RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 WNT5BQ9H1J7 359 aa8.51□□□□□ -1.05
TRAF1-202ENST00000540010 OOEPA6NGQ2 149 aa8.5□□□□□ -1.05
TRAF1-202ENST00000540010 PRRG2O14669 202 aa8.5□□□□□ -1.05
TRAF1-202ENST00000540010 KLK10O43240 276 aa8.5□□□□□ -1.05
TRAF1-202ENST00000540010 CCKARP32238 428 aa8.5□□□□□ -1.05
TRAF1-202ENST00000540010 TNFSF10P50591 281 aa8.5□□□□□ -1.05
TRAF1-202ENST00000540010 RNF144BQ7Z419 303 aa8.5□□□□□ -1.05
TRAF1-202ENST00000540010 BARX1Q9HBU1 254 aaPredicted RBP8.5□□□□□ -1.05
TRAF1-202ENST00000540010 PPP1R14DQ9NXH3 145 aa8.5□□□□□ -1.05
TRAF1-202ENST00000540010 IGHV3OR15-7A0A075B7D8 119 aa8.5□□□□□ -1.05
TRAF1-202ENST00000540010 A0A1B0GV90 55 aa8.5□□□□□ -1.05
TRAF1-202ENST00000540010 HELTA6NFD8 242 aa8.5□□□□□ -1.05
TRAF1-202ENST00000540010 H0Y980 276 aa8.5□□□□□ -1.05
TRAF1-202ENST00000540010 RBP4P02753 201 aa8.5□□□□□ -1.05
TRAF1-202ENST00000540010 CD1BP29016 333 aa8.5□□□□□ -1.05
TRAF1-202ENST00000540010 CSN1S1P47710 185 aa8.5□□□□□ -1.05
TRAF1-202ENST00000540010 FGFBP3Q8TAT2 258 aa8.5□□□□□ -1.05
TRAF1-202ENST00000540010 TMEM230Q96A57 120 aa8.5□□□□□ -1.05
TRAF1-202ENST00000540010 GNB4Q9HAV0 340 aa8.5□□□□□ -1.05
TRAF1-202ENST00000540010 IGKV1D-8A0A087WSZ0 117 aa8.5□□□□□ -1.05
TRAF1-202ENST00000540010 IGKV1-9A0A0C4DH69 117 aa8.5□□□□□ -1.05
TRAF1-202ENST00000540010 TMPRSS2O15393 492 aa8.5□□□□□ -1.05
TRAF1-202ENST00000540010 CCL1P22362 96 aa8.5□□□□□ -1.05
TRAF1-202ENST00000540010 ANOS1P23352 680 aa8.5□□□□□ -1.05
TRAF1-202ENST00000540010 TCF15Q12870 199 aa8.5□□□□□ -1.05
TRAF1-202ENST00000540010 TCTEX1D1Q8N7M0 179 aa8.5□□□□□ -1.05
TRAF1-202ENST00000540010 OR1L6Q8NGR2 347 aa8.5□□□□□ -1.05
TRAF1-202ENST00000540010 ZNF596Q8TC21 504 aa8.5□□□□□ -1.05
TRAF1-202ENST00000540010 RND1Q92730 232 aa8.5□□□□□ -1.05
TRAF1-202ENST00000540010 DLL3Q9NYJ7 618 aa8.5□□□□□ -1.05
TRAF1-202ENST00000540010 DMDP11532 3685 aa8.5□□□□□ -1.05
TRAF1-202ENST00000540010 BMPR1BO00238 502 aa8.5□□□□□ -1.05
TRAF1-202ENST00000540010 ADH4P08319 380 aa8.5□□□□□ -1.05
TRAF1-202ENST00000540010 CSRP1P21291 193 aaKnown RBP8.5□□□□□ -1.05
TRAF1-202ENST00000540010 CFPP27918 469 aa8.5□□□□□ -1.05
TRAF1-202ENST00000540010 RTN4RL2Q86UN3 420 aa8.5□□□□□ -1.05
TRAF1-202ENST00000540010 OR4S2Q8NH73 311 aa8.5□□□□□ -1.05
TRAF1-202ENST00000540010 OR1L1Q8NH94 360 aa8.5□□□□□ -1.05
TRAF1-202ENST00000540010 SMIM8Q96KF7 97 aa8.5□□□□□ -1.05
TRAF1-202ENST00000540010 REG4Q9BYZ8 158 aa8.5□□□□□ -1.05
TRAF1-202ENST00000540010 ASCL3Q9NQ33 180 aa8.5□□□□□ -1.05
TRAF1-202ENST00000540010 METTL1Q9UBP6 276 aaKnown RBP8.5□□□□□ -1.05
TRAF1-202ENST00000540010 LOC102724200A0A096LPH7 203 aaPredicted RBP8.49□□□□□ -1.05
TRAF1-202ENST00000540010 PQLC2LA1A4F0 135 aa8.49□□□□□ -1.05
TRAF1-202ENST00000540010 OR2H2O95918 312 aa8.49□□□□□ -1.05
TRAF1-202ENST00000540010 MOGAT3Q86VF5 341 aa8.49□□□□□ -1.05
TRAF1-202ENST00000540010 PRSS33Q8NF86 280 aa8.49□□□□□ -1.05
TRAF1-202ENST00000540010 TMEM56Q96MV1 263 aa8.49□□□□□ -1.05
TRAF1-202ENST00000540010 HSPB9Q9BQS6 159 aa8.49□□□□□ -1.05
TRAF1-202ENST00000540010 TECRQ9NZ01 308 aaKnown RBP8.49□□□□□ -1.05
TRAF1-202ENST00000540010 IGKV3D-15A0A087WSY6 115 aa8.49□□□□□ -1.05
TRAF1-202ENST00000540010 PROB1E7EW31 1015 aa8.49□□□□□ -1.05
TRAF1-202ENST00000540010 ZG16O60844 167 aa8.49□□□□□ -1.05
TRAF1-202ENST00000540010 CEACAM1P13688 526 aa8.49□□□□□ -1.05
TRAF1-202ENST00000540010 NPY1RP25929 384 aa8.49□□□□□ -1.05
TRAF1-202ENST00000540010 KIAA1644Q3SXP7 199 aa8.49□□□□□ -1.05
TRAF1-202ENST00000540010 FBXW9Q5XUX1 488 aa8.49□□□□□ -1.05
TRAF1-202ENST00000540010 OR2D3Q8NGH3 330 aa8.49□□□□□ -1.05
TRAF1-202ENST00000540010 GRIFINA4D1Z8 144 aa8.49□□□□□ -1.05
TRAF1-202ENST00000540010 HBZP02008 142 aa8.49□□□□□ -1.05
TRAF1-202ENST00000540010 GZMHP20718 246 aa8.49□□□□□ -1.05
TRAF1-202ENST00000540010 WNT5AP41221 380 aa8.49□□□□□ -1.05
TRAF1-202ENST00000540010 ETFRF1Q6IPR1 90 aa8.49□□□□□ -1.05
TRAF1-202ENST00000540010 FAM216AQ8WUB2 273 aa8.49□□□□□ -1.05
TRAF1-202ENST00000540010 LINC00470Q9BZP3 86 aa8.49□□□□□ -1.05
TRAF1-202ENST00000540010 CXXC4Q9H2H0 198 aa8.49□□□□□ -1.05
TRAF1-202ENST00000540010 NCOA6Q14686 2063 aaPredicted RBP8.48□□□□□ -1.05
TRAF1-202ENST00000540010 LDLRAD4O15165 306 aa8.48□□□□□ -1.05
TRAF1-202ENST00000540010 USF1P22415 310 aaPredicted RBP8.48□□□□□ -1.05
TRAF1-202ENST00000540010 REG1BP48304 166 aa8.48□□□□□ -1.05
TRAF1-202ENST00000540010 FOXG1P55316 489 aaPredicted RBP8.48□□□□□ -1.05
TRAF1-202ENST00000540010 RBPJQ06330 500 aa8.48□□□□□ -1.05
TRAF1-202ENST00000540010 RSPO1Q2MKA7 263 aaPredicted RBP8.48□□□□□ -1.05
TRAF1-202ENST00000540010 CYB5R2Q6BCY4 276 aa8.48□□□□□ -1.05
TRAF1-202ENST00000540010 OR1P1Q8NH06 330 aa8.48□□□□□ -1.05
TRAF1-202ENST00000540010 BCL2L2Q92843 193 aaPredicted RBP8.48□□□□□ -1.05
TRAF1-202ENST00000540010 CHRDL1Q9BU40 450 aa8.48□□□□□ -1.05
TRAF1-202ENST00000540010 WDR61Q9GZS3 305 aaKnown RBP8.48□□□□□ -1.05
TRAF1-202ENST00000540010 TIMM9Q9Y5J7 89 aa8.48□□□□□ -1.05
TRAF1-202ENST00000540010 M0R2Z0 102 aa8.48□□□□□ -1.05
TRAF1-202ENST00000540010 CRYGSP22914 178 aa8.48□□□□□ -1.05
TRAF1-202ENST00000540010 OR10J1P30954 320 aa8.48□□□□□ -1.05
TRAF1-202ENST00000540010 OTX1P32242 354 aaPredicted RBP8.48□□□□□ -1.05
TRAF1-202ENST00000540010 TNFAIP6P98066 277 aaPredicted RBP8.48□□□□□ -1.05
TRAF1-202ENST00000540010 RTP5Q14D33 572 aa8.48□□□□□ -1.05
TRAF1-202ENST00000540010 RNFT1Q5M7Z0 435 aa8.48□□□□□ -1.05
TRAF1-202ENST00000540010 MIC13Q5XKP0 118 aa8.48□□□□□ -1.05
TRAF1-202ENST00000540010 PARLQ9H300 379 aa8.48□□□□□ -1.05
TRAF1-202ENST00000540010 CBLN4Q9NTU7 201 aa8.48□□□□□ -1.05
TRAF1-202ENST00000540010 IGHV3-21A0A0B4J1V1 117 aa8.48□□□□□ -1.05
TRAF1-202ENST00000540010 ATXN7O15265 892 aaPredicted RBP8.48□□□□□ -1.05
TRAF1-202ENST00000540010 HTR1DP28221 377 aa8.48□□□□□ -1.05
TRAF1-202ENST00000540010 GLIPR1P48060 266 aa8.48□□□□□ -1.05
TRAF1-202ENST00000540010 KLF3P57682 345 aaPredicted RBP8.48□□□□□ -1.05
TRAF1-202ENST00000540010 FA2HQ7L5A8 372 aa8.48□□□□□ -1.05
TRAF1-202ENST00000540010 PRSS3P2Q8NHM4 247 aa8.48□□□□□ -1.05
TRAF1-202ENST00000540010 FAM122AQ96E09 287 aa8.48□□□□□ -1.05
TRAF1-202ENST00000540010 OR6C3Q9NZP0 311 aa8.48□□□□□ -1.05
TRAF1-202ENST00000540010 SPRR3Q9UBC9 169 aa8.48□□□□□ -1.05
TRAF1-202ENST00000540010 IL36RNQ9UBH0 155 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms