24□□□□□ -0.77
LTBR-208ENST00000541005 ZBTB34Q8NCN2 500 aa10.24□□□□□ -0.77
LTBR-208ENST00000541005 KLHL30-AS1Q8NEE0 82 aa10.24□□□□□ -0.77
LTBR-208ENST00000541005 P2RX4Q99571 388 aa10.24□□□□□ -0.77
LTBR-208ENST00000541005 MRPS7Q9Y2R9 242 aaKnown RBP10.24□□□□□ -0.77
LTBR-208ENST00000541005 NUBP2Q9Y5Y2 271 aa10.24□□□□□ -0.77
LTBR-208ENST00000541005 WSB1Q9Y6I7 421 aa10.24□□□□□ -0.77
LTBR-208ENST00000541005 NUDT19A8MXV4 375 aa10.23□□□□□ -0.77
LTBR-208ENST00000541005 SULT1C2O00338 296 aa10.23□□□□□ -0.77
LTBR-208ENST00000541005 UBE2KP61086 200 aa10.23□□□□□ -0.77
LTBR-208ENST00000541005 RPL30P62888 115 aaKnown RBP10.23□□□□□ -0.77
LTBR-208ENST00000541005 DYRK1AQ13627 763 aa10.23□□□□□ -0.77
LTBR-208ENST00000541005 KIAA0141Q14154 515 aaPredicted RBP10.23□□□□□ -0.77
LTBR-208ENST00000541005 SPCS2Q15005 226 aa10.23□□□□□ -0.77
LTBR-208ENST00000541005 MRGPRG-AS1Q2M3A8 158 aa10.23□□□□□ -0.77
LTBR-208ENST00000541005 BEAN1Q3B7T3 259 aa10.23□□□□□ -0.77
LTBR-208ENST00000541005 AKIRIN2Q53H80 203 aa10.23□□□□□ -0.77
LTBR-208ENST00000541005 DHRS11Q6UWP2 260 aa10.23□□□□□ -0.77
LTBR-208ENST00000541005 ZNF66Q6ZN08 573 aa10.23□□□□□ -0.77
LTBR-208ENST00000541005 LCNL1Q6ZST4 164 aa10.23□□□□□ -0.77
LTBR-208ENST00000541005 C8orf86Q6ZUL3 223 aa10.23□□□□□ -0.77
LTBR-208ENST00000541005 CLVS1Q8IUQ0 354 aaPredicted RBP10.23□□□□□ -0.77
LTBR-208ENST00000541005 TEX45Q8NA69 505 aa10.23□□□□□ -0.77
LTBR-208ENST00000541005 C4orf3Q8WVX3 66 aa10.23□□□□□ -0.77
LTBR-208ENST00000541005 ARPC1AQ92747 370 aa10.23□□□□□ -0.77
LTBR-208ENST00000541005 CCDC59Q9P031 241 aaKnown RBP10.23□□□□□ -0.77
LTBR-208ENST00000541005 FOXA2Q9Y261 457 aaPredicted RBP10.23□□□□□ -0.77
LTBR-208ENST00000541005 PRELID3BQ9Y3B1 194 aa10.23□□□□□ -0.77
LTBR-208ENST00000541005 G3V4G9 280 aa10.22□□□□□ -0.77
LTBR-208ENST00000541005 J3QRK9 145 aa10.22□□□□□ -0.77
LTBR-208ENST00000541005 ARPC1BO15143 372 aaKnown RBP10.22□□□□□ -0.77
LTBR-208ENST00000541005 SOX15O60248 233 aa10.22□□□□□ -0.77
LTBR-208ENST00000541005 FCER2P06734 321 aa10.22□□□□□ -0.77
LTBR-208ENST00000541005 CD33P20138 364 aa10.22□□□□□ -0.77
LTBR-208ENST00000541005 MYCNOSP40205 109 aa10.22□□□□□ -0.77
LTBR-208ENST00000541005 KIR2DS2P43631 304 aa10.22□□□□□ -0.77
LTBR-208ENST00000541005 DEFA6Q01524 100 aa10.22□□□□□ -0.77
LTBR-208ENST00000541005 TMEM267Q0VDI3 215 aaPredicted RBP10.22□□□□□ -0.77
LTBR-208ENST00000541005 ECSCRQ19T08 205 aa10.22□□□□□ -0.77
LTBR-208ENST00000541005 VMA21Q3ZAQ7 101 aa10.22□□□□□ -0.77
LTBR-208ENST00000541005 PYHIN1Q6K0P9 492 aa10.22□□□□□ -0.77
LTBR-208ENST00000541005 MRPL41Q8IXM3 137 aaKnown RBP10.22□□□□□ -0.77
LTBR-208ENST00000541005 OR5H2Q8NGV7 314 aa10.22□□□□□ -0.77
LTBR-208ENST00000541005 OR4S2Q8NH73 311 aa10.22□□□□□ -0.77
LTBR-208ENST00000541005 SECTM1Q8WVN6 248 aa10.22□□□□□ -0.77
LTBR-208ENST00000541005 MOB3AQ96BX8 217 aa10.22□□□□□ -0.77
LTBR-208ENST00000541005 RCC1LQ96I51 464 aaKnown RBP10.22□□□□□ -0.77
LTBR-208ENST00000541005 UBE2E2Q96LR5 201 aa10.22□□□□□ -0.77
LTBR-208ENST00000541005 KLK15Q9H2R5 256 aa10.22□□□□□ -0.77
LTBR-208ENST00000541005 CCL28Q9NRJ3 127 aa10.22□□□□□ -0.77
LTBR-208ENST00000541005 EHFQ9NZC4 300 aa10.22□□□□□ -0.77
LTBR-208ENST00000541005 SORL1Q92673 2214 aa10.21□□□□□ -0.77
LTBR-208ENST00000541005 A0A1W2PN81 502 aa10.21□□□□□ -0.77
LTBR-208ENST00000541005 RBFOX2O43251 390 aaKnown RBP eCLIP10.21□□□□□ -0.773e-10■■■■□ 19.3
LTBR-208ENST00000541005 FCGR3BO75015 233 aa10.21□□□□□ -0.77
LTBR-208ENST00000541005 DUS4LO95620 317 aaKnown RBP10.21□□□□□ -0.77
LTBR-208ENST00000541005 SAA1P0DJI8 122 aaPredicted RBP10.21□□□□□ -0.77
LTBR-208ENST00000541005 RCVRNP35243 200 aa10.21□□□□□ -0.77
LTBR-208ENST00000541005 CHRNA7P36544 502 aa10.21□□□□□ -0.77
LTBR-208ENST00000541005 BRWD1-AS2P59051 145 aa10.21□□□□□ -0.77
LTBR-208ENST00000541005 HERV-K104P61576 105 aa10.21□□□□□ -0.77
LTBR-208ENST00000541005 RUNX1Q01196 453 aa10.21□□□□□ -0.77
LTBR-208ENST00000541005 PJVKQ0ZLH3 352 aa10.21□□□□□ -0.77
LTBR-208ENST00000541005 FHL3Q13643 280 aa10.21□□□□□ -0.77
LTBR-208ENST00000541005 FXYD3Q14802 87 aa10.21□□□□□ -0.77
LTBR-208ENST00000541005 PRSS8Q16651 343 aa10.21□□□□□ -0.77
LTBR-208ENST00000541005 ACTBL2Q562R1 376 aa10.21□□□□□ -0.77
LTBR-208ENST00000541005 TMEM65Q6PI78 240 aa10.21□□□□□ -0.77
LTBR-208ENST00000541005 C1QL4Q86Z23 238 aa10.21□□□□□ -0.77
LTBR-208ENST00000541005 SNX29P2Q8IUI4 249 aa10.21□□□□□ -0.77
LTBR-208ENST00000541005 LYSMD2Q8IV50 215 aa10.21□□□□□ -0.77
LTBR-208ENST00000541005 MFSD4AQ8N468 514 aa10.21□□□□□ -0.77
LTBR-208ENST00000541005 ZNF491Q8N8L2 437 aa10.21□□□□□ -0.77
LTBR-208ENST00000541005 OR5M8Q8NGP6 311 aa10.21□□□□□ -0.77
LTBR-208ENST00000541005 DYNC2LI1Q8TCX1 351 aa10.21□□□□□ -0.77
LTBR-208ENST00000541005 ABHD5Q8WTS1 349 aa10.21□□□□□ -0.77
LTBR-208ENST00000541005 C15orf40Q8WUR7 153 aa10.21□□□□□ -0.77
LTBR-208ENST00000541005 BORCS5Q969J3 196 aa10.21□□□□□ -0.77
LTBR-208ENST00000541005 RAX2Q96IS3 184 aa10.21□□□□□ -0.77
LTBR-208ENST00000541005 TMEM68Q96MH6 324 aa10.21□□□□□ -0.77
LTBR-208ENST00000541005 CLCC1Q96S66 551 aa10.21□□□□□ -0.77
LTBR-208ENST00000541005 SLC5A7Q9GZV3 580 aa10.21□□□□□ -0.77
LTBR-208ENST00000541005 TAS2R8Q9NYW2 309 aa10.21□□□□□ -0.77
LTBR-208ENST00000541005 EXTL2Q9UBQ6 330 aa10.21□□□□□ -0.77
LTBR-208ENST00000541005 FAM25AB3EWG3 89 aa10.2□□□□□ -0.78
LTBR-208ENST00000541005 FAM25CB3EWG5 89 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms