RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 MND1Q9BWT6 205 aa9.45□□□□□ -0.9
COPS7A-211ENST00000540408 OR2D2Q9H210 308 aa9.45□□□□□ -0.9
COPS7A-211ENST00000540408 SRD5A3Q9H8P0 318 aa9.45□□□□□ -0.9
COPS7A-211ENST00000540408 PLCXD1Q9NUJ7 323 aa9.45□□□□□ -0.9
COPS7A-211ENST00000540408 SDHAF2Q9NX18 166 aa9.45□□□□□ -0.9
COPS7A-211ENST00000540408 EPPK1P58107 5090 aaKnown RBP9.45□□□□□ -0.9
COPS7A-211ENST00000540408 BET1O15155 118 aa9.44□□□□□ -0.9
COPS7A-211ENST00000540408 CD3GP09693 182 aa9.44□□□□□ -0.9
COPS7A-211ENST00000540408 CD37P11049 281 aa9.44□□□□□ -0.9
COPS7A-211ENST00000540408 RHOGP84095 191 aa9.44□□□□□ -0.9
COPS7A-211ENST00000540408 EXOSC2Q13868 293 aaKnown RBP9.44□□□□□ -0.9
COPS7A-211ENST00000540408 P2RY14Q15391 338 aa9.44□□□□□ -0.9
COPS7A-211ENST00000540408 PACRGLQ8N7B6 248 aa9.44□□□□□ -0.9
COPS7A-211ENST00000540408 OR56B1Q8NGI3 324 aa9.44□□□□□ -0.9
COPS7A-211ENST00000540408 ARHGAP5-AS1Q96IT6 56 aa9.44□□□□□ -0.9
COPS7A-211ENST00000540408 ADTRPQ96IZ2 230 aa9.44□□□□□ -0.9
COPS7A-211ENST00000540408 SPIN2AQ99865 258 aa9.44□□□□□ -0.9
COPS7A-211ENST00000540408 SPIN2BQ9BPZ2 258 aa9.44□□□□□ -0.9
COPS7A-211ENST00000540408 CENPOQ9BU64 300 aa9.44□□□□□ -0.9
COPS7A-211ENST00000540408 PECRQ9BY49 303 aa9.44□□□□□ -0.9
COPS7A-211ENST00000540408 AKIP1Q9NQ31 210 aa9.44□□□□□ -0.9
COPS7A-211ENST00000540408 TECRQ9NZ01 308 aaKnown RBP9.44□□□□□ -0.9
COPS7A-211ENST00000540408 STARD9Q9P2P6 4700 aa9.44□□□□□ -0.9
COPS7A-211ENST00000540408 IGKV1-6A0A0C4DH72 117 aa9.43□□□□□ -0.9
COPS7A-211ENST00000540408 RBMY1BA6NDE4 496 aaKnown RBP9.43□□□□□ -0.9
COPS7A-211ENST00000540408 RBMY1EA6NEQ0 496 aaKnown RBP9.43□□□□□ -0.9
COPS7A-211ENST00000540408 SRRM4A7MD48 611 aaKnown RBP9.43□□□□□ -0.9
COPS7A-211ENST00000540408 ZNF785A8K8V0 405 aa9.43□□□□□ -0.9
COPS7A-211ENST00000540408 BMPR1BO00238 502 aa9.43□□□□□ -0.9
COPS7A-211ENST00000540408 SLC17A2O00624 439 aa9.43□□□□□ -0.9
COPS7A-211ENST00000540408 FABP7O15540 132 aa9.43□□□□□ -0.9
COPS7A-211ENST00000540408 CD7P09564 240 aa9.43□□□□□ -0.9
COPS7A-211ENST00000540408 UCHL1P09936 223 aa9.43□□□□□ -0.9
COPS7A-211ENST00000540408 RBMY1DP0C7P1 496 aaKnown RBP9.43□□□□□ -0.9
COPS7A-211ENST00000540408 MAP2K4P45985 399 aa9.43□□□□□ -0.9
COPS7A-211ENST00000540408 TMEM50BP56557 158 aa9.43□□□□□ -0.9
COPS7A-211ENST00000540408 UBE2KP61086 200 aa9.43□□□□□ -0.9
COPS7A-211ENST00000540408 RAB11BQ15907 218 aa9.43□□□□□ -0.9
COPS7A-211ENST00000540408 PRSS8Q16651 343 aa9.43□□□□□ -0.9
COPS7A-211ENST00000540408 DEFB114Q30KQ6 69 aa9.43□□□□□ -0.9
COPS7A-211ENST00000540408 SLC16A13Q7RTY0 426 aa9.43□□□□□ -0.9
COPS7A-211ENST00000540408 SLC25A42Q86VD7 318 aa9.43□□□□□ -0.9
COPS7A-211ENST00000540408 SRSF12Q8WXF0 261 aaKnown RBP9.43□□□□□ -0.9
COPS7A-211ENST00000540408 ZNF230Q9UIE0 474 aaPredicted RBP9.43□□□□□ -0.9
COPS7A-211ENST00000540408 BIRC6Q9NR09 4857 aa9.43□□□□□ -0.9
COPS7A-211ENST00000540408 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.42□□□□□ -0.9
COPS7A-211ENST00000540408 DENRO43583 198 aaKnown RBP9.42□□□□□ -0.9
COPS7A-211ENST00000540408 ARL6IP5O75915 188 aa9.42□□□□□ -0.9
COPS7A-211ENST00000540408 KIR2DS2P43631 304 aa9.42□□□□□ -0.9
COPS7A-211ENST00000540408 SPHARQ15513 63 aa9.42□□□□□ -0.9
COPS7A-211ENST00000540408 MED22Q15528 200 aa9.42□□□□□ -0.9
COPS7A-211ENST00000540408 NECAP1Q8NC96 275 aa9.42□□□□□ -0.9
COPS7A-211ENST00000540408 OSR1Q8TAX0 266 aaPredicted RBP9.42□□□□□ -0.9
COPS7A-211ENST00000540408 GINS4Q9BRT9 223 aa9.42□□□□□ -0.9
COPS7A-211ENST00000540408 AK6Q9Y3D8 172 aaKnown RBP9.42□□□□□ -0.9
COPS7A-211ENST00000540408 TRBV6-7A0A0A0MS04 114 aa9.41□□□□□ -0.9
COPS7A-211ENST00000540408 TRBV9A0A0B4J1U6 114 aa9.41□□□□□ -0.9
COPS7A-211ENST00000540408 C2orf70A6NJV1 201 aa9.41□□□□□ -0.9
COPS7A-211ENST00000540408 FOXI3A8MTJ6 420 aaPredicted RBP9.41□□□□□ -0.9
COPS7A-211ENST00000540408 GGCTO75223 188 aaKnown RBP9.41□□□□□ -0.9
COPS7A-211ENST00000540408 RBMXL2O75526 392 aaKnown RBP9.41□□□□□ -0.9
COPS7A-211ENST00000540408 DIRAS3O95661 229 aa9.41□□□□□ -0.9
COPS7A-211ENST00000540408 CRYZL1O95825 349 aa9.41□□□□□ -0.9
COPS7A-211ENST00000540408 LY6G6CO95867 125 aa9.41□□□□□ -0.9
COPS7A-211ENST00000540408 PRH1P02810 166 aa9.41□□□□□ -0.9
COPS7A-211ENST00000540408 FOLR2P14207 255 aa9.41□□□□□ -0.9
COPS7A-211ENST00000540408 PSMD7P51665 324 aa9.41□□□□□ -0.9
COPS7A-211ENST00000540408 C15orf32Q32M92 178 aa9.41□□□□□ -0.9
COPS7A-211ENST00000540408 ANKRD55Q3KP44 614 aa9.41□□□□□ -0.9
COPS7A-211ENST00000540408 IGSF11Q5DX21 431 aa9.41□□□□□ -0.9
COPS7A-211ENST00000540408 IDO2Q6ZQW0 420 aa9.41□□□□□ -0.9
COPS7A-211ENST00000540408 MMD2Q8IY49 270 aa9.41□□□□□ -0.9
COPS7A-211ENST00000540408 TTC9CQ8N5M4 171 aa9.41□□□□□ -0.9
COPS7A-211ENST00000540408 UFD1Q92890 307 aa9.41□□□□□ -0.9
COPS7A-211ENST00000540408 DCUN1D5Q9BTE7 237 aa9.41□□□□□ -0.9
COPS7A-211ENST00000540408 DPPA5A6NC42 116 aa9.4□□□□□ -0.9
COPS7A-211ENST00000540408 PTGES3LE9PB15 166 aa9.4□□□□□ -0.9
COPS7A-211ENST00000540408 LGALS9O00182 355 aa9.4□□□□□ -0.9
COPS7A-211ENST00000540408 OR2J3O76001 311 aa9.4□□□□□ -0.9
COPS7A-211ENST00000540408 CDK1P06493 297 aa9.4□□□□□ -0.9
COPS7A-211ENST00000540408 GNAO1P09471 354 aa9.4□□□□□ -0.9
COPS7A-211ENST00000540408 GSTT2P0CG29 244 aa9.4□□□□□ -0.9
COPS7A-211ENST00000540408 GSTT2BP0CG30 244 aa9.4□□□□□ -0.9
COPS7A-211ENST00000540408 GADD45AP24522 165 aa9.4□□□□□ -0.9
COPS7A-211ENST00000540408 DUTP33316 252 aaKnown RBP9.4□□□□□ -0.9
COPS7A-211ENST00000540408 ZNF45Q02386 682 aa9.4□□□□□ -0.9
COPS7A-211ENST00000540408 CDK10Q15131 360 aa9.4□□□□□ -0.9
COPS7A-211ENST00000540408 TRAM1Q15629 374 aa9.4□□□□□ -0.9
COPS7A-211ENST00000540408 C2orf76Q3KRA6 126 aa9.4□□□□□ -0.9
COPS7A-211ENST00000540408 FAM106AQ4KMX7 169 aa9.4□□□□□ -0.9
COPS7A-211ENST00000540408 PLAC9Q5JTB6 97 aa9.4□□□□□ -0.9
COPS7A-211ENST00000540408 LIPKQ5VXJ0 399 aa9.4□□□□□ -0.9
COPS7A-211ENST00000540408 LINC00476Q8WZB0 136 aa9.4□□□□□ -0.9
COPS7A-211ENST00000540408 TMEM203Q969S6 136 aa9.4□□□□□ -0.9
COPS7A-211ENST00000540408 FAM3DQ96BQ1 224 aa9.4□□□□□ -0.9
COPS7A-211ENST00000540408 RAB3CQ96E17 227 aa9.4□□□□□ -0.9
COPS7A-211ENST00000540408 CABLES2Q9BTV7 478 aa9.4□□□□□ -0.9
COPS7A-211ENST00000540408 WFDC10AQ9H1F0 79 aa9.4□□□□□ -0.9
COPS7A-211ENST00000540408 ZNF430Q9H8G1 570 aaPredicted RBP9.4□□□□□ -0.9
COPS7A-211ENST00000540408 ZC4H2Q9NQZ6 224 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms