RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 IGKV1-16P04430 117 aa9.99□□□□□ -0.81
AP003559.1-201ENST00000540906 MYOD1P15172 320 aa9.99□□□□□ -0.81
AP003559.1-201ENST00000540906 THBS3P49746 956 aa9.99□□□□□ -0.81
AP003559.1-201ENST00000540906 VAMP2P63027 116 aa9.99□□□□□ -0.81
AP003559.1-201ENST00000540906 TAGLNQ01995 201 aaKnown RBP9.99□□□□□ -0.81
AP003559.1-201ENST00000540906 ARL16Q0P5N6 197 aa9.99□□□□□ -0.81
AP003559.1-201ENST00000540906 GPR157Q5UAW9 335 aa9.99□□□□□ -0.81
AP003559.1-201ENST00000540906 H2BFWTQ7Z2G1 175 aa9.99□□□□□ -0.81
AP003559.1-201ENST00000540906 BAP18Q8IXM2 172 aa9.99□□□□□ -0.81
AP003559.1-201ENST00000540906 ZNF525Q8N782 197 aa9.99□□□□□ -0.81
AP003559.1-201ENST00000540906 LY6G5BQ8NDX9 201 aa9.99□□□□□ -0.81
AP003559.1-201ENST00000540906 C8orf46Q8TAG6 207 aa9.99□□□□□ -0.81
AP003559.1-201ENST00000540906 ZNF596Q8TC21 504 aa9.99□□□□□ -0.81
AP003559.1-201ENST00000540906 ZDHHC16Q969W1 377 aa9.99□□□□□ -0.81
AP003559.1-201ENST00000540906 PATZ1Q9HBE1 687 aaKnown RBP9.99□□□□□ -0.81
AP003559.1-201ENST00000540906 COA4Q9NYJ1 87 aa9.99□□□□□ -0.81
AP003559.1-201ENST00000540906 MIOXQ9UGB7 285 aa9.99□□□□□ -0.81
AP003559.1-201ENST00000540906 TENM4Q6N022 2769 aa9.99□□□□□ -0.81
AP003559.1-201ENST00000540906 A0A087X0M5 115 aa9.98□□□□□ -0.81
AP003559.1-201ENST00000540906 PPIAL4CA0A0B4J2A2 164 aa9.98□□□□□ -0.81
AP003559.1-201ENST00000540906 A0A1B0GX30 115 aa9.98□□□□□ -0.81
AP003559.1-201ENST00000540906 SRRM4A7MD48 611 aaKnown RBP9.98□□□□□ -0.81
AP003559.1-201ENST00000540906 TOR1AO14656 332 aa9.98□□□□□ -0.81
AP003559.1-201ENST00000540906 RBFOX2O43251 390 aaKnown RBP eCLIP9.98□□□□□ -0.81
AP003559.1-201ENST00000540906 TXNL1O43396 289 aa9.98□□□□□ -0.81
AP003559.1-201ENST00000540906 PPIAL4GP0DN37 164 aa9.98□□□□□ -0.81
AP003559.1-201ENST00000540906 TPT1P13693 172 aaKnown RBP9.98□□□□□ -0.81
AP003559.1-201ENST00000540906 DYNLT3P51808 116 aa9.98□□□□□ -0.81
AP003559.1-201ENST00000540906 EFNA4P52798 201 aa9.98□□□□□ -0.81
AP003559.1-201ENST00000540906 TNFRSF9Q07011 255 aa9.98□□□□□ -0.81
AP003559.1-201ENST00000540906 CLINT1Q14677 625 aa9.98□□□□□ -0.81
AP003559.1-201ENST00000540906 Q8N7P7 452 aa9.98□□□□□ -0.81
AP003559.1-201ENST00000540906 ST6GALNAC6Q969X2 333 aa9.98□□□□□ -0.81
AP003559.1-201ENST00000540906 TIMD4Q96H15 378 aa9.98□□□□□ -0.81
AP003559.1-201ENST00000540906 TMEM133Q9H2Q1 129 aa9.98□□□□□ -0.81
AP003559.1-201ENST00000540906 HSPB7Q9UBY9 170 aa9.98□□□□□ -0.81
AP003559.1-201ENST00000540906 SESN1Q9Y6P5 492 aa9.98□□□□□ -0.81
AP003559.1-201ENST00000540906 HELZ2Q9BYK8 2649 aaKnown RBP9.98□□□□□ -0.81
AP003559.1-201ENST00000540906 LRRK2Q5S007 2527 aa9.98□□□□□ -0.81
AP003559.1-201ENST00000540906 IGHV4-39P01824 125 aa9.98□□□□□ -0.81
AP003559.1-201ENST00000540906 ZFP36P26651 326 aaKnown RBP9.98□□□□□ -0.81
AP003559.1-201ENST00000540906 GPR6P46095 362 aaPredicted RBP9.98□□□□□ -0.81
AP003559.1-201ENST00000540906 UBE2KP61086 200 aa9.98□□□□□ -0.81
AP003559.1-201ENST00000540906 RPS16P62249 146 aaKnown RBP9.98□□□□□ -0.81
AP003559.1-201ENST00000540906 ABHD12Q8N2K0 398 aa9.98□□□□□ -0.81
AP003559.1-201ENST00000540906 LINC00311Q8N616 119 aa9.98□□□□□ -0.81
AP003559.1-201ENST00000540906 TMEM217Q8N7C4 229 aa9.98□□□□□ -0.81
AP003559.1-201ENST00000540906 CD300LFQ8TDQ1 290 aa9.98□□□□□ -0.81
AP003559.1-201ENST00000540906 OR4C12Q96R67 309 aa9.98□□□□□ -0.81
AP003559.1-201ENST00000540906 CITED4Q96RK1 184 aa9.98□□□□□ -0.81
AP003559.1-201ENST00000540906 ARV1Q9H2C2 271 aa9.98□□□□□ -0.81
AP003559.1-201ENST00000540906 BARX1Q9HBU1 254 aaPredicted RBP9.98□□□□□ -0.81
AP003559.1-201ENST00000540906 TMEM140Q9NV12 185 aa9.98□□□□□ -0.81
AP003559.1-201ENST00000540906 PRELID3BQ9Y3B1 194 aa9.98□□□□□ -0.81
AP003559.1-201ENST00000540906 TAAR5O14804 337 aa9.97□□□□□ -0.81
AP003559.1-201ENST00000540906 FBXO24O75426 580 aa9.97□□□□□ -0.81
AP003559.1-201ENST00000540906 FAM157CP0CG43 387 aa9.97□□□□□ -0.81
AP003559.1-201ENST00000540906 MMP9P14780 707 aa9.97□□□□□ -0.81
AP003559.1-201ENST00000540906 PVALBP20472 110 aaPredicted RBP9.97□□□□□ -0.81
AP003559.1-201ENST00000540906 COX7A1P24310 79 aa9.97□□□□□ -0.81
AP003559.1-201ENST00000540906 RELBQ01201 579 aa9.97□□□□□ -0.81
AP003559.1-201ENST00000540906 LDLRAD2Q5SZI1 272 aa9.97□□□□□ -0.81
AP003559.1-201ENST00000540906 COMMD7Q86VX2 200 aa9.97□□□□□ -0.81
AP003559.1-201ENST00000540906 OR4S2Q8NH73 311 aa9.97□□□□□ -0.81
AP003559.1-201ENST00000540906 OR9G1Q8NH87 305 aa9.97□□□□□ -0.81
AP003559.1-201ENST00000540906 NRGNQ92686 78 aa9.97□□□□□ -0.81
AP003559.1-201ENST00000540906 REG4Q9BYZ8 158 aa9.97□□□□□ -0.81
AP003559.1-201ENST00000540906 SH3BGRL3Q9H299 93 aa9.97□□□□□ -0.81
AP003559.1-201ENST00000540906 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.97□□□□□ -0.81
AP003559.1-201ENST00000540906 SLC35D1Q9NTN3 355 aa9.97□□□□□ -0.81
AP003559.1-201ENST00000540906 PSENENQ9NZ42 101 aa9.97□□□□□ -0.81
AP003559.1-201ENST00000540906 FASNP49327 2511 aaKnown RBP9.97□□□□□ -0.81
AP003559.1-201ENST00000540906 IGHV2-26A0A0B4J1V2 119 aa9.96□□□□□ -0.81
AP003559.1-201ENST00000540906 PIGBOS1A0A0B4J2F0 54 aa9.96□□□□□ -0.81
AP003559.1-201ENST00000540906 ANKRD34BA5PLL1 514 aa9.96□□□□□ -0.81
AP003559.1-201ENST00000540906 H0YJW9 148 aa9.96□□□□□ -0.81
AP003559.1-201ENST00000540906 GAPDHP04406 335 aaKnown RBP9.96□□□□□ -0.81
AP003559.1-201ENST00000540906 METTL15P1P0C7V9 234 aa9.96□□□□□ -0.81
AP003559.1-201ENST00000540906 KIR2DS2P43631 304 aa9.96□□□□□ -0.81
AP003559.1-201ENST00000540906 RAB14P61106 215 aa9.96□□□□□ -0.81
AP003559.1-201ENST00000540906 GNB2P62879 340 aa9.96□□□□□ -0.81
AP003559.1-201ENST00000540906 TLE4Q04727 773 aa9.96□□□□□ -0.81
AP003559.1-201ENST00000540906 C8orf31Q8N9H6 132 aa9.96□□□□□ -0.81
AP003559.1-201ENST00000540906 OR5C1Q8NGR4 320 aa9.96□□□□□ -0.81
AP003559.1-201ENST00000540906 OR10X1Q8NGY0 326 aa9.96□□□□□ -0.81
AP003559.1-201ENST00000540906 PHYHIPLQ96FC7 376 aa9.96□□□□□ -0.81
AP003559.1-201ENST00000540906 SMIM8Q96KF7 97 aa9.96□□□□□ -0.81
AP003559.1-201ENST00000540906 RAB40CQ96S21 281 aa9.96□□□□□ -0.81
AP003559.1-201ENST00000540906 NABP2Q9BQ15 211 aa9.96□□□□□ -0.81
AP003559.1-201ENST00000540906 ONECUT1Q9UBC0 465 aa9.96□□□□□ -0.81
AP003559.1-201ENST00000540906 KLF2Q9Y5W3 355 aaPredicted RBP9.96□□□□□ -0.81
AP003559.1-201ENST00000540906 IGLV1-47P01700 117 aa9.96□□□□□ -0.82
AP003559.1-201ENST00000540906 NQO2P16083 231 aa9.96□□□□□ -0.82
AP003559.1-201ENST00000540906 ARF6P62330 175 aa9.96□□□□□ -0.82
AP003559.1-201ENST00000540906 KLRD1Q13241 179 aa9.96□□□□□ -0.82
AP003559.1-201ENST00000540906 OR4A47Q6IF82 309 aa9.96□□□□□ -0.82
AP003559.1-201ENST00000540906 ADTRPQ96IZ2 230 aa9.96□□□□□ -0.82
AP003559.1-201ENST00000540906 RITA1Q96K30 269 aa9.96□□□□□ -0.82
AP003559.1-201ENST00000540906 SSBP3Q9BWW4 388 aaPredicted RBP9.96□□□□□ -0.82
AP003559.1-201ENST00000540906 BPESC1Q9GZL8 116 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms