RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 PPP1R27Q86WC6 154 aa10.5□□□□□ -0.73
CCDC130-202ENST00000540216 ZBTB34Q8NCN2 500 aa10.5□□□□□ -0.73
CCDC130-202ENST00000540216 OR5H2Q8NGV7 314 aa10.5□□□□□ -0.73
CCDC130-202ENST00000540216 EHFQ9NZC4 300 aa10.5□□□□□ -0.73
CCDC130-202ENST00000540216 CCDC59Q9P031 241 aaKnown RBP10.5□□□□□ -0.73
CCDC130-202ENST00000540216 NOTCH1P46531 2555 aa10.5□□□□□ -0.73
CCDC130-202ENST00000540216 NUDT19A8MXV4 375 aa10.49□□□□□ -0.73
CCDC130-202ENST00000540216 FCN1O00602 326 aa10.49□□□□□ -0.73
CCDC130-202ENST00000540216 CRYZL1O95825 349 aa10.49□□□□□ -0.73
CCDC130-202ENST00000540216 CA2P00918 260 aa10.49□□□□□ -0.73
CCDC130-202ENST00000540216 FCER2P06734 321 aa10.49□□□□□ -0.73
CCDC130-202ENST00000540216 RCVRNP35243 200 aa10.49□□□□□ -0.73
CCDC130-202ENST00000540216 KIR2DS2P43631 304 aa10.49□□□□□ -0.73
CCDC130-202ENST00000540216 CDX1P47902 265 aaPredicted RBP10.49□□□□□ -0.73
CCDC130-202ENST00000540216 UBE2KP61086 200 aa10.49□□□□□ -0.73
CCDC130-202ENST00000540216 HERV-K104P61576 105 aa10.49□□□□□ -0.73
CCDC130-202ENST00000540216 EIF4EBP1Q13541 118 aaPredicted RBP10.49□□□□□ -0.73
CCDC130-202ENST00000540216 DYRK1AQ13627 763 aa10.49□□□□□ -0.73
CCDC130-202ENST00000540216 TMEM65Q6PI78 240 aa10.49□□□□□ -0.73
CCDC130-202ENST00000540216 DHRS11Q6UWP2 260 aa10.49□□□□□ -0.73
CCDC130-202ENST00000540216 SNX29P2Q8IUI4 249 aa10.49□□□□□ -0.73
CCDC130-202ENST00000540216 ZNF695Q8IW36 515 aa10.49□□□□□ -0.73
CCDC130-202ENST00000540216 TEX45Q8NA69 505 aa10.49□□□□□ -0.73
CCDC130-202ENST00000540216 MINDY2Q8NBR6 621 aa10.49□□□□□ -0.73
CCDC130-202ENST00000540216 KLHL30-AS1Q8NEE0 82 aa10.49□□□□□ -0.73
CCDC130-202ENST00000540216 OR4S2Q8NH73 311 aa10.49□□□□□ -0.73
CCDC130-202ENST00000540216 ABHD5Q8WTS1 349 aa10.49□□□□□ -0.73
CCDC130-202ENST00000540216 SECTM1Q8WVN6 248 aa10.49□□□□□ -0.73
CCDC130-202ENST00000540216 ARPC1AQ92747 370 aa10.49□□□□□ -0.73
CCDC130-202ENST00000540216 FOXA2Q9Y261 457 aaPredicted RBP10.49□□□□□ -0.73
CCDC130-202ENST00000540216 G3V318 75 aa10.48□□□□□ -0.73
CCDC130-202ENST00000540216 CREBL2O60519 120 aaPredicted RBP10.48□□□□□ -0.73
CCDC130-202ENST00000540216 FCGR3BO75015 233 aa10.48□□□□□ -0.73
CCDC130-202ENST00000540216 IGLV1-40P01703 118 aa10.48□□□□□ -0.73
CCDC130-202ENST00000540216 RPLP1P05386 114 aaKnown RBP10.48□□□□□ -0.73
CCDC130-202ENST00000540216 CRYGBP07316 175 aa10.48□□□□□ -0.73
CCDC130-202ENST00000540216 ECSCRQ19T08 205 aa10.48□□□□□ -0.73
CCDC130-202ENST00000540216 AKIRIN2Q53H80 203 aa10.48□□□□□ -0.73
CCDC130-202ENST00000540216 C19orf54Q5BKX5 351 aa10.48□□□□□ -0.73
CCDC130-202ENST00000540216 PYHIN1Q6K0P9 492 aa10.48□□□□□ -0.73
CCDC130-202ENST00000540216 WFDC9Q8NEX5 89 aa10.48□□□□□ -0.73
CCDC130-202ENST00000540216 DYNC2LI1Q8TCX1 351 aa10.48□□□□□ -0.73
CCDC130-202ENST00000540216 MYOZ3Q8TDC0 251 aa10.48□□□□□ -0.73
CCDC130-202ENST00000540216 TCTEX1D2Q8WW35 142 aa10.48□□□□□ -0.73
CCDC130-202ENST00000540216 CLCC1Q96S66 551 aa10.48□□□□□ -0.73
CCDC130-202ENST00000540216 SLC5A7Q9GZV3 580 aa10.48□□□□□ -0.73
CCDC130-202ENST00000540216 TPSG1Q9NRR2 321 aa10.48□□□□□ -0.73
CCDC130-202ENST00000540216 TAS2R8Q9NYW2 309 aa10.48□□□□□ -0.73
CCDC130-202ENST00000540216 EXTL2Q9UBQ6 330 aa10.48□□□□□ -0.73
CCDC130-202ENST00000540216 FBXO7Q9Y3I1 522 aa10.48□□□□□ -0.73
CCDC130-202ENST00000540216 NUBP2Q9Y5Y2 271 aa10.48□□□□□ -0.73
CCDC130-202ENST00000540216 WSB1Q9Y6I7 421 aa10.48□□□□□ -0.73
CCDC130-202ENST00000540216 MEGF8Q7Z7M0 2845 aa10.48□□□□□ -0.73
CCDC130-202ENST00000540216 PLXNB1O43157 2135 aa10.48□□□□□ -0.73
CCDC130-202ENST00000540216 SRRM4A7MD48 611 aaKnown RBP10.47□□□□□ -0.73
CCDC130-202ENST00000540216 RGS5O15539 181 aa10.47□□□□□ -0.73
CCDC130-202ENST00000540216 RBFOX2O43251 390 aaKnown RBP eCLIP10.47□□□□□ -0.73
CCDC130-202ENST00000540216 PMP2P02689 132 aa10.47□□□□□ -0.73
CCDC130-202ENST00000540216 EGR2P11161 476 aaPredicted RBP10.47□□□□□ -0.73
CCDC130-202ENST00000540216 CD33P20138 364 aa10.47□□□□□ -0.73
CCDC130-202ENST00000540216 HRH1P35367 487 aa10.47□□□□□ -0.73
CCDC130-202ENST00000540216 RFX2P48378 723 aa10.47□□□□□ -0.73
CCDC130-202ENST00000540216 FXYD4P59646 89 aa10.47□□□□□ -0.73
CCDC130-202ENST00000540216 CATR1Q13166 79 aa10.47□□□□□ -0.73
CCDC130-202ENST00000540216 FXYD3Q14802 87 aa10.47□□□□□ -0.73
CCDC130-202ENST00000540216 ACTBL2Q562R1 376 aa10.47□□□□□ -0.73
CCDC130-202ENST00000540216 TMEM17Q86X19 198 aa10.47□□□□□ -0.73
CCDC130-202ENST00000540216 MFSD4AQ8N468 514 aa10.47□□□□□ -0.73
CCDC130-202ENST00000540216 OR5M8Q8NGP6 311 aa10.47□□□□□ -0.73
CCDC130-202ENST00000540216 C4orf3Q8WVX3 66 aa10.47□□□□□ -0.73
CCDC130-202ENST00000540216 MOB3AQ96BX8 217 aa10.47□□□□□ -0.73
CCDC130-202ENST00000540216 ISOC1Q96CN7 298 aa10.47□□□□□ -0.73
CCDC130-202ENST00000540216 TMEM68Q96MH6 324 aa10.47□□□□□ -0.73
CCDC130-202ENST00000540216 DCUN1D5Q9BTE7 237 aa10.47□□□□□ -0.73
CCDC130-202ENST00000540216 CCL28Q9NRJ3 127 aa10.47□□□□□ -0.73
CCDC130-202ENST00000540216 RABL2AQ9UBK7 228 aaPredicted RBP10.47□□□□□ -0.73
CCDC130-202ENST00000540216 RABL2BQ9UNT1 228 aa10.47□□□□□ -0.73
CCDC130-202ENST00000540216 NOTCH3Q9UM47 2321 aa10.46□□□□□ -0.73
CCDC130-202ENST00000540216 A0A1W2PN81 502 aa10.46□□□□□ -0.73
CCDC130-202ENST00000540216 H3BMQ9 156 aa10.46□□□□□ -0.73
CCDC130-202ENST00000540216 CNIH1O95406 144 aa10.46□□□□□ -0.73
CCDC130-202ENST00000540216 DUS4LO95620 317 aaKnown RBP10.46□□□□□ -0.73
CCDC130-202ENST00000540216 TBPP20226 339 aa10.46□□□□□ -0.73
CCDC130-202ENST00000540216 HLA-DMAP28067 261 aa10.46□□□□□ -0.73
CCDC130-202ENST00000540216 CD40LGP29965 261 aa10.46□□□□□ -0.73
CCDC130-202ENST00000540216 CHRNA7P36544 502 aa10.46□□□□□ -0.73
CCDC130-202ENST00000540216 MYCNOSP40205 109 aa10.46□□□□□ -0.73
CCDC130-202ENST00000540216 RPL30P62888 115 aaKnown RBP10.46□□□□□ -0.73
CCDC130-202ENST00000540216 SAMD5Q5TGI4 173 aa10.46□□□□□ -0.73
CCDC130-202ENST00000540216 UNQ5815/PRO19632Q6UWF5 114 aa10.46□□□□□ -0.73
CCDC130-202ENST00000540216 ETV3LQ6ZN32 361 aa10.46□□□□□ -0.73
CCDC130-202ENST00000540216 C8orf86Q6ZUL3 223 aa10.46□□□□□ -0.73
CCDC130-202ENST00000540216 LYSMD2Q8IV50 215 aa10.46□□□□□ -0.73
CCDC130-202ENST00000540216 OR6F1Q8NGZ6 308 aa10.46□□□□□ -0.73
CCDC130-202ENST00000540216 VSTM2AQ8TAG5 236 aa10.46□□□□□ -0.73
CCDC130-202ENST00000540216 CD300LFQ8TDQ1 290 aa10.46□□□□□ -0.73
CCDC130-202ENST00000540216 RCC1LQ96I51 464 aaKnown RBP10.46□□□□□ -0.73
CCDC130-202ENST00000540216 UBE2E2Q96LR5 201 aa10.46□□□□□ -0.73
CCDC130-202ENST00000540216 AIFM2Q9BRQ8 373 aa10.46□□□□□ -0.73
CCDC130-202ENST00000540216 ZNF2Q9BSG1 426 aaPredicted RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms