RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 C18orf12Q96KH6 178 aa12.52□□□□□ -0.41
VAMP1-207ENST00000539047 CHIAQ9BZP6 476 aa12.52□□□□□ -0.41
VAMP1-207ENST00000539047 WASHC3Q9Y3C0 194 aa12.52□□□□□ -0.41
VAMP1-207ENST00000539047 ABCA2Q9BZC7 2435 aa12.51□□□□□ -0.41
VAMP1-207ENST00000539047 TRAV40A0A0B4J280 105 aa12.51□□□□□ -0.41
VAMP1-207ENST00000539047 A0A1W2PRD5 423 aa12.51□□□□□ -0.41
VAMP1-207ENST00000539047 A0A1W2PRF3 423 aa12.51□□□□□ -0.41
VAMP1-207ENST00000539047 A0A1W2PRM7 423 aa12.51□□□□□ -0.41
VAMP1-207ENST00000539047 A8MV72 311 aaPredicted RBP12.51□□□□□ -0.41
VAMP1-207ENST00000539047 NPFFO15130 113 aa12.51□□□□□ -0.41
VAMP1-207ENST00000539047 ADAP1O75689 374 aa12.51□□□□□ -0.41
VAMP1-207ENST00000539047 CRYZL1O95825 349 aa12.51□□□□□ -0.41
VAMP1-207ENST00000539047 HRASP01112 189 aa12.51□□□□□ -0.41
VAMP1-207ENST00000539047 CT45A6P0DMU7 189 aa12.51□□□□□ -0.41
VAMP1-207ENST00000539047 CT45A5P0DMU8 189 aa12.51□□□□□ -0.41
VAMP1-207ENST00000539047 CT45A7P0DMV0 189 aa12.51□□□□□ -0.41
VAMP1-207ENST00000539047 CXCL3P19876 107 aa12.51□□□□□ -0.41
VAMP1-207ENST00000539047 GGNBP1Q5YKI7 109 aa12.51□□□□□ -0.41
VAMP1-207ENST00000539047 LYZL2Q7Z4W2 148 aa12.51□□□□□ -0.41
VAMP1-207ENST00000539047 MOB3BQ86TA1 216 aa12.51□□□□□ -0.41
VAMP1-207ENST00000539047 ZNF383Q8NA42 475 aa12.51□□□□□ -0.41
VAMP1-207ENST00000539047 MAPK1IP1LQ8NDC0 245 aa12.51□□□□□ -0.41
VAMP1-207ENST00000539047 DMBX1Q8NFW5 382 aa12.51□□□□□ -0.41
VAMP1-207ENST00000539047 DDB2Q92466 427 aa12.51□□□□□ -0.41
VAMP1-207ENST00000539047 LSM10Q969L4 123 aaKnown RBP12.51□□□□□ -0.41
VAMP1-207ENST00000539047 NABP2Q9BQ15 211 aa12.51□□□□□ -0.41
VAMP1-207ENST00000539047 ITGB1BP2Q9UKP3 347 aa12.51□□□□□ -0.41
VAMP1-207ENST00000539047 IGHV1-3A0A0C4DH29 117 aa12.5□□□□□ -0.41
VAMP1-207ENST00000539047 RAMP3O60896 148 aa12.5□□□□□ -0.41
VAMP1-207ENST00000539047 S1PR2O95136 353 aa12.5□□□□□ -0.41
VAMP1-207ENST00000539047 PET100P0DJ07 73 aa12.5□□□□□ -0.41
VAMP1-207ENST00000539047 NQO2P16083 231 aa12.5□□□□□ -0.41
VAMP1-207ENST00000539047 FGL1Q08830 312 aa12.5□□□□□ -0.41
VAMP1-207ENST00000539047 IAH1Q2TAA2 248 aaPredicted RBP12.5□□□□□ -0.41
VAMP1-207ENST00000539047 HCP5Q6MZN7 132 aa12.5□□□□□ -0.41
VAMP1-207ENST00000539047 H2BFWTQ7Z2G1 175 aa12.5□□□□□ -0.41
VAMP1-207ENST00000539047 TCTE3Q8IZS6 198 aa12.5□□□□□ -0.41
VAMP1-207ENST00000539047 LHFPL5Q8TAF8 219 aa12.5□□□□□ -0.41
VAMP1-207ENST00000539047 R3HDM4Q96D70 268 aa12.5□□□□□ -0.41
VAMP1-207ENST00000539047 C2orf50Q96LR7 162 aa12.5□□□□□ -0.41
VAMP1-207ENST00000539047 NEURL2Q9BR09 285 aa12.5□□□□□ -0.41
VAMP1-207ENST00000539047 RANBP3Q9H6Z4 567 aaPredicted RBP12.5□□□□□ -0.41
VAMP1-207ENST00000539047 RANGRFQ9HD47 186 aaPredicted RBP12.5□□□□□ -0.41
VAMP1-207ENST00000539047 ZFP57Q9NU63 452 aa12.5□□□□□ -0.41
VAMP1-207ENST00000539047 SETD2Q9BYW2 2564 aaPredicted RBP12.5□□□□□ -0.41
VAMP1-207ENST00000539047 F8P00451 2351 aa12.49□□□□□ -0.41
VAMP1-207ENST00000539047 IGHV1-69DA0A0B4J2H0 117 aa12.49□□□□□ -0.41
VAMP1-207ENST00000539047 H0YJW9 148 aa12.49□□□□□ -0.41
VAMP1-207ENST00000539047 SMAD7O15105 426 aaKnown RBP12.49□□□□□ -0.41
VAMP1-207ENST00000539047 SHOXO15266 292 aa12.49□□□□□ -0.41
VAMP1-207ENST00000539047 PROP1O75360 226 aa12.49□□□□□ -0.41
VAMP1-207ENST00000539047 SIX6O95475 246 aa12.49□□□□□ -0.41
VAMP1-207ENST00000539047 IGHV1-69P01742 117 aa12.49□□□□□ -0.41
VAMP1-207ENST00000539047 HNRNPCP07910 306 aaKnown RBP eCLIP12.49□□□□□ -0.41
VAMP1-207ENST00000539047 SAA4P35542 130 aa12.49□□□□□ -0.41
VAMP1-207ENST00000539047 SMCO1Q147U7 214 aa12.49□□□□□ -0.41
VAMP1-207ENST00000539047 ZNF585BQ52M93 769 aa12.49□□□□□ -0.41
VAMP1-207ENST00000539047 OR5AN1Q8NGI8 311 aa12.49□□□□□ -0.41
VAMP1-207ENST00000539047 OR4C13Q8NGP0 309 aa12.49□□□□□ -0.41
VAMP1-207ENST00000539047 OSR1Q8TAX0 266 aaPredicted RBP12.49□□□□□ -0.41
VAMP1-207ENST00000539047 FLYWCH2Q96CP2 140 aaKnown RBP12.49□□□□□ -0.41
VAMP1-207ENST00000539047 MALSU1Q96EH3 234 aa12.49□□□□□ -0.41
VAMP1-207ENST00000539047 NMES1Q9C002 83 aa12.49□□□□□ -0.41
VAMP1-207ENST00000539047 HILPDAQ9Y5L2 63 aa12.49□□□□□ -0.41
VAMP1-207ENST00000539047 MMP24Q9Y5R2 645 aa12.49□□□□□ -0.41
VAMP1-207ENST00000539047 WNK2Q9Y3S1 2297 aa12.48□□□□□ -0.41
VAMP1-207ENST00000539047 CENPVL3A0A0U1RRI6 287 aa12.48□□□□□ -0.41
VAMP1-207ENST00000539047 MARCH11A6NNE9 402 aa12.48□□□□□ -0.41
VAMP1-207ENST00000539047 LY6LH3BQJ8 138 aa12.48□□□□□ -0.41
VAMP1-207ENST00000539047 OR2A4O95047 310 aa12.48□□□□□ -0.41
VAMP1-207ENST00000539047 KRASP01116 189 aa12.48□□□□□ -0.41
VAMP1-207ENST00000539047 SLC25A6P12236 298 aa12.48□□□□□ -0.41
VAMP1-207ENST00000539047 BRS3P32247 399 aa12.48□□□□□ -0.41
VAMP1-207ENST00000539047 H2BFSP57053 126 aa12.48□□□□□ -0.41
VAMP1-207ENST00000539047 BPIFB3P59826 476 aa12.48□□□□□ -0.41
VAMP1-207ENST00000539047 C2orf68Q2NKX9 166 aa12.48□□□□□ -0.41
VAMP1-207ENST00000539047 ZFP69Q49AA0 526 aa12.48□□□□□ -0.41
VAMP1-207ENST00000539047 OR2T35Q8NGX2 323 aa12.48□□□□□ -0.41
VAMP1-207ENST00000539047 OR1S1Q8NH92 325 aa12.48□□□□□ -0.41
VAMP1-207ENST00000539047 ST6GAL2Q96JF0 529 aa12.48□□□□□ -0.41
VAMP1-207ENST00000539047 HARBI1Q96MB7 349 aa12.48□□□□□ -0.41
VAMP1-207ENST00000539047 OR2A7Q96R45 310 aa12.48□□□□□ -0.41
VAMP1-207ENST00000539047 GSKIPQ9P0R6 139 aa12.48□□□□□ -0.41
VAMP1-207ENST00000539047 CACFD1Q9UGQ2 172 aa12.48□□□□□ -0.41
VAMP1-207ENST00000539047 PRRC2AP48634 2157 aaKnown RBP12.47□□□□□ -0.41
VAMP1-207ENST00000539047 A0A1B0GU03 582 aa12.47□□□□□ -0.41
VAMP1-207ENST00000539047 RBMXL2O75526 392 aaKnown RBP12.47□□□□□ -0.41
VAMP1-207ENST00000539047 G6PCP35575 357 aa12.47□□□□□ -0.41
VAMP1-207ENST00000539047 RPS16P62249 146 aaKnown RBP12.47□□□□□ -0.41
VAMP1-207ENST00000539047 SSX2Q16385 188 aa12.47□□□□□ -0.41
VAMP1-207ENST00000539047 C1orf229Q6ZS94 237 aaPredicted RBP12.47□□□□□ -0.41
VAMP1-207ENST00000539047 LHFPL4Q7Z7J7 247 aa12.47□□□□□ -0.41
VAMP1-207ENST00000539047 ZBTB8BQ8NAP8 495 aaPredicted RBP12.47□□□□□ -0.41
VAMP1-207ENST00000539047 VSTM2AQ8TAG5 236 aa12.47□□□□□ -0.41
VAMP1-207ENST00000539047 SEC22AQ96IW7 307 aa12.47□□□□□ -0.41
VAMP1-207ENST00000539047 MS4A7Q9GZW8 240 aaPredicted RBP12.47□□□□□ -0.41
VAMP1-207ENST00000539047 FAM96BQ9Y3D0 163 aa12.47□□□□□ -0.41
VAMP1-207ENST00000539047 A0A1W2PPI3 338 aa12.46□□□□□ -0.41
VAMP1-207ENST00000539047 FAM90A9PA6NNJ1 464 aa12.46□□□□□ -0.41
VAMP1-207ENST00000539047 WRBO00258 174 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms