RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 C1QL4Q86Z23 238 aa14.31□□□□□ -0.12
SNRPA1-203ENST00000540017 DYNC2LI1Q8TCX1 351 aa14.31□□□□□ -0.12
SNRPA1-203ENST00000540017 SECTM1Q8WVN6 248 aa14.31□□□□□ -0.12
SNRPA1-203ENST00000540017 GIMAP1Q8WWP7 306 aa14.31□□□□□ -0.12
SNRPA1-203ENST00000540017 FAM103A1Q9BTL3 118 aaKnown RBP14.31□□□□□ -0.12
SNRPA1-203ENST00000540017 ZFP57Q9NU63 452 aa14.31□□□□□ -0.12
SNRPA1-203ENST00000540017 EHFQ9NZC4 300 aa14.31□□□□□ -0.12
SNRPA1-203ENST00000540017 NUBP2Q9Y5Y2 271 aa14.31□□□□□ -0.12
SNRPA1-203ENST00000540017 TRAV41A0A0B4J266 112 aa14.3□□□□□ -0.12
SNRPA1-203ENST00000540017 CTDSP2O14595 271 aa14.3□□□□□ -0.12
SNRPA1-203ENST00000540017 ARPC1BO15143 372 aaKnown RBP14.3□□□□□ -0.12
SNRPA1-203ENST00000540017 SHOXO15266 292 aa14.3□□□□□ -0.12
SNRPA1-203ENST00000540017 ELANEP08246 267 aa14.3□□□□□ -0.12
SNRPA1-203ENST00000540017 RRASP10301 218 aa14.3□□□□□ -0.12
SNRPA1-203ENST00000540017 PF4V1P10720 104 aa14.3□□□□□ -0.12
SNRPA1-203ENST00000540017 PSMB8P28062 276 aa14.3□□□□□ -0.12
SNRPA1-203ENST00000540017 FXYD4P59646 89 aa14.3□□□□□ -0.12
SNRPA1-203ENST00000540017 OR2B11Q5JQS5 317 aa14.3□□□□□ -0.12
SNRPA1-203ENST00000540017 ZNF562Q6V9R5 426 aa14.3□□□□□ -0.12
SNRPA1-203ENST00000540017 KCTD9Q7L273 389 aa14.3□□□□□ -0.12
SNRPA1-203ENST00000540017 OVCH2Q7RTZ1 564 aa14.3□□□□□ -0.12
SNRPA1-203ENST00000540017 MINDY2Q8NBR6 621 aa14.3□□□□□ -0.12
SNRPA1-203ENST00000540017 BCL7BQ9BQE9 202 aa14.3□□□□□ -0.12
SNRPA1-203ENST00000540017 KLK15Q9H2R5 256 aa14.3□□□□□ -0.12
SNRPA1-203ENST00000540017 TAS2R8Q9NYW2 309 aa14.3□□□□□ -0.12
SNRPA1-203ENST00000540017 A3GALT2U3KPV4 340 aa14.3□□□□□ -0.12
SNRPA1-203ENST00000540017 G3V4G9 280 aa14.29□□□□□ -0.12
SNRPA1-203ENST00000540017 H3BMQ9 156 aa14.29□□□□□ -0.12
SNRPA1-203ENST00000540017 SOX15O60248 233 aa14.29□□□□□ -0.12
SNRPA1-203ENST00000540017 FCGR3BO75015 233 aa14.29□□□□□ -0.12
SNRPA1-203ENST00000540017 IGLV1-40P01703 118 aa14.29□□□□□ -0.12
SNRPA1-203ENST00000540017 HLA-DMAP28067 261 aa14.29□□□□□ -0.12
SNRPA1-203ENST00000540017 DYRK1AQ13627 763 aa14.29□□□□□ -0.12
SNRPA1-203ENST00000540017 KIAA0141Q14154 515 aaPredicted RBP14.29□□□□□ -0.12
SNRPA1-203ENST00000540017 ECSCRQ19T08 205 aa14.29□□□□□ -0.12
SNRPA1-203ENST00000540017 CXorf66Q5JRM2 361 aaPredicted RBP14.29□□□□□ -0.12
SNRPA1-203ENST00000540017 DHRS11Q6UWP2 260 aa14.29□□□□□ -0.12
SNRPA1-203ENST00000540017 C8orf86Q6ZUL3 223 aa14.29□□□□□ -0.12
SNRPA1-203ENST00000540017 PPP1R27Q86WC6 154 aa14.29□□□□□ -0.12
SNRPA1-203ENST00000540017 MFSD4AQ8N468 514 aa14.29□□□□□ -0.12
SNRPA1-203ENST00000540017 KLHL30-AS1Q8NEE0 82 aa14.29□□□□□ -0.12
SNRPA1-203ENST00000540017 ISOC1Q96CN7 298 aa14.29□□□□□ -0.12
SNRPA1-203ENST00000540017 SLC5A7Q9GZV3 580 aa14.29□□□□□ -0.12
SNRPA1-203ENST00000540017 SCPEP1Q9HB40 452 aa14.29□□□□□ -0.12
SNRPA1-203ENST00000540017 EXTL2Q9UBQ6 330 aa14.29□□□□□ -0.12
SNRPA1-203ENST00000540017 ADAM30Q9UKF2 790 aa14.29□□□□□ -0.12
SNRPA1-203ENST00000540017 CEPT1Q9Y6K0 416 aa14.29□□□□□ -0.12
SNRPA1-203ENST00000540017 TNFSF12O43508 249 aa14.28□□□□□ -0.12
SNRPA1-203ENST00000540017 HRH1P35367 487 aa14.28□□□□□ -0.12
SNRPA1-203ENST00000540017 CBX3Q13185 183 aa14.28□□□□□ -0.12
SNRPA1-203ENST00000540017 RNASE12Q5GAN4 147 aaKnown RBP14.28□□□□□ -0.12
SNRPA1-203ENST00000540017 ZNF818PQ6ZRF7 136 aa14.28□□□□□ -0.12
SNRPA1-203ENST00000540017 LAX1Q8IWV1 398 aa14.28□□□□□ -0.12
SNRPA1-203ENST00000540017 OR5H2Q8NGV7 314 aa14.28□□□□□ -0.12
SNRPA1-203ENST00000540017 MYOZ3Q8TDC0 251 aa14.28□□□□□ -0.12
SNRPA1-203ENST00000540017 TCTEX1D2Q8WW35 142 aa14.28□□□□□ -0.12
SNRPA1-203ENST00000540017 ABHD1Q96SE0 405 aa14.28□□□□□ -0.12
SNRPA1-203ENST00000540017 HSD17B10Q99714 261 aaKnown RBP14.28□□□□□ -0.12
SNRPA1-203ENST00000540017 SCOCQ9UIL1 159 aa14.28□□□□□ -0.12
SNRPA1-203ENST00000540017 PRELID3BQ9Y3B1 194 aa14.28□□□□□ -0.12
SNRPA1-203ENST00000540017 NOTCH1P46531 2555 aa14.27□□□□□ -0.13
SNRPA1-203ENST00000540017 NUDT19A8MXV4 375 aa14.27□□□□□ -0.13
SNRPA1-203ENST00000540017 PF4P02776 101 aa14.27□□□□□ -0.13
SNRPA1-203ENST00000540017 TAS2R46P59540 309 aa14.27□□□□□ -0.13
SNRPA1-203ENST00000540017 UBE2KP61086 200 aa14.27□□□□□ -0.13
SNRPA1-203ENST00000540017 DEFA6Q01524 100 aa14.27□□□□□ -0.13
SNRPA1-203ENST00000540017 FXYD3Q14802 87 aa14.27□□□□□ -0.13
SNRPA1-203ENST00000540017 MSMO1Q15800 293 aa14.27□□□□□ -0.13
SNRPA1-203ENST00000540017 SAMD5Q5TGI4 173 aa14.27□□□□□ -0.13
SNRPA1-203ENST00000540017 ZNF66Q6ZN08 573 aa14.27□□□□□ -0.13
SNRPA1-203ENST00000540017 IDO2Q6ZQW0 420 aa14.27□□□□□ -0.13
SNRPA1-203ENST00000540017 TMEM17Q86X19 198 aa14.27□□□□□ -0.13
SNRPA1-203ENST00000540017 ZNF695Q8IW36 515 aa14.27□□□□□ -0.13
SNRPA1-203ENST00000540017 LFNGQ8NES3 379 aa14.27□□□□□ -0.13
SNRPA1-203ENST00000540017 WFDC9Q8NEX5 89 aa14.27□□□□□ -0.13
SNRPA1-203ENST00000540017 OSR1Q8TAX0 266 aaPredicted RBP14.27□□□□□ -0.13
SNRPA1-203ENST00000540017 ABHD5Q8WTS1 349 aa14.27□□□□□ -0.13
SNRPA1-203ENST00000540017 CASTOR1Q8WTX7 329 aa14.27□□□□□ -0.13
SNRPA1-203ENST00000540017 DUX3Q96PT4 197 aa14.27□□□□□ -0.13
SNRPA1-203ENST00000540017 ZNF2Q9BSG1 426 aaPredicted RBP14.27□□□□□ -0.13
SNRPA1-203ENST00000540017 CCDC59Q9P031 241 aaKnown RBP14.27□□□□□ -0.13
SNRPA1-203ENST00000540017 A0A1W2PN81 502 aa14.26□□□□□ -0.13
SNRPA1-203ENST00000540017 SULT1C2O00338 296 aa14.26□□□□□ -0.13
SNRPA1-203ENST00000540017 RGS5O15539 181 aa14.26□□□□□ -0.13
SNRPA1-203ENST00000540017 GNRHRP30968 328 aa14.26□□□□□ -0.13
SNRPA1-203ENST00000540017 CHRNA7P36544 502 aa14.26□□□□□ -0.13
SNRPA1-203ENST00000540017 CDX1P47902 265 aaPredicted RBP14.26□□□□□ -0.13
SNRPA1-203ENST00000540017 GNB1P62873 340 aa14.26□□□□□ -0.13
SNRPA1-203ENST00000540017 DEFB136Q30KP8 78 aa14.26□□□□□ -0.13
SNRPA1-203ENST00000540017 OXLD1Q5BKU9 147 aa14.26□□□□□ -0.13
SNRPA1-203ENST00000540017 TEX45Q8NA69 505 aa14.26□□□□□ -0.13
SNRPA1-203ENST00000540017 OR52I2Q8NH67 350 aa14.26□□□□□ -0.13
SNRPA1-203ENST00000540017 GRPEL2Q8TAA5 225 aa14.26□□□□□ -0.13
SNRPA1-203ENST00000540017 ARPC1AQ92747 370 aa14.26□□□□□ -0.13
SNRPA1-203ENST00000540017 MOB3AQ96BX8 217 aa14.26□□□□□ -0.13
SNRPA1-203ENST00000540017 DCUN1D5Q9BTE7 237 aa14.26□□□□□ -0.13
SNRPA1-203ENST00000540017 KLK11Q9UBX7 282 aa14.26□□□□□ -0.13
SNRPA1-203ENST00000540017 SAA1P0DJI8 122 aaPredicted RBP14.25□□□□□ -0.13
SNRPA1-203ENST00000540017 RCVRNP35243 200 aa14.25□□□□□ -0.13
SNRPA1-203ENST00000540017 HERV-K104P61576 105 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms