RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 POLR2GP62487 172 aaKnown RBP eCLIP1.79□□□□□ -2.12
SNHG1-210ENST00000539303 HOXC5Q00444 222 aa1.79□□□□□ -2.12
SNHG1-210ENST00000539303 RUNX1Q01196 453 aa1.79□□□□□ -2.12
SNHG1-210ENST00000539303 GNA12Q03113 381 aa1.79□□□□□ -2.12
SNHG1-210ENST00000539303 OR8G1Q15617 311 aa1.79□□□□□ -2.12
SNHG1-210ENST00000539303 KCNJ8Q15842 424 aa1.79□□□□□ -2.12
SNHG1-210ENST00000539303 LGALSLQ3ZCW2 172 aaPredicted RBP1.79□□□□□ -2.12
SNHG1-210ENST00000539303 C16orf47Q6ZP98 133 aaPredicted RBP1.79□□□□□ -2.12
SNHG1-210ENST00000539303 SCXQ7RTU7 201 aa1.79□□□□□ -2.12
SNHG1-210ENST00000539303 LYG2Q86SG7 212 aa1.79□□□□□ -2.12
SNHG1-210ENST00000539303 UMODL1-AS1Q8N2C9 162 aa1.79□□□□□ -2.12
SNHG1-210ENST00000539303 ANKRD29Q8N6D5 301 aa1.79□□□□□ -2.12
SNHG1-210ENST00000539303 OR2D3Q8NGH3 330 aa1.79□□□□□ -2.12
SNHG1-210ENST00000539303 OR51A2Q8NGJ7 313 aa1.79□□□□□ -2.12
SNHG1-210ENST00000539303 OR4K13Q8NH42 304 aa1.79□□□□□ -2.12
SNHG1-210ENST00000539303 OR4X1Q8NH49 305 aa1.79□□□□□ -2.12
SNHG1-210ENST00000539303 KLF14Q8TD94 323 aaPredicted RBP1.79□□□□□ -2.12
SNHG1-210ENST00000539303 ZNF721Q8TF20 911 aa1.79□□□□□ -2.12
SNHG1-210ENST00000539303 RAB2BQ8WUD1 216 aa1.79□□□□□ -2.12
SNHG1-210ENST00000539303 CPNE2Q96FN4 548 aaPredicted RBP1.79□□□□□ -2.12
SNHG1-210ENST00000539303 CNBD2Q96M20 576 aa1.79□□□□□ -2.12
SNHG1-210ENST00000539303 CCL13Q99616 98 aa1.79□□□□□ -2.12
SNHG1-210ENST00000539303 HOPXQ9BPY8 73 aaPredicted RBP1.79□□□□□ -2.12
SNHG1-210ENST00000539303 LCE3DQ9BYE3 92 aa1.79□□□□□ -2.12
SNHG1-210ENST00000539303 GPR84Q9NQS5 396 aa1.79□□□□□ -2.12
SNHG1-210ENST00000539303 CYTL1Q9NRR1 136 aa1.79□□□□□ -2.12
SNHG1-210ENST00000539303 C14orf105Q9NVL8 296 aa1.79□□□□□ -2.12
SNHG1-210ENST00000539303 ARMC1Q9NVT9 282 aa1.79□□□□□ -2.12
SNHG1-210ENST00000539303 MRPL27Q9P0M9 148 aaKnown RBP1.79□□□□□ -2.12
SNHG1-210ENST00000539303 OR5V1Q9UGF6 321 aa1.79□□□□□ -2.12
SNHG1-210ENST00000539303 ANGPT4Q9Y264 503 aa1.79□□□□□ -2.12
SNHG1-210ENST00000539303 COQ4Q9Y3A0 265 aa1.79□□□□□ -2.12
SNHG1-210ENST00000539303 WRNQ14191 1432 aaPredicted RBP eCLIP1.79□□□□□ -2.12
SNHG1-210ENST00000539303 NCOA1Q15788 1441 aa1.79□□□□□ -2.12
SNHG1-210ENST00000539303 PLA2R1Q13018 1463 aa1.79□□□□□ -2.12
SNHG1-210ENST00000539303 NLRC5Q86WI3 1866 aa1.79□□□□□ -2.12
SNHG1-210ENST00000539303 OTOFQ9HC10 1997 aa1.78□□□□□ -2.12
SNHG1-210ENST00000539303 DOCK5Q9H7D0 1870 aa1.78□□□□□ -2.12
SNHG1-210ENST00000539303 CEP170Q5SW79 1584 aa1.78□□□□□ -2.12
SNHG1-210ENST00000539303 EIF3AQ14152 1382 aaKnown RBP1.78□□□□□ -2.12
SNHG1-210ENST00000539303 TRAV40A0A0B4J280 105 aa1.78□□□□□ -2.12
SNHG1-210ENST00000539303 FAM236DA0A1B0GTK5 79 aa1.78□□□□□ -2.12
SNHG1-210ENST00000539303 hADV38S2A0JD32 116 aa1.78□□□□□ -2.12
SNHG1-210ENST00000539303 A8MUU9 505 aa1.78□□□□□ -2.12
SNHG1-210ENST00000539303 H0YJX3 145 aa1.78□□□□□ -2.12
SNHG1-210ENST00000539303 H3BQ85 93 aa1.78□□□□□ -2.12
SNHG1-210ENST00000539303 UBE2L6O14933 153 aa1.78□□□□□ -2.12
SNHG1-210ENST00000539303 LECT2O14960 151 aa1.78□□□□□ -2.12
SNHG1-210ENST00000539303 HLA-DRB1P01911 266 aa1.78□□□□□ -2.12
SNHG1-210ENST00000539303 FAM236CP0DP71 79 aa1.78□□□□□ -2.12
SNHG1-210ENST00000539303 ATP6V0CP27449 155 aa1.78□□□□□ -2.12
SNHG1-210ENST00000539303 KLF3P57682 345 aaPredicted RBP1.78□□□□□ -2.12
SNHG1-210ENST00000539303 SNRPD2P62316 118 aaKnown RBP1.78□□□□□ -2.12
SNHG1-210ENST00000539303 RBX1P62877 108 aa1.78□□□□□ -2.12
SNHG1-210ENST00000539303 TNFAIP6P98066 277 aaPredicted RBP1.78□□□□□ -2.12
SNHG1-210ENST00000539303 POU6F1Q14863 301 aa1.78□□□□□ -2.12
SNHG1-210ENST00000539303 LY6EQ16553 131 aa1.78□□□□□ -2.12
SNHG1-210ENST00000539303 IAH1Q2TAA2 248 aaPredicted RBP1.78□□□□□ -2.12
SNHG1-210ENST00000539303 ARHGAP11BQ3KRB8 267 aa1.78□□□□□ -2.12
SNHG1-210ENST00000539303 TMEM69Q5SWH9 247 aa1.78□□□□□ -2.12
SNHG1-210ENST00000539303 TRIQKQ629K1 86 aa1.78□□□□□ -2.12
SNHG1-210ENST00000539303 LYZL2Q7Z4W2 148 aa1.78□□□□□ -2.12
SNHG1-210ENST00000539303 AKAP14Q86UN6 197 aa1.78□□□□□ -2.12
SNHG1-210ENST00000539303 ZFAND2AQ8N6M9 145 aa1.78□□□□□ -2.12
SNHG1-210ENST00000539303 PACRGLQ8N7B6 248 aa1.78□□□□□ -2.12
SNHG1-210ENST00000539303 ZNF676Q8N7Q3 588 aa1.78□□□□□ -2.12
SNHG1-210ENST00000539303 DAND5Q8N907 189 aa1.78□□□□□ -2.12
SNHG1-210ENST00000539303 ZNF680Q8NEM1 530 aa1.78□□□□□ -2.12
SNHG1-210ENST00000539303 BPIFB6Q8NFQ5 453 aa1.78□□□□□ -2.12
SNHG1-210ENST00000539303 OR5P3Q8WZ94 311 aa1.78□□□□□ -2.12
SNHG1-210ENST00000539303 SPIN2AQ99865 258 aa1.78□□□□□ -2.12
SNHG1-210ENST00000539303 NIPSNAP1Q9BPW8 284 aa1.78□□□□□ -2.12
SNHG1-210ENST00000539303 SPIN2BQ9BPZ2 258 aa1.78□□□□□ -2.12
SNHG1-210ENST00000539303 C1QTNF6Q9BXI9 259 aa1.78□□□□□ -2.12
SNHG1-210ENST00000539303 NKX6-2Q9C056 277 aaPredicted RBP1.78□□□□□ -2.12
SNHG1-210ENST00000539303 RNASE7Q9H1E1 156 aaKnown RBP1.78□□□□□ -2.12
SNHG1-210ENST00000539303 TRABDQ9H4I3 376 aa1.78□□□□□ -2.12
SNHG1-210ENST00000539303 IDI2-AS1Q9NZ38 188 aa1.78□□□□□ -2.12
SNHG1-210ENST00000539303 HHLA2Q9UM44 414 aa1.78□□□□□ -2.12
SNHG1-210ENST00000539303 LINC00588Q9Y4M8 146 aa1.78□□□□□ -2.12
SNHG1-210ENST00000539303 COL4A4P53420 1690 aaPredicted RBP1.77□□□□□ -2.13
SNHG1-210ENST00000539303 CAMSAP1Q5T5Y3 1602 aa1.77□□□□□ -2.13
SNHG1-210ENST00000539303 DCCP43146 1447 aa1.77□□□□□ -2.13
SNHG1-210ENST00000539303 CRB1P82279 1406 aa1.77□□□□□ -2.13
SNHG1-210ENST00000539303 MTUS2Q5JR59 1369 aa1.77□□□□□ -2.13
SNHG1-210ENST00000539303 IGHV3OR16-8A0A075B7F1 116 aa1.77□□□□□ -2.13
SNHG1-210ENST00000539303 FAM159BA6NKW6 160 aa1.77□□□□□ -2.13
SNHG1-210ENST00000539303 C15orf65H3BRN8 121 aa1.77□□□□□ -2.13
SNHG1-210ENST00000539303 FAAHO00519 579 aa1.77□□□□□ -2.13
SNHG1-210ENST00000539303 RTL8CO15255 209 aa1.77□□□□□ -2.13
SNHG1-210ENST00000539303 KLRC4O43908 158 aa1.77□□□□□ -2.13
SNHG1-210ENST00000539303 CRYZL1O95825 349 aa1.77□□□□□ -2.13
SNHG1-210ENST00000539303 IGHV3-53P01767 116 aa1.77□□□□□ -2.13
SNHG1-210ENST00000539303 IGHMP01871 453 aa1.77□□□□□ -2.13
SNHG1-210ENST00000539303 CRYGDP07320 174 aa1.77□□□□□ -2.13
SNHG1-210ENST00000539303 KCNE1P15382 129 aa1.77□□□□□ -2.13
SNHG1-210ENST00000539303 CAV1Q03135 178 aa1.77□□□□□ -2.13
SNHG1-210ENST00000539303 GRK1Q15835 563 aa1.77□□□□□ -2.13
SNHG1-210ENST00000539303 PYCR3Q53H96 274 aa1.77□□□□□ -2.13
SNHG1-210ENST00000539303 TEX36Q5VZQ5 186 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms