RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 GAPDHP04406 335 aaKnown RBP6.87□□□□□ -1.31
CHD4-208ENST00000540960 RRASP10301 218 aa6.87□□□□□ -1.31
CHD4-208ENST00000540960 DAOP14920 347 aa6.87□□□□□ -1.31
CHD4-208ENST00000540960 MDKP21741 143 aaPredicted RBP6.87□□□□□ -1.31
CHD4-208ENST00000540960 GLIPR1P48060 266 aa6.87□□□□□ -1.31
CHD4-208ENST00000540960 EFNA4P52798 201 aa6.87□□□□□ -1.31
CHD4-208ENST00000540960 AKR1C2P52895 323 aa6.87□□□□□ -1.31
CHD4-208ENST00000540960 LOXL3P58215 753 aa6.87□□□□□ -1.31
CHD4-208ENST00000540960 TAS2R30P59541 319 aa6.87□□□□□ -1.31
CHD4-208ENST00000540960 RPL23AP62750 156 aaKnown RBP6.87□□□□□ -1.31
CHD4-208ENST00000540960 CCL8P80075 99 aa6.87□□□□□ -1.31
CHD4-208ENST00000540960 BAXQ07812 192 aa6.87□□□□□ -1.31
CHD4-208ENST00000540960 SWI5Q1ZZU3 235 aa6.87□□□□□ -1.31
CHD4-208ENST00000540960 SP6Q3SY56 376 aa6.87□□□□□ -1.31
CHD4-208ENST00000540960 SELENOHQ8IZQ5 122 aaKnown RBP6.87□□□□□ -1.31
CHD4-208ENST00000540960 OR8H3Q8N146 312 aa6.87□□□□□ -1.31
CHD4-208ENST00000540960 DRAM1Q8N682 238 aa6.87□□□□□ -1.31
CHD4-208ENST00000540960 SLC35G3Q8N808 338 aa6.87□□□□□ -1.31
CHD4-208ENST00000540960 C8orf31Q8N9H6 132 aa6.87□□□□□ -1.31
CHD4-208ENST00000540960 LINC01356Q8N9X3 169 aa6.87□□□□□ -1.31
CHD4-208ENST00000540960 OR51H1Q8NH63 302 aa6.87□□□□□ -1.31
CHD4-208ENST00000540960 OR1L1Q8NH94 360 aa6.87□□□□□ -1.31
CHD4-208ENST00000540960 STOML3Q8TAV4 291 aa6.87□□□□□ -1.31
CHD4-208ENST00000540960 CCL17Q92583 94 aa6.87□□□□□ -1.31
CHD4-208ENST00000540960 RAB1CQ92928 201 aa6.87□□□□□ -1.31
CHD4-208ENST00000540960 CIB3Q96Q77 187 aaPredicted RBP6.87□□□□□ -1.31
CHD4-208ENST00000540960 CLCC1Q96S66 551 aa6.87□□□□□ -1.31
CHD4-208ENST00000540960 S1PR3Q99500 378 aa6.87□□□□□ -1.31
CHD4-208ENST00000540960 PIMREGQ9BSJ6 248 aa6.87□□□□□ -1.31
CHD4-208ENST00000540960 BPESC1Q9GZL8 116 aa6.87□□□□□ -1.31
CHD4-208ENST00000540960 SLC25A10Q9UBX3 287 aaPredicted RBP6.87□□□□□ -1.31
CHD4-208ENST00000540960 SESN1Q9Y6P5 492 aa6.87□□□□□ -1.31
CHD4-208ENST00000540960 SACSQ9NZJ4 4579 aa6.86□□□□□ -1.31
CHD4-208ENST00000540960 IGKV1D-13A0A0B4J2D9 117 aa6.86□□□□□ -1.31
CHD4-208ENST00000540960 IGHV3-64DA0A0J9YX35 117 aa6.86□□□□□ -1.31
CHD4-208ENST00000540960 RNF222A6NCQ9 220 aa6.86□□□□□ -1.31
CHD4-208ENST00000540960 RAB29O14966 203 aa6.86□□□□□ -1.31
CHD4-208ENST00000540960 ATP6V1G1O75348 118 aa6.86□□□□□ -1.31
CHD4-208ENST00000540960 CYB5R3P00387 301 aaPredicted RBP6.86□□□□□ -1.31
CHD4-208ENST00000540960 AVPP01185 164 aa6.86□□□□□ -1.31
CHD4-208ENST00000540960 RBP4P02753 201 aa6.86□□□□□ -1.31
CHD4-208ENST00000540960 IGKV1-13P0DP09 117 aa6.86□□□□□ -1.31
CHD4-208ENST00000540960 IL3RAP26951 378 aa6.86□□□□□ -1.31
CHD4-208ENST00000540960 RPL12P30050 165 aaKnown RBP6.86□□□□□ -1.31
CHD4-208ENST00000540960 CD80P33681 288 aa6.86□□□□□ -1.31
CHD4-208ENST00000540960 THBS3P49746 956 aa6.86□□□□□ -1.31
CHD4-208ENST00000540960 PDLIM4P50479 330 aa6.86□□□□□ -1.31
CHD4-208ENST00000540960 ERVK-16P61578 105 aa6.86□□□□□ -1.31
CHD4-208ENST00000540960 RPP30P78346 268 aaKnown RBP6.86□□□□□ -1.31
CHD4-208ENST00000540960 RAB32Q13637 225 aa6.86□□□□□ -1.31
CHD4-208ENST00000540960 ZNF266Q14584 549 aa6.86□□□□□ -1.31
CHD4-208ENST00000540960 MORN2Q502X0 79 aa6.86□□□□□ -1.31
CHD4-208ENST00000540960 Q5BKY6 102 aa6.86□□□□□ -1.31
CHD4-208ENST00000540960 DHRS7BQ6IAN0 325 aaPredicted RBP6.86□□□□□ -1.31
CHD4-208ENST00000540960 FAM71F2Q6NXP2 309 aa6.86□□□□□ -1.31
CHD4-208ENST00000540960 LYZL2Q7Z4W2 148 aa6.86□□□□□ -1.31
CHD4-208ENST00000540960 PDZD9Q8IXQ8 264 aa6.86□□□□□ -1.31
CHD4-208ENST00000540960 OR13A1Q8NGR1 328 aa6.86□□□□□ -1.31
CHD4-208ENST00000540960 OR1S1Q8NH92 325 aa6.86□□□□□ -1.31
CHD4-208ENST00000540960 TNFRSF14Q92956 283 aa6.86□□□□□ -1.31
CHD4-208ENST00000540960 OR10C1Q96KK4 312 aa6.86□□□□□ -1.31
CHD4-208ENST00000540960 GAFA1Q96PS6 74 aa6.86□□□□□ -1.31
CHD4-208ENST00000540960 TP53RKQ96S44 253 aa6.86□□□□□ -1.31
CHD4-208ENST00000540960 RNF126Q9BV68 326 aa6.86□□□□□ -1.31
CHD4-208ENST00000540960 ZNF471Q9BX82 626 aaPredicted RBP6.86□□□□□ -1.31
CHD4-208ENST00000540960 OR2D2Q9H210 308 aa6.86□□□□□ -1.31
CHD4-208ENST00000540960 HEXA-AS1Q9H8Q6 139 aa6.86□□□□□ -1.31
CHD4-208ENST00000540960 MED9Q9NWA0 146 aa6.86□□□□□ -1.31
CHD4-208ENST00000540960 GFOD1Q9NXC2 390 aa6.86□□□□□ -1.31
CHD4-208ENST00000540960 IDI2-AS1Q9NZ38 188 aa6.86□□□□□ -1.31
CHD4-208ENST00000540960 OR1A1Q9P1Q5 309 aa6.86□□□□□ -1.31
CHD4-208ENST00000540960 MIOXQ9UGB7 285 aa6.86□□□□□ -1.31
CHD4-208ENST00000540960 PFDN2Q9UHV9 154 aa6.86□□□□□ -1.31
CHD4-208ENST00000540960 MMP24Q9Y5R2 645 aa6.86□□□□□ -1.31
CHD4-208ENST00000540960 HERC2O95714 4834 aa6.86□□□□□ -1.31
CHD4-208ENST00000540960 PLXNB1O43157 2135 aa6.85□□□□□ -1.31
CHD4-208ENST00000540960 DNAH1Q9P2D7 4330 aa6.85□□□□□ -1.31
CHD4-208ENST00000540960 IGHV3OR15-7A0A075B7D8 119 aa6.85□□□□□ -1.31
CHD4-208ENST00000540960 LINC00862A6NCI5 91 aa6.85□□□□□ -1.31
CHD4-208ENST00000540960 TOR1AO14656 332 aa6.85□□□□□ -1.31
CHD4-208ENST00000540960 DFFBO76075 338 aa6.85□□□□□ -1.31
CHD4-208ENST00000540960 TSPAN15O95858 294 aa6.85□□□□□ -1.31
CHD4-208ENST00000540960 SCGB1D2O95969 90 aa6.85□□□□□ -1.31
CHD4-208ENST00000540960 NDUFB7P17568 137 aa6.85□□□□□ -1.31
CHD4-208ENST00000540960 HTR2BP41595 481 aa6.85□□□□□ -1.31
CHD4-208ENST00000540960 CEBPDP49716 269 aaPredicted RBP6.85□□□□□ -1.31
CHD4-208ENST00000540960 RAB5CP51148 216 aa6.85□□□□□ -1.31
CHD4-208ENST00000540960 DVL1P1P54792 670 aaPredicted RBP6.85□□□□□ -1.31
CHD4-208ENST00000540960 TMEM33P57088 247 aa6.85□□□□□ -1.31
CHD4-208ENST00000540960 RPL31P62899 125 aaKnown RBP6.85□□□□□ -1.31
CHD4-208ENST00000540960 ID3Q02535 119 aa6.85□□□□□ -1.31
CHD4-208ENST00000540960 EXOSC2Q13868 293 aaKnown RBP6.85□□□□□ -1.31
CHD4-208ENST00000540960 TMEM155Q4W5P6 130 aa6.85□□□□□ -1.31
CHD4-208ENST00000540960 NMSQ5H8A3 153 aa6.85□□□□□ -1.31
CHD4-208ENST00000540960 STX12Q86Y82 276 aa6.85□□□□□ -1.31
CHD4-208ENST00000540960 BAP18Q8IXM2 172 aa6.85□□□□□ -1.31
CHD4-208ENST00000540960 ZNRF1Q8ND25 227 aa6.85□□□□□ -1.31
CHD4-208ENST00000540960 DEFB108BQ8NET1 73 aa6.85□□□□□ -1.31
CHD4-208ENST00000540960 OR52L2PQ8NGH6 319 aa6.85□□□□□ -1.31
CHD4-208ENST00000540960 OR4D5Q8NGN0 318 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms