RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 RNF144BQ7Z419 303 aa7.41□□□□□ -1.22
DDB1-217ENST00000540166 NIT1Q86X76 327 aa7.41□□□□□ -1.22
DDB1-217ENST00000540166 STPG4Q8N801 248 aa7.41□□□□□ -1.22
DDB1-217ENST00000540166 OR4D5Q8NGN0 318 aa7.41□□□□□ -1.22
DDB1-217ENST00000540166 MSI2Q96DH6 328 aaKnown RBP7.41□□□□□ -1.22
DDB1-217ENST00000540166 PTPRBP23467 1997 aa7.41□□□□□ -1.22
DDB1-217ENST00000540166 CTXND1A0A1B0GTU2 59 aa7.41□□□□□ -1.22
DDB1-217ENST00000540166 M0R1X1 148 aa7.41□□□□□ -1.22
DDB1-217ENST00000540166 SYNGR2O43760 224 aa7.41□□□□□ -1.22
DDB1-217ENST00000540166 ADMP35318 185 aa7.41□□□□□ -1.22
DDB1-217ENST00000540166 IGFL3Q6UXB1 125 aa7.41□□□□□ -1.22
DDB1-217ENST00000540166 GAPTQ8N292 157 aa7.41□□□□□ -1.22
DDB1-217ENST00000540166 OSR2Q8N2R0 312 aa7.41□□□□□ -1.22
DDB1-217ENST00000540166 LRTM2Q8N967 370 aa7.41□□□□□ -1.22
DDB1-217ENST00000540166 TRIB1Q96RU8 372 aa7.41□□□□□ -1.22
DDB1-217ENST00000540166 CACNG5Q9UF02 275 aa7.41□□□□□ -1.22
DDB1-217ENST00000540166 COX11Q9Y6N1 276 aa7.41□□□□□ -1.22
DDB1-217ENST00000540166 MUC3AQ02505 3323 aa7.4□□□□□ -1.22
DDB1-217ENST00000540166 A0A1W2PQD3 144 aa7.4□□□□□ -1.22
DDB1-217ENST00000540166 DPRXA6NFQ7 191 aa7.4□□□□□ -1.22
DDB1-217ENST00000540166 VENTXO95231 258 aa7.4□□□□□ -1.22
DDB1-217ENST00000540166 PDLIM4P50479 330 aa7.4□□□□□ -1.22
DDB1-217ENST00000540166 FABP6P51161 128 aa7.4□□□□□ -1.22
DDB1-217ENST00000540166 GPHA2Q96T91 129 aa7.4□□□□□ -1.22
DDB1-217ENST00000540166 TSPAN2O60636 221 aa7.4□□□□□ -1.22
DDB1-217ENST00000540166 DHRS3O75911 302 aa7.4□□□□□ -1.22
DDB1-217ENST00000540166 CLDN14O95500 239 aa7.4□□□□□ -1.22
DDB1-217ENST00000540166 C3AR1Q16581 482 aa7.4□□□□□ -1.22
DDB1-217ENST00000540166 TDRG1Q3Y452 100 aa7.4□□□□□ -1.22
DDB1-217ENST00000540166 GJC3Q8NFK1 279 aa7.4□□□□□ -1.22
DDB1-217ENST00000540166 PIGCQ92535 297 aa7.4□□□□□ -1.22
DDB1-217ENST00000540166 SLC7A10Q9NS82 523 aa7.4□□□□□ -1.22
DDB1-217ENST00000540166 TBL2Q9Y4P3 447 aaKnown RBP7.4□□□□□ -1.22
DDB1-217ENST00000540166 LOC102725191A0A1B0GVB3 256 aa7.4□□□□□ -1.23
DDB1-217ENST00000540166 A0A1W2PRS3 328 aa7.4□□□□□ -1.23
DDB1-217ENST00000540166 NPIPB7O75200 414 aa7.4□□□□□ -1.23
DDB1-217ENST00000540166 CCNOP22674 350 aa7.4□□□□□ -1.23
DDB1-217ENST00000540166 LMO1P25800 156 aa7.4□□□□□ -1.23
DDB1-217ENST00000540166 PRSS12P56730 875 aa7.4□□□□□ -1.23
DDB1-217ENST00000540166 PDLIM3Q53GG5 364 aaPredicted RBP7.4□□□□□ -1.23
DDB1-217ENST00000540166 PLCXD3Q63HM9 321 aa7.4□□□□□ -1.23
DDB1-217ENST00000540166 SPACA9Q96E40 222 aaPredicted RBP7.4□□□□□ -1.23
DDB1-217ENST00000540166 KCNK17Q96T54 332 aa7.4□□□□□ -1.23
DDB1-217ENST00000540166 KIR2DS1A0A191URI9 304 aa7.39□□□□□ -1.23
DDB1-217ENST00000540166 NDUFB4O95168 129 aa7.39□□□□□ -1.23
DDB1-217ENST00000540166 EGR1P18146 543 aa7.39□□□□□ -1.23
DDB1-217ENST00000540166 KIR2DS4P43632 304 aa7.39□□□□□ -1.23
DDB1-217ENST00000540166 KIR2DS1Q14954 304 aa7.39□□□□□ -1.23
DDB1-217ENST00000540166 Q56UQ5 140 aa7.39□□□□□ -1.23
DDB1-217ENST00000540166 SELENOHQ8IZQ5 122 aaKnown RBP7.39□□□□□ -1.23
DDB1-217ENST00000540166 OR10P1Q8NGE3 313 aa7.39□□□□□ -1.23
DDB1-217ENST00000540166 OR10V1Q8NGI7 309 aa7.39□□□□□ -1.23
DDB1-217ENST00000540166 MBD3L1Q8WWY6 194 aa7.39□□□□□ -1.23
DDB1-217ENST00000540166 ALKBH3Q96Q83 286 aaPredicted RBP7.39□□□□□ -1.23
DDB1-217ENST00000540166 PSMG3Q9BT73 122 aaPredicted RBP7.39□□□□□ -1.23
DDB1-217ENST00000540166 HES7Q9BYE0 225 aa7.39□□□□□ -1.23
DDB1-217ENST00000540166 VSIRQ9H7M9 311 aa7.39□□□□□ -1.23
DDB1-217ENST00000540166 PLSCR2Q9NRY7 297 aa7.39□□□□□ -1.23
DDB1-217ENST00000540166 SLC45A2Q9UMX9 530 aa7.39□□□□□ -1.23
DDB1-217ENST00000540166 VPS13AQ96RL7 3174 aa7.39□□□□□ -1.23
DDB1-217ENST00000540166 CDKN1AP38936 164 aa7.39□□□□□ -1.23
DDB1-217ENST00000540166 CDC34P49427 236 aaPredicted RBP7.39□□□□□ -1.23
DDB1-217ENST00000540166 THBS3P49746 956 aa7.39□□□□□ -1.23
DDB1-217ENST00000540166 RIPPLY3P57055 190 aa7.39□□□□□ -1.23
DDB1-217ENST00000540166 GTF2H5Q6ZYL4 71 aa7.39□□□□□ -1.23
DDB1-217ENST00000540166 FAM89BQ8N5H3 189 aa7.39□□□□□ -1.23
DDB1-217ENST00000540166 ZNF331Q9NQX6 463 aaPredicted RBP7.39□□□□□ -1.23
DDB1-217ENST00000540166 ANAPC10Q9UM13 185 aa7.39□□□□□ -1.23
DDB1-217ENST00000540166 M0R135 149 aa7.39□□□□□ -1.23
DDB1-217ENST00000540166 PDE6DO43924 150 aa7.39□□□□□ -1.23
DDB1-217ENST00000540166 LILRA1O75019 489 aa7.39□□□□□ -1.23
DDB1-217ENST00000540166 MT-CO2P00403 227 aa7.39□□□□□ -1.23
DDB1-217ENST00000540166 PMCHL1Q16048 86 aa7.39□□□□□ -1.23
DDB1-217ENST00000540166 HIST3H3Q16695 136 aa7.39□□□□□ -1.23
DDB1-217ENST00000540166 OCIAD2Q56VL3 154 aa7.39□□□□□ -1.23
DDB1-217ENST00000540166 TEX43Q6ZNM6 134 aa7.39□□□□□ -1.23
DDB1-217ENST00000540166 Q6ZWC4 215 aa7.39□□□□□ -1.23
DDB1-217ENST00000540166 C1orf174Q8IYL3 243 aa7.39□□□□□ -1.23
DDB1-217ENST00000540166 LYG1Q8N1E2 194 aa7.39□□□□□ -1.23
DDB1-217ENST00000540166 ZNF799Q96GE5 643 aa7.39□□□□□ -1.23
DDB1-217ENST00000540166 OR4C12Q96R67 309 aa7.39□□□□□ -1.23
DDB1-217ENST00000540166 ULBP2Q9BZM5 246 aa7.39□□□□□ -1.23
DDB1-217ENST00000540166 GCM1Q9NP62 436 aa7.39□□□□□ -1.23
DDB1-217ENST00000540166 TNRC6BQ9UPQ9 1833 aaKnown RBP7.38□□□□□ -1.23
DDB1-217ENST00000540166 TRAV30A0A087WSZ9 112 aa7.38□□□□□ -1.23
DDB1-217ENST00000540166 PDCD6O75340 191 aa7.38□□□□□ -1.23
DDB1-217ENST00000540166 CTXN2P0C2S0 81 aa7.38□□□□□ -1.23
DDB1-217ENST00000540166 ZNF17P17021 662 aa7.38□□□□□ -1.23
DDB1-217ENST00000540166 S100A7AQ86SG5 101 aa7.38□□□□□ -1.23
DDB1-217ENST00000540166 YRDCQ86U90 279 aaKnown RBP7.38□□□□□ -1.23
DDB1-217ENST00000540166 TAF15Q92804 592 aaKnown RBP eCLIP7.38□□□□□ -1.23
DDB1-217ENST00000540166 SPSB1Q96BD6 273 aa7.38□□□□□ -1.23
DDB1-217ENST00000540166 RASL10BQ96S79 203 aa7.38□□□□□ -1.23
DDB1-217ENST00000540166 PYGO2Q9BRQ0 406 aa7.38□□□□□ -1.23
DDB1-217ENST00000540166 CST9LQ9H4G1 147 aa7.38□□□□□ -1.23
DDB1-217ENST00000540166 NRN1Q9NPD7 142 aa7.38□□□□□ -1.23
DDB1-217ENST00000540166 CLN8Q9UBY8 286 aa7.38□□□□□ -1.23
DDB1-217ENST00000540166 CDC42EP3Q9UKI2 254 aa7.38□□□□□ -1.23
DDB1-217ENST00000540166 NAV3Q8IVL0 2385 aa7.38□□□□□ -1.23
DDB1-217ENST00000540166 IGLV3-12A0A075B6K2 115 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms