RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 DEFB125Q8N687 156 aa20.22■□□□□ 0.83
CHFR-218ENST00000540963 HARBI1Q96MB7 349 aa20.22■□□□□ 0.83
CHFR-218ENST00000540963 LPAR5Q9H1C0 372 aa20.22■□□□□ 0.83
CHFR-218ENST00000540963 SRD5A3Q9H8P0 318 aa20.22■□□□□ 0.83
CHFR-218ENST00000540963 C12orf4Q9NQ89 552 aa20.22■□□□□ 0.83
CHFR-218ENST00000540963 OR11H12B2RN74 326 aa20.21■□□□□ 0.83
CHFR-218ENST00000540963 SOCS1O15524 211 aa20.21■□□□□ 0.83
CHFR-218ENST00000540963 CD7P09564 240 aa20.21■□□□□ 0.83
CHFR-218ENST00000540963 OR9G9P0C7N8 305 aa20.21■□□□□ 0.83
CHFR-218ENST00000540963 MAP2K4P45985 399 aa20.21■□□□□ 0.83
CHFR-218ENST00000540963 SERPINB10P48595 397 aa20.21■□□□□ 0.83
CHFR-218ENST00000540963 DEFA5Q01523 94 aa20.21■□□□□ 0.83
CHFR-218ENST00000540963 CBX3Q13185 183 aa20.21■□□□□ 0.83
CHFR-218ENST00000540963 TMEM177Q53S58 311 aa20.21■□□□□ 0.83
CHFR-218ENST00000540963 FAM89BQ8N5H3 189 aa20.21■□□□□ 0.83
CHFR-218ENST00000540963 URM1Q9BTM9 101 aaKnown RBP20.21■□□□□ 0.83
CHFR-218ENST00000540963 ZC4H2Q9NQZ6 224 aa20.21■□□□□ 0.83
CHFR-218ENST00000540963 RDH8Q9NYR8 311 aa20.21■□□□□ 0.83
CHFR-218ENST00000540963 BMPR1BO00238 502 aa20.2■□□□□ 0.82
CHFR-218ENST00000540963 CRHBPP24387 322 aa20.2■□□□□ 0.82
CHFR-218ENST00000540963 TMEM50BP56557 158 aa20.2■□□□□ 0.82
CHFR-218ENST00000540963 DEFB114Q30KQ6 69 aa20.2■□□□□ 0.82
CHFR-218ENST00000540963 DYNLRB2Q8TF09 96 aa20.2■□□□□ 0.82
CHFR-218ENST00000540963 KCTD12Q96CX2 325 aaKnown RBP20.2■□□□□ 0.82
CHFR-218ENST00000540963 PHB2Q99623 299 aa20.2■□□□□ 0.82
CHFR-218ENST00000540963 HDHD3Q9BSH5 251 aaPredicted RBP20.2■□□□□ 0.82
CHFR-218ENST00000540963 TECRQ9NZ01 308 aaKnown RBP20.2■□□□□ 0.82
CHFR-218ENST00000540963 MSGN1A6NI15 193 aa20.19■□□□□ 0.82
CHFR-218ENST00000540963 RBMXL2O75526 392 aaKnown RBP20.19■□□□□ 0.82
CHFR-218ENST00000540963 P2RY14Q15391 338 aa20.19■□□□□ 0.82
CHFR-218ENST00000540963 UFD1Q92890 307 aa20.19■□□□□ 0.82
CHFR-218ENST00000540963 ZNF230Q9UIE0 474 aaPredicted RBP20.19■□□□□ 0.82
CHFR-218ENST00000540963 TPRKBQ9Y3C4 175 aa20.19■□□□□ 0.82
CHFR-218ENST00000540963 AK6Q9Y3D8 172 aaKnown RBP20.19■□□□□ 0.82
CHFR-218ENST00000540963 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP20.18■□□□□ 0.82
CHFR-218ENST00000540963 TRBV9A0A0B4J1U6 114 aa20.18■□□□□ 0.82
CHFR-218ENST00000540963 IGKV1-6A0A0C4DH72 117 aa20.18■□□□□ 0.82
CHFR-218ENST00000540963 SHOXO15266 292 aa20.18■□□□□ 0.82
CHFR-218ENST00000540963 RRASP10301 218 aa20.18■□□□□ 0.82
CHFR-218ENST00000540963 KIR2DS2P43631 304 aa20.18■□□□□ 0.82
CHFR-218ENST00000540963 FABP5Q01469 135 aa20.18■□□□□ 0.82
CHFR-218ENST00000540963 PLA2G7Q13093 441 aa20.18■□□□□ 0.82
CHFR-218ENST00000540963 MRGPRG-AS1Q2M3A8 158 aa20.18■□□□□ 0.82
CHFR-218ENST00000540963 TEX45Q8NA69 505 aa20.18■□□□□ 0.82
CHFR-218ENST00000540963 OR6M1Q8NGM8 313 aa20.18■□□□□ 0.82
CHFR-218ENST00000540963 FRAS1Q86XX4 4008 aa20.18■□□□□ 0.82
CHFR-218ENST00000540963 TRDCB7Z8K6 153 aa20.17■□□□□ 0.82
CHFR-218ENST00000540963 RGS10O43665 173 aa20.17■□□□□ 0.82
CHFR-218ENST00000540963 TUSC2O75896 110 aa20.17■□□□□ 0.82
CHFR-218ENST00000540963 HSMCR30P0CW71 290 aa20.17■□□□□ 0.82
CHFR-218ENST00000540963 RHOGP84095 191 aa20.17■□□□□ 0.82
CHFR-218ENST00000540963 ATP5G2Q06055 141 aa20.17■□□□□ 0.82
CHFR-218ENST00000540963 EXOSC2Q13868 293 aaKnown RBP20.17■□□□□ 0.82
CHFR-218ENST00000540963 RTL8BQ17RB0 113 aa20.17■□□□□ 0.82
CHFR-218ENST00000540963 AKIP1Q9NQ31 210 aa20.17■□□□□ 0.82
CHFR-218ENST00000540963 SLC17A2O00624 439 aa20.16■□□□□ 0.82
CHFR-218ENST00000540963 MLLT11Q13015 90 aaPredicted RBP20.16■□□□□ 0.82
CHFR-218ENST00000540963 OR4A4PQ8NGN8 299 aa20.16■□□□□ 0.82
CHFR-218ENST00000540963 SDHAF2Q9NX18 166 aa20.16■□□□□ 0.82
CHFR-218ENST00000540963 SRRM4A7MD48 611 aaKnown RBP20.15■□□□□ 0.82
CHFR-218ENST00000540963 DIRAS3O95661 229 aa20.15■□□□□ 0.82
CHFR-218ENST00000540963 LY6G6CO95867 125 aa20.15■□□□□ 0.82
CHFR-218ENST00000540963 CLDN12P56749 244 aa20.15■□□□□ 0.82
CHFR-218ENST00000540963 UBE2KP61086 200 aa20.15■□□□□ 0.82
CHFR-218ENST00000540963 PRSS8Q16651 343 aa20.15■□□□□ 0.82
CHFR-218ENST00000540963 VMA21Q3ZAQ7 101 aa20.15■□□□□ 0.82
CHFR-218ENST00000540963 SLC16A13Q7RTY0 426 aa20.15■□□□□ 0.82
CHFR-218ENST00000540963 PRSS48Q7RTY5 328 aa20.15■□□□□ 0.82
CHFR-218ENST00000540963 SRSF12Q8WXF0 261 aaKnown RBP20.15■□□□□ 0.82
CHFR-218ENST00000540963 MGLLQ99685 303 aa20.15■□□□□ 0.82
CHFR-218ENST00000540963 CMSS1Q9BQ75 279 aaKnown RBP20.15■□□□□ 0.82
CHFR-218ENST00000540963 WFDC10AQ9H1F0 79 aa20.15■□□□□ 0.82
CHFR-218ENST00000540963 OR2D2Q9H210 308 aa20.15■□□□□ 0.82
CHFR-218ENST00000540963 C2orf70A6NJV1 201 aa20.14■□□□□ 0.81
CHFR-218ENST00000540963 LGALS9O00182 355 aa20.14■□□□□ 0.81
CHFR-218ENST00000540963 MPPED1O15442 326 aa20.14■□□□□ 0.81
CHFR-218ENST00000540963 APELAP0DMC3 54 aa20.14■□□□□ 0.81
CHFR-218ENST00000540963 FOLR2P14207 255 aa20.14■□□□□ 0.81
CHFR-218ENST00000540963 SSX1Q16384 188 aa20.14■□□□□ 0.81
CHFR-218ENST00000540963 GUCA2BQ16661 112 aa20.14■□□□□ 0.81
CHFR-218ENST00000540963 NECAP1Q8NC96 275 aa20.14■□□□□ 0.81
CHFR-218ENST00000540963 NUPR2A6NF83 97 aa20.13■□□□□ 0.81
CHFR-218ENST00000540963 TNXAQ16473 311 aa20.13■□□□□ 0.81
CHFR-218ENST00000540963 PLAC9Q5JTB6 97 aa20.13■□□□□ 0.81
CHFR-218ENST00000540963 ADTRPQ96IZ2 230 aa20.13■□□□□ 0.81
CHFR-218ENST00000540963 SPIN2AQ99865 258 aa20.13■□□□□ 0.81
CHFR-218ENST00000540963 SPIN2BQ9BPZ2 258 aa20.13■□□□□ 0.81
CHFR-218ENST00000540963 ST6GALNAC5Q9BVH7 336 aa20.13■□□□□ 0.81
CHFR-218ENST00000540963 CREBL2O60519 120 aaPredicted RBP20.12■□□□□ 0.81
CHFR-218ENST00000540963 ZNF45Q02386 682 aa20.12■□□□□ 0.81
CHFR-218ENST00000540963 C2orf76Q3KRA6 126 aa20.12■□□□□ 0.81
CHFR-218ENST00000540963 TTC9CQ8N5M4 171 aa20.12■□□□□ 0.81
CHFR-218ENST00000540963 ARHGAP5-AS1Q96IT6 56 aa20.12■□□□□ 0.81
CHFR-218ENST00000540963 OVOL2Q9BRP0 275 aa20.12■□□□□ 0.81
CHFR-218ENST00000540963 CCDC90BQ9GZT6 254 aa20.12■□□□□ 0.81
CHFR-218ENST00000540963 KCNK7Q9Y2U2 307 aa20.12■□□□□ 0.81
CHFR-218ENST00000540963 IZUMO2Q6UXV1 221 aa20.11■□□□□ 0.81
CHFR-218ENST00000540963 OSR1Q8TAX0 266 aaPredicted RBP20.11■□□□□ 0.81
CHFR-218ENST00000540963 WDR89Q96FK6 387 aaPredicted RBP20.11■□□□□ 0.81
CHFR-218ENST00000540963 CABLES2Q9BTV7 478 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms