RNA–Protein interactions for RNA: ENST00000540746.6

LSM14A-202, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2 BASIC

Gene LSM14A, Length 2,152 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-202ENST00000540746 PPP1R35Q8TAP8 253 aa17.34■□□□□ 0.37
LSM14A-202ENST00000540746 GCM1Q9NP62 436 aa17.34■□□□□ 0.37
LSM14A-202ENST00000540746 KALRNO60229 2985 aa17.34■□□□□ 0.37
LSM14A-202ENST00000540746 TET2Q6N021 2002 aaPredicted RBP17.34■□□□□ 0.37
LSM14A-202ENST00000540746 ZNF727A8MUV8 499 aa17.33■□□□□ 0.37
LSM14A-202ENST00000540746 SLC31A2O15432 143 aa17.33■□□□□ 0.37
LSM14A-202ENST00000540746 BCL2P10415 239 aa17.33■□□□□ 0.37
LSM14A-202ENST00000540746 AGAP20933 346 aa17.33■□□□□ 0.37
LSM14A-202ENST00000540746 RPL35P42766 123 aaKnown RBP17.33■□□□□ 0.37
LSM14A-202ENST00000540746 GATA4P43694 442 aa17.33■□□□□ 0.37
LSM14A-202ENST00000540746 KRTCAP3Q53RY4 240 aa17.33■□□□□ 0.37
LSM14A-202ENST00000540746 ACSM6Q6P461 480 aa17.33■□□□□ 0.37
LSM14A-202ENST00000540746 FAM234AQ9H0X4 552 aa17.33■□□□□ 0.37
LSM14A-202ENST00000540746 M0R1X1 148 aa17.33■□□□□ 0.36
LSM14A-202ENST00000540746 IGHV1-46P01743 117 aa17.33■□□□□ 0.36
LSM14A-202ENST00000540746 OR2B8PP59922 312 aa17.33■□□□□ 0.36
LSM14A-202ENST00000540746 RAB5BP61020 215 aa17.33■□□□□ 0.36
LSM14A-202ENST00000540746 DLK1P80370 383 aa17.33■□□□□ 0.36
LSM14A-202ENST00000540746 FAM180AQ6UWF9 173 aa17.33■□□□□ 0.36
LSM14A-202ENST00000540746 FAM222BQ8WU58 562 aa17.33■□□□□ 0.36
LSM14A-202ENST00000540746 LEAP2Q969E1 77 aa17.33■□□□□ 0.36
LSM14A-202ENST00000540746 PINX1Q96BK5 328 aaKnown RBP17.33■□□□□ 0.36
LSM14A-202ENST00000540746 CALYQ9NYX4 217 aa17.33■□□□□ 0.36
LSM14A-202ENST00000540746 CISD1Q9NZ45 108 aaKnown RBP17.33■□□□□ 0.36
LSM14A-202ENST00000540746 TIMM9Q9Y5J7 89 aa17.33■□□□□ 0.36
LSM14A-202ENST00000540746 CEBPZOSA8MTT3 80 aa17.32■□□□□ 0.36
LSM14A-202ENST00000540746 OR2C1O95371 312 aa17.32■□□□□ 0.36
LSM14A-202ENST00000540746 CD40P25942 277 aa17.32■□□□□ 0.36
LSM14A-202ENST00000540746 NBL1P41271 181 aa17.32■□□□□ 0.36
LSM14A-202ENST00000540746 HOXA1P49639 335 aaPredicted RBP17.32■□□□□ 0.36
LSM14A-202ENST00000540746 AKR1D1P51857 326 aa17.32■□□□□ 0.36
LSM14A-202ENST00000540746 C17orf58Q2M2W7 97 aa17.32■□□□□ 0.36
LSM14A-202ENST00000540746 FAM90A2PQ658T7 463 aa17.32■□□□□ 0.36
LSM14A-202ENST00000540746 VKORC1L1Q8N0U8 176 aa17.32■□□□□ 0.36
LSM14A-202ENST00000540746 OR10P1Q8NGE3 313 aa17.32■□□□□ 0.36
LSM14A-202ENST00000540746 OR10G4Q8NGN3 311 aa17.32■□□□□ 0.36
LSM14A-202ENST00000540746 TMEM147Q9BVK8 224 aa17.32■□□□□ 0.36
LSM14A-202ENST00000540746 MAP1LC3B2A6NCE7 125 aa17.32■□□□□ 0.36
LSM14A-202ENST00000540746 C1orf196B1AJZ1 125 aa17.32■□□□□ 0.36
LSM14A-202ENST00000540746 TAGLN2P37802 199 aaKnown RBP17.32■□□□□ 0.36
LSM14A-202ENST00000540746 TFF3Q07654 80 aa17.32■□□□□ 0.36
LSM14A-202ENST00000540746 SSX9Q7RTT3 188 aa17.32■□□□□ 0.36
LSM14A-202ENST00000540746 TGIF2LYQ8IUE0 185 aa17.32■□□□□ 0.36
LSM14A-202ENST00000540746 CIB3Q96Q77 187 aaPredicted RBP17.32■□□□□ 0.36
LSM14A-202ENST00000540746 MAP1LC3BQ9GZQ8 125 aa17.32■□□□□ 0.36
LSM14A-202ENST00000540746 DYSFO75923 2080 aa17.31■□□□□ 0.36
LSM14A-202ENST00000540746 RAB11AP62491 216 aa17.31■□□□□ 0.36
LSM14A-202ENST00000540746 ATP6V1FQ16864 119 aa17.31■□□□□ 0.36
LSM14A-202ENST00000540746 CA5BP1Q8WTZ4 195 aa17.31■□□□□ 0.36
LSM14A-202ENST00000540746 NIPSNAP3BQ9BS92 247 aa17.31■□□□□ 0.36
LSM14A-202ENST00000540746 A0A1W2PPE3 182 aa17.3■□□□□ 0.36
LSM14A-202ENST00000540746 C15orf62A8K5M9 175 aa17.3■□□□□ 0.36
LSM14A-202ENST00000540746 CYB5R3P00387 301 aaPredicted RBP17.3■□□□□ 0.36
LSM14A-202ENST00000540746 HPRT1P00492 218 aa17.3■□□□□ 0.36
LSM14A-202ENST00000540746 MAS1LP35410 378 aa17.3■□□□□ 0.36
LSM14A-202ENST00000540746 TNFAIP6P98066 277 aaPredicted RBP17.3■□□□□ 0.36
LSM14A-202ENST00000540746 AARDQ4LEZ3 155 aa17.3■□□□□ 0.36
LSM14A-202ENST00000540746 TVP23CQ96ET8 276 aa17.3■□□□□ 0.36
LSM14A-202ENST00000540746 OR6C3Q9NZP0 311 aa17.3■□□□□ 0.36
LSM14A-202ENST00000540746 RNF7Q9UBF6 113 aa17.3■□□□□ 0.36
LSM14A-202ENST00000540746 FGF7P21781 194 aa17.3■□□□□ 0.36
LSM14A-202ENST00000540746 SNRPEP62304 92 aaKnown RBP17.3■□□□□ 0.36
LSM14A-202ENST00000540746 VWC2Q2TAL6 325 aa17.3■□□□□ 0.36
LSM14A-202ENST00000540746 ADAM5Q6NVV9 412 aa17.3■□□□□ 0.36
LSM14A-202ENST00000540746 DOLPP1Q86YN1 238 aa17.3■□□□□ 0.36
LSM14A-202ENST00000540746 ZNF561Q8N587 486 aa17.3■□□□□ 0.36
LSM14A-202ENST00000540746 ABHD17AQ96GS6 310 aa17.3■□□□□ 0.36
LSM14A-202ENST00000540746 DCAF16Q9NXF7 216 aa17.3■□□□□ 0.36
LSM14A-202ENST00000540746 IL19Q9UHD0 177 aa17.3■□□□□ 0.36
LSM14A-202ENST00000540746 A0A0G2JNJ9 132 aa17.29■□□□□ 0.36
LSM14A-202ENST00000540746 MDKP21741 143 aaPredicted RBP17.29■□□□□ 0.36
LSM14A-202ENST00000540746 STUMQ69YW2 141 aa17.29■□□□□ 0.36
LSM14A-202ENST00000540746 TCF23Q7RTU1 214 aa17.29■□□□□ 0.36
LSM14A-202ENST00000540746 DEFB108BQ8NET1 73 aa17.29■□□□□ 0.36
LSM14A-202ENST00000540746 SDSLQ96GA7 329 aa17.29■□□□□ 0.36
LSM14A-202ENST00000540746 Q9UFV3 132 aa17.29■□□□□ 0.36
LSM14A-202ENST00000540746 HMGB3O15347 200 aaKnown RBP17.29■□□□□ 0.36
LSM14A-202ENST00000540746 CT45A1Q5HYN5 189 aa17.29■□□□□ 0.36
LSM14A-202ENST00000540746 SLC35E3Q7Z769 313 aa17.29■□□□□ 0.36
LSM14A-202ENST00000540746 CT45A3Q8NHU0 189 aa17.29■□□□□ 0.36
LSM14A-202ENST00000540746 NPCDR1Q9BY65 106 aa17.29■□□□□ 0.36
LSM14A-202ENST00000540746 A0A087WWC5 75 aa17.28■□□□□ 0.36
LSM14A-202ENST00000540746 TRAV3A0A0B4J244 114 aa17.28■□□□□ 0.36
LSM14A-202ENST00000540746 TDGF1P3P51864 188 aa17.28■□□□□ 0.36
LSM14A-202ENST00000540746 GNB2P62879 340 aa17.28■□□□□ 0.36
LSM14A-202ENST00000540746 MRGPRGQ86SM5 289 aa17.28■□□□□ 0.36
LSM14A-202ENST00000540746 FAM216AQ8WUB2 273 aa17.28■□□□□ 0.36
LSM14A-202ENST00000540746 DDB2Q92466 427 aa17.28■□□□□ 0.36
LSM14A-202ENST00000540746 LHX4Q969G2 390 aa17.28■□□□□ 0.36
LSM14A-202ENST00000540746 GAFA1Q96PS6 74 aa17.28■□□□□ 0.36
LSM14A-202ENST00000540746 SLC39A9Q9NUM3 307 aa17.28■□□□□ 0.36
LSM14A-202ENST00000540746 YLPM1P49750 1951 aaKnown RBP17.28■□□□□ 0.36
LSM14A-202ENST00000540746 MKRN2OSH3BPM6 223 aa17.28■□□□□ 0.36
LSM14A-202ENST00000540746 RBFOX2O43251 390 aaKnown RBP eCLIP17.28■□□□□ 0.36
LSM14A-202ENST00000540746 IFNA17P01571 189 aa17.28■□□□□ 0.36
LSM14A-202ENST00000540746 SELENOVP59797 346 aa17.28■□□□□ 0.36
LSM14A-202ENST00000540746 PRAMEF5Q5TYX0 476 aa17.28■□□□□ 0.36
LSM14A-202ENST00000540746 HEPN1Q6WQI6 88 aa17.28■□□□□ 0.36
LSM14A-202ENST00000540746 MALSU1Q96EH3 234 aa17.28■□□□□ 0.36
LSM14A-202ENST00000540746 TMPRSS5Q9H3S3 457 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms