RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 PAGE4O60829 102 aa8.03□□□□□ -1.12
CTNNA1-243ENST00000540387 FRMD6-AS1P0C7T7 363 aa8.03□□□□□ -1.12
CTNNA1-243ENST00000540387 FTH1P19P0C7X4 201 aa8.03□□□□□ -1.12
CTNNA1-243ENST00000540387 FBLP22087 321 aaKnown RBP8.03□□□□□ -1.12
CTNNA1-243ENST00000540387 IER3P46695 156 aa8.03□□□□□ -1.12
CTNNA1-243ENST00000540387 FUT6P51993 359 aa8.03□□□□□ -1.12
CTNNA1-243ENST00000540387 ZNF90Q03938 601 aa8.03□□□□□ -1.12
CTNNA1-243ENST00000540387 IGFBP7Q16270 282 aa8.03□□□□□ -1.12
CTNNA1-243ENST00000540387 PHYHD1Q5SRE7 291 aa8.03□□□□□ -1.12
CTNNA1-243ENST00000540387 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.03□□□□□ -1.12
CTNNA1-243ENST00000540387 FAM19A2Q8N3H0 131 aa8.03□□□□□ -1.12
CTNNA1-243ENST00000540387 FAM222BQ8WU58 562 aa8.03□□□□□ -1.12
CTNNA1-243ENST00000540387 ST6GALNAC6Q969X2 333 aa8.03□□□□□ -1.12
CTNNA1-243ENST00000540387 GMPPAQ96IJ6 420 aaPredicted RBP8.03□□□□□ -1.12
CTNNA1-243ENST00000540387 STRADBQ9C0K7 418 aa8.03□□□□□ -1.12
CTNNA1-243ENST00000540387 WDR61Q9GZS3 305 aaKnown RBP8.03□□□□□ -1.12
CTNNA1-243ENST00000540387 SLC25A22Q9H936 323 aa8.03□□□□□ -1.12
CTNNA1-243ENST00000540387 TAAR3PQ9P1P4 343 aa8.03□□□□□ -1.12
CTNNA1-243ENST00000540387 AHCTF1Q8WYP5 2266 aa8.02□□□□□ -1.12
CTNNA1-243ENST00000540387 IGKV1-9A0A0C4DH69 117 aa8.02□□□□□ -1.13
CTNNA1-243ENST00000540387 MDFIC2A0A1B0GVS7 189 aa8.02□□□□□ -1.13
CTNNA1-243ENST00000540387 H0YJW9 148 aa8.02□□□□□ -1.13
CTNNA1-243ENST00000540387 TM4SF5O14894 197 aa8.02□□□□□ -1.13
CTNNA1-243ENST00000540387 TMPRSS2O15393 492 aa8.02□□□□□ -1.13
CTNNA1-243ENST00000540387 CD5LO43866 347 aa8.02□□□□□ -1.13
CTNNA1-243ENST00000540387 HAND1O96004 215 aa8.02□□□□□ -1.13
CTNNA1-243ENST00000540387 OTX1P32242 354 aaPredicted RBP8.02□□□□□ -1.13
CTNNA1-243ENST00000540387 UFSP1Q6NVU6 142 aa8.02□□□□□ -1.13
CTNNA1-243ENST00000540387 C19orf35Q6ZS72 473 aa8.02□□□□□ -1.13
CTNNA1-243ENST00000540387 SHISA6Q6ZSJ9 500 aa8.02□□□□□ -1.13
CTNNA1-243ENST00000540387 NEGR1Q7Z3B1 354 aa8.02□□□□□ -1.13
CTNNA1-243ENST00000540387 ZNF295-AS1Q8N0V1 137 aa8.02□□□□□ -1.13
CTNNA1-243ENST00000540387 ZNF525Q8N782 197 aa8.02□□□□□ -1.13
CTNNA1-243ENST00000540387 SSC4DQ8WTU2 575 aa8.02□□□□□ -1.13
CTNNA1-243ENST00000540387 BORCS7Q96B45 105 aa8.02□□□□□ -1.13
CTNNA1-243ENST00000540387 MYO7BQ6PIF6 2116 aa8.02□□□□□ -1.13
CTNNA1-243ENST00000540387 SNURFLB1AK76 121 aa8.02□□□□□ -1.13
CTNNA1-243ENST00000540387 SELENOVP59797 346 aa8.02□□□□□ -1.13
CTNNA1-243ENST00000540387 ARL16Q0P5N6 197 aa8.02□□□□□ -1.13
CTNNA1-243ENST00000540387 LRRC75BQ2VPJ9 315 aa8.02□□□□□ -1.13
CTNNA1-243ENST00000540387 NMSQ5H8A3 153 aa8.02□□□□□ -1.13
CTNNA1-243ENST00000540387 WDR82Q6UXN9 313 aa8.02□□□□□ -1.13
CTNNA1-243ENST00000540387 TXNIPQ9H3M7 391 aa8.02□□□□□ -1.13
CTNNA1-243ENST00000540387 SELENOKQ9Y6D0 94 aa8.02□□□□□ -1.13
CTNNA1-243ENST00000540387 SPTBN2O15020 2390 aa8.01□□□□□ -1.13
CTNNA1-243ENST00000540387 FER1L5A0AVI2 2057 aa8.01□□□□□ -1.13
CTNNA1-243ENST00000540387 ADAMTS20P59510 1910 aa8.01□□□□□ -1.13
CTNNA1-243ENST00000540387 A0A1W2PR80 420 aa8.01□□□□□ -1.13
CTNNA1-243ENST00000540387 TRAPPC2LH3BP13 241 aa8.01□□□□□ -1.13
CTNNA1-243ENST00000540387 SLC25A17O43808 307 aa8.01□□□□□ -1.13
CTNNA1-243ENST00000540387 ZNF17P17021 662 aa8.01□□□□□ -1.13
CTNNA1-243ENST00000540387 GATA2P23769 480 aaPredicted RBP8.01□□□□□ -1.13
CTNNA1-243ENST00000540387 ARF1P84077 181 aaKnown RBP8.01□□□□□ -1.13
CTNNA1-243ENST00000540387 SLAQ13239 276 aa8.01□□□□□ -1.13
CTNNA1-243ENST00000540387 KISS1Q15726 138 aa8.01□□□□□ -1.13
CTNNA1-243ENST00000540387 KIAA1644Q3SXP7 199 aa8.01□□□□□ -1.13
CTNNA1-243ENST00000540387 CRIP3Q6Q6R5 217 aa8.01□□□□□ -1.13
CTNNA1-243ENST00000540387 OR10V1Q8NGI7 309 aa8.01□□□□□ -1.13
CTNNA1-243ENST00000540387 DERL1Q9BUN8 251 aa8.01□□□□□ -1.13
CTNNA1-243ENST00000540387 NPVFQ9HCQ7 196 aa8.01□□□□□ -1.13
CTNNA1-243ENST00000540387 PTRH2Q9Y3E5 179 aaKnown RBP8.01□□□□□ -1.13
CTNNA1-243ENST00000540387 DKK1O94907 266 aa8.01□□□□□ -1.13
CTNNA1-243ENST00000540387 SLC35E2P0CK97 266 aa8.01□□□□□ -1.13
CTNNA1-243ENST00000540387 NTF3P20783 257 aa8.01□□□□□ -1.13
CTNNA1-243ENST00000540387 SRD5A2P31213 254 aa8.01□□□□□ -1.13
CTNNA1-243ENST00000540387 CKS1BP61024 79 aa8.01□□□□□ -1.13
CTNNA1-243ENST00000540387 RHOBP62745 196 aa8.01□□□□□ -1.13
CTNNA1-243ENST00000540387 GNB1P62873 340 aa8.01□□□□□ -1.13
CTNNA1-243ENST00000540387 OR10J3Q5JRS4 329 aa8.01□□□□□ -1.13
CTNNA1-243ENST00000540387 DCAF12Q5T6F0 453 aa8.01□□□□□ -1.13
CTNNA1-243ENST00000540387 OR8I2Q8N0Y5 310 aa8.01□□□□□ -1.13
CTNNA1-243ENST00000540387 SLC25A40Q8TBP6 338 aa8.01□□□□□ -1.13
CTNNA1-243ENST00000540387 SIGMAR1Q99720 223 aa8.01□□□□□ -1.13
CTNNA1-243ENST00000540387 CHRDL1Q9BU40 450 aa8.01□□□□□ -1.13
CTNNA1-243ENST00000540387 COL27A1Q8IZC6 1860 aaPredicted RBP8.01□□□□□ -1.13
CTNNA1-243ENST00000540387 BLACEA4D250 179 aa8□□□□□ -1.13
CTNNA1-243ENST00000540387 C11orf94C9JXX5 98 aa8□□□□□ -1.13
CTNNA1-243ENST00000540387 HRKO00198 91 aa8□□□□□ -1.13
CTNNA1-243ENST00000540387 PLPP3O14495 311 aa8□□□□□ -1.13
CTNNA1-243ENST00000540387 NAPSAO96009 420 aa8□□□□□ -1.13
CTNNA1-243ENST00000540387 HERV-K104P61576 105 aa8□□□□□ -1.13
CTNNA1-243ENST00000540387 Q56UQ5 140 aa8□□□□□ -1.13
CTNNA1-243ENST00000540387 FAM69BQ5VUD6 431 aa8□□□□□ -1.13
CTNNA1-243ENST00000540387 ZNF324BQ6AW86 544 aaPredicted RBP8□□□□□ -1.13
CTNNA1-243ENST00000540387 C12orf54Q6X4T0 127 aa8□□□□□ -1.13
CTNNA1-243ENST00000540387 VSTM2LQ96N03 204 aa8□□□□□ -1.13
CTNNA1-243ENST00000540387 CPAMD8Q8IZJ3 1885 aa8□□□□□ -1.13
CTNNA1-243ENST00000540387 CELSR3Q9NYQ7 3312 aa8□□□□□ -1.13
CTNNA1-243ENST00000540387 TRAV9-1A0A075B6T8 112 aa8□□□□□ -1.13
CTNNA1-243ENST00000540387 CTXND1A0A1B0GTU2 59 aa8□□□□□ -1.13
CTNNA1-243ENST00000540387 CRYAAP02489 173 aa8□□□□□ -1.13
CTNNA1-243ENST00000540387 UCP1P25874 307 aa8□□□□□ -1.13
CTNNA1-243ENST00000540387 THBS3P49746 956 aa8□□□□□ -1.13
CTNNA1-243ENST00000540387 IGLV3-21P80748 117 aaPredicted RBP8□□□□□ -1.13
CTNNA1-243ENST00000540387 SGCBQ16585 318 aa8□□□□□ -1.13
CTNNA1-243ENST00000540387 PET117Q6UWS5 81 aa8□□□□□ -1.13
CTNNA1-243ENST00000540387 TBC1D26Q86UD7 250 aa8□□□□□ -1.13
CTNNA1-243ENST00000540387 BCORP1Q8N888 145 aa8□□□□□ -1.13
CTNNA1-243ENST00000540387 OR10G8Q8NGN5 311 aa8□□□□□ -1.13
CTNNA1-243ENST00000540387 TSKUQ8WUA8 353 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms