RNA–Protein interactions for RNA: ENST00000539232.1

LMO3-220, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-220ENST00000539232 RNF141Q8WVD5 230 aa5.79□□□□□ -1.48
LMO3-220ENST00000539232 FCAMRQ8WWV6 532 aa5.79□□□□□ -1.48
LMO3-220ENST00000539232 RAB24Q969Q5 203 aa5.79□□□□□ -1.48
LMO3-220ENST00000539232 WWC2-AS2Q96NR7 200 aa5.79□□□□□ -1.48
LMO3-220ENST00000539232 CITED1Q99966 193 aa5.79□□□□□ -1.48
LMO3-220ENST00000539232 CMSS1Q9BQ75 279 aaKnown RBP5.79□□□□□ -1.48
LMO3-220ENST00000539232 NICN1Q9BSH3 213 aa5.79□□□□□ -1.48
LMO3-220ENST00000539232 CLEC7AQ9BXN2 247 aa5.79□□□□□ -1.48
LMO3-220ENST00000539232 SELENOIQ9C0D9 397 aa5.79□□□□□ -1.48
LMO3-220ENST00000539232 LINC00574Q9H8X3 128 aa5.79□□□□□ -1.48
LMO3-220ENST00000539232 BEX1Q9HBH7 125 aa5.79□□□□□ -1.48
LMO3-220ENST00000539232 SERTAD4Q9NUC0 356 aa5.79□□□□□ -1.48
LMO3-220ENST00000539232 GFOD1Q9NXC2 390 aa5.79□□□□□ -1.48
LMO3-220ENST00000539232 PSG11Q9UQ72 335 aa5.79□□□□□ -1.48
LMO3-220ENST00000539232 TENM2Q9NT68 2774 aa5.78□□□□□ -1.48
LMO3-220ENST00000539232 FXYD6-FXYD2A0A087WZ82 144 aa5.78□□□□□ -1.48
LMO3-220ENST00000539232 A0A1W2PPH5 198 aa5.78□□□□□ -1.48
LMO3-220ENST00000539232 C12orf77C9JDV5 145 aa5.78□□□□□ -1.48
LMO3-220ENST00000539232 BUB1B-PAK6H3BSN5 160 aa5.78□□□□□ -1.48
LMO3-220ENST00000539232 ARPC1BO15143 372 aaKnown RBP5.78□□□□□ -1.48
LMO3-220ENST00000539232 CSF1P09603 554 aa5.78□□□□□ -1.48
LMO3-220ENST00000539232 CD3GP09693 182 aa5.78□□□□□ -1.48
LMO3-220ENST00000539232 SNRPBP14678 240 aaKnown RBP5.78□□□□□ -1.48
LMO3-220ENST00000539232 HLA-GP17693 338 aa5.78□□□□□ -1.48
LMO3-220ENST00000539232 HTR2CP28335 458 aa5.78□□□□□ -1.48
LMO3-220ENST00000539232 CD34P28906 385 aa5.78□□□□□ -1.48
LMO3-220ENST00000539232 REG1BP48304 166 aa5.78□□□□□ -1.48
LMO3-220ENST00000539232 GNG10P50151 68 aa5.78□□□□□ -1.48
LMO3-220ENST00000539232 ZNF134P52741 427 aa5.78□□□□□ -1.48
LMO3-220ENST00000539232 CLDN12P56749 244 aa5.78□□□□□ -1.48
LMO3-220ENST00000539232 OR10A3P58181 314 aa5.78□□□□□ -1.48
LMO3-220ENST00000539232 LOXL3P58215 753 aa5.78□□□□□ -1.48
LMO3-220ENST00000539232 PKIAP61925 76 aa5.78□□□□□ -1.48
LMO3-220ENST00000539232 DGCR2P98153 550 aa5.78□□□□□ -1.48
LMO3-220ENST00000539232 RBM39Q14498 530 aaKnown RBP5.78□□□□□ -1.48
LMO3-220ENST00000539232 GNMTQ14749 295 aa5.78□□□□□ -1.48
LMO3-220ENST00000539232 HLA-DRB5Q30154 266 aa5.78□□□□□ -1.48
LMO3-220ENST00000539232 C1orf100Q5SVJ3 147 aa5.78□□□□□ -1.48
LMO3-220ENST00000539232 TPTE2P1Q5T6R2 138 aa5.78□□□□□ -1.48
LMO3-220ENST00000539232 GLT8D1Q68CQ7 371 aa5.78□□□□□ -1.48
LMO3-220ENST00000539232 AWAT2Q6E213 333 aa5.78□□□□□ -1.48
LMO3-220ENST00000539232 RAB12Q6IQ22 244 aa5.78□□□□□ -1.48
LMO3-220ENST00000539232 EIF5AL1Q6IS14 154 aaKnown RBP5.78□□□□□ -1.48
LMO3-220ENST00000539232 C10orf99Q6UWK7 81 aa5.78□□□□□ -1.48
LMO3-220ENST00000539232 ZNF497Q6ZNH5 498 aa5.78□□□□□ -1.48
LMO3-220ENST00000539232 ACOT7LQ6ZUV0 252 aa5.78□□□□□ -1.48
LMO3-220ENST00000539232 SLC16A13Q7RTY0 426 aa5.78□□□□□ -1.48
LMO3-220ENST00000539232 ZNF546Q86UE3 836 aa5.78□□□□□ -1.48
LMO3-220ENST00000539232 NR2C2APQ86WQ0 139 aa5.78□□□□□ -1.48
LMO3-220ENST00000539232 COMMD1Q8N668 190 aa5.78□□□□□ -1.48
LMO3-220ENST00000539232 OR4K15Q8NH41 348 aa5.78□□□□□ -1.48
LMO3-220ENST00000539232 OR5R1Q8NH85 324 aa5.78□□□□□ -1.48
LMO3-220ENST00000539232 RAB3CQ96E17 227 aa5.78□□□□□ -1.48
LMO3-220ENST00000539232 Q96M66 194 aa5.78□□□□□ -1.48
LMO3-220ENST00000539232 NEU1Q99519 415 aa5.78□□□□□ -1.48
LMO3-220ENST00000539232 S100A13Q99584 98 aa5.78□□□□□ -1.48
LMO3-220ENST00000539232 SULT4A1Q9BR01 284 aa5.78□□□□□ -1.48
LMO3-220ENST00000539232 HDHD3Q9BSH5 251 aaPredicted RBP5.78□□□□□ -1.48
LMO3-220ENST00000539232 TOLLIPQ9H0E2 274 aa5.78□□□□□ -1.48
LMO3-220ENST00000539232 PARP12Q9H0J9 701 aaKnown RBP5.78□□□□□ -1.48
LMO3-220ENST00000539232 FXYD6Q9H0Q3 95 aa5.78□□□□□ -1.48
LMO3-220ENST00000539232 RHOFQ9HBH0 211 aa5.78□□□□□ -1.48
LMO3-220ENST00000539232 IDI2-AS1Q9NZ38 188 aa5.78□□□□□ -1.48
LMO3-220ENST00000539232 RCC2Q9P258 522 aaKnown RBP5.78□□□□□ -1.48
LMO3-220ENST00000539232 ZNF107Q9UII5 783 aaPredicted RBP5.78□□□□□ -1.48
LMO3-220ENST00000539232 TCF19Q9Y242 345 aa5.78□□□□□ -1.48
LMO3-220ENST00000539232 AK6Q9Y3D8 172 aaKnown RBP5.78□□□□□ -1.48
LMO3-220ENST00000539232 TBL2Q9Y4P3 447 aaKnown RBP5.78□□□□□ -1.48
LMO3-220ENST00000539232 ETV7Q9Y603 341 aa5.78□□□□□ -1.48
LMO3-220ENST00000539232 A0A087X0M5 115 aa5.77□□□□□ -1.49
LMO3-220ENST00000539232 IGHV3-72A0A0B4J1Y9 119 aa5.77□□□□□ -1.49
LMO3-220ENST00000539232 A0A1B0GX30 115 aa5.77□□□□□ -1.49
LMO3-220ENST00000539232 hCG_1809904A0A1W2PP81 198 aa5.77□□□□□ -1.49
LMO3-220ENST00000539232 A0A1W2PPE2 198 aa5.77□□□□□ -1.49
LMO3-220ENST00000539232 A0A1W2PPI3 338 aa5.77□□□□□ -1.49
LMO3-220ENST00000539232 A0A1W2PR64 198 aa5.77□□□□□ -1.49
LMO3-220ENST00000539232 A0A1W2PRV1 198 aa5.77□□□□□ -1.49
LMO3-220ENST00000539232 SMIM30A4D0T7 59 aa5.77□□□□□ -1.49
LMO3-220ENST00000539232 BTBD17A6NE02 478 aa5.77□□□□□ -1.49
LMO3-220ENST00000539232 LINC01548A6NM66 108 aa5.77□□□□□ -1.49
LMO3-220ENST00000539232 ADARB2-AS1A8MUL3 147 aa5.77□□□□□ -1.49
LMO3-220ENST00000539232 ZNF736B4DX44 427 aaPredicted RBP5.77□□□□□ -1.49
LMO3-220ENST00000539232 TSTD3H0UI37 97 aa5.77□□□□□ -1.49
LMO3-220ENST00000539232 J3QR06 171 aa5.77□□□□□ -1.49
LMO3-220ENST00000539232 GPR31O00270 319 aa5.77□□□□□ -1.49
LMO3-220ENST00000539232 MFNGO00587 321 aa5.77□□□□□ -1.49
LMO3-220ENST00000539232 TIMM23O14925 209 aa5.77□□□□□ -1.49
LMO3-220ENST00000539232 NDUFS6O75380 124 aaKnown RBP5.77□□□□□ -1.49
LMO3-220ENST00000539232 SIX6O95475 246 aa5.77□□□□□ -1.49
LMO3-220ENST00000539232 MPIG6BO95866 241 aa5.77□□□□□ -1.49
LMO3-220ENST00000539232 IFNA17P01571 189 aa5.77□□□□□ -1.49
LMO3-220ENST00000539232 CSTBP04080 98 aaKnown RBP5.77□□□□□ -1.49
LMO3-220ENST00000539232 VSIG10L2P0DP72 767 aa5.77□□□□□ -1.49
LMO3-220ENST00000539232 CD28P10747 220 aa5.77□□□□□ -1.49
LMO3-220ENST00000539232 TPT1P13693 172 aaKnown RBP5.77□□□□□ -1.49
LMO3-220ENST00000539232 GTF2F2P13984 249 aa5.77□□□□□ -1.49
LMO3-220ENST00000539232 SRMP19623 302 aa5.77□□□□□ -1.49
LMO3-220ENST00000539232 ANXA7P20073 488 aaKnown RBP5.77□□□□□ -1.49
LMO3-220ENST00000539232 HTR1DP28221 377 aa5.77□□□□□ -1.49
LMO3-220ENST00000539232 PAX5Q02548 391 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms