RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 VAMP1P23763 118 aa18.83■□□□□ 0.61
TMEM260-202ENST00000538838 KIR2DS2P43631 304 aa18.83■□□□□ 0.61
TMEM260-202ENST00000538838 TAGLNQ01995 201 aaKnown RBP18.83■□□□□ 0.61
TMEM260-202ENST00000538838 HNF4GQ14541 408 aa18.83■□□□□ 0.61
TMEM260-202ENST00000538838 LY6EQ16553 131 aa18.83■□□□□ 0.61
TMEM260-202ENST00000538838 OR4S2Q8NH73 311 aa18.83■□□□□ 0.61
TMEM260-202ENST00000538838 TNFRSF19Q9NS68 423 aa18.83■□□□□ 0.61
TMEM260-202ENST00000538838 PEX14O75381 377 aa18.82■□□□□ 0.6
TMEM260-202ENST00000538838 FAM106CPP0CH98 169 aa18.82■□□□□ 0.6
TMEM260-202ENST00000538838 RRASP10301 218 aa18.82■□□□□ 0.6
TMEM260-202ENST00000538838 DHODHQ02127 395 aa18.82■□□□□ 0.6
TMEM260-202ENST00000538838 CBX3Q13185 183 aa18.82■□□□□ 0.6
TMEM260-202ENST00000538838 SLC9A3R2Q15599 337 aa18.82■□□□□ 0.6
TMEM260-202ENST00000538838 ZNF585BQ52M93 769 aa18.82■□□□□ 0.6
TMEM260-202ENST00000538838 OR2T10Q8NGZ9 312 aa18.82■□□□□ 0.6
TMEM260-202ENST00000538838 EAF1Q96JC9 268 aaPredicted RBP18.82■□□□□ 0.6
TMEM260-202ENST00000538838 RITA1Q96K30 269 aa18.82■□□□□ 0.6
TMEM260-202ENST00000538838 MARVELD1Q9BSK0 173 aa18.82■□□□□ 0.6
TMEM260-202ENST00000538838 PRR13Q9NZ81 148 aa18.82■□□□□ 0.6
TMEM260-202ENST00000538838 TCF19Q9Y242 345 aa18.82■□□□□ 0.6
TMEM260-202ENST00000538838 CUBNO60494 3623 aa18.82■□□□□ 0.6
TMEM260-202ENST00000538838 MOSP00540 346 aa18.82■□□□□ 0.6
TMEM260-202ENST00000538838 OR4E1P0C645 316 aa18.82■□□□□ 0.6
TMEM260-202ENST00000538838 TMEM11P17152 192 aa18.82■□□□□ 0.6
TMEM260-202ENST00000538838 MECP2P51608 486 aaKnown RBP18.82■□□□□ 0.6
TMEM260-202ENST00000538838 UBE2MP61081 183 aaKnown RBP18.82■□□□□ 0.6
TMEM260-202ENST00000538838 EBI3Q14213 229 aa18.82■□□□□ 0.6
TMEM260-202ENST00000538838 C4orf46Q504U0 113 aa18.82■□□□□ 0.6
TMEM260-202ENST00000538838 RBMS3Q6XE24 437 aaKnown RBP18.82■□□□□ 0.6
TMEM260-202ENST00000538838 TMEM219Q86XT9 240 aa18.82■□□□□ 0.6
TMEM260-202ENST00000538838 THNSL2Q86YJ6 484 aa18.82■□□□□ 0.6
TMEM260-202ENST00000538838 SSMEM1Q8WWF3 244 aa18.82■□□□□ 0.6
TMEM260-202ENST00000538838 INMT-MINDY4F8WBC2 141 aa18.81■□□□□ 0.6
TMEM260-202ENST00000538838 RBFOX2O43251 390 aaKnown RBP eCLIP18.81■□□□□ 0.6
TMEM260-202ENST00000538838 S1PR2O95136 353 aa18.81■□□□□ 0.6
TMEM260-202ENST00000538838 HLA-AP01891 365 aaKnown RBP18.81■□□□□ 0.6
TMEM260-202ENST00000538838 OXA1LQ15070 435 aa18.81■□□□□ 0.6
TMEM260-202ENST00000538838 TRIM16LQ309B1 348 aa18.81■□□□□ 0.6
TMEM260-202ENST00000538838 DHRS7BQ6IAN0 325 aaPredicted RBP18.81■□□□□ 0.6
TMEM260-202ENST00000538838 TCTEX1D1Q8N7M0 179 aa18.81■□□□□ 0.6
TMEM260-202ENST00000538838 CD300LFQ8TDQ1 290 aa18.81■□□□□ 0.6
TMEM260-202ENST00000538838 FLYWCH2Q96CP2 140 aaKnown RBP18.81■□□□□ 0.6
TMEM260-202ENST00000538838 GALNT14Q96FL9 552 aa18.81■□□□□ 0.6
TMEM260-202ENST00000538838 DUX5Q96PT3 197 aa18.81■□□□□ 0.6
TMEM260-202ENST00000538838 CNTFRP26992 372 aa18.8■□□□□ 0.6
TMEM260-202ENST00000538838 TMEM177Q53S58 311 aa18.8■□□□□ 0.6
TMEM260-202ENST00000538838 Q8N6K4 173 aa18.8■□□□□ 0.6
TMEM260-202ENST00000538838 OR52B4Q8NGK2 314 aa18.8■□□□□ 0.6
TMEM260-202ENST00000538838 OR4C13Q8NGP0 309 aa18.8■□□□□ 0.6
TMEM260-202ENST00000538838 OR5R1Q8NH85 324 aa18.8■□□□□ 0.6
TMEM260-202ENST00000538838 CASTOR1Q8WTX7 329 aa18.8■□□□□ 0.6
TMEM260-202ENST00000538838 GLYATL2Q8WU03 294 aa18.8■□□□□ 0.6
TMEM260-202ENST00000538838 HARBI1Q96MB7 349 aa18.8■□□□□ 0.6
TMEM260-202ENST00000538838 SEC22CQ9BRL7 303 aa18.8■□□□□ 0.6
TMEM260-202ENST00000538838 ALX4Q9H161 411 aaPredicted RBP18.8■□□□□ 0.6
TMEM260-202ENST00000538838 KCNIP3Q9Y2W7 256 aa18.8■□□□□ 0.6
TMEM260-202ENST00000538838 C9orf170A2RU37 121 aa18.79■□□□□ 0.6
TMEM260-202ENST00000538838 A6NDX4 124 aa18.79■□□□□ 0.6
TMEM260-202ENST00000538838 BTBD17A6NE02 478 aa18.79■□□□□ 0.6
TMEM260-202ENST00000538838 DNAJC9-AS1A6NH13 148 aa18.79■□□□□ 0.6
TMEM260-202ENST00000538838 SFT2D2O95562 160 aa18.79■□□□□ 0.6
TMEM260-202ENST00000538838 IFNA2P01563 188 aa18.79■□□□□ 0.6
TMEM260-202ENST00000538838 SERPINE2P07093 398 aa18.79■□□□□ 0.6
TMEM260-202ENST00000538838 UCP1P25874 307 aa18.79■□□□□ 0.6
TMEM260-202ENST00000538838 LPAR6P43657 344 aa18.79■□□□□ 0.6
TMEM260-202ENST00000538838 RPS16P62249 146 aaKnown RBP18.79■□□□□ 0.6
TMEM260-202ENST00000538838 DHRS2Q13268 280 aa18.79■□□□□ 0.6
TMEM260-202ENST00000538838 TMEM222Q9H0R3 208 aa18.79■□□□□ 0.6
TMEM260-202ENST00000538838 ESM1Q9NQ30 184 aa18.79■□□□□ 0.6
TMEM260-202ENST00000538838 SHOXO15266 292 aa18.78■□□□□ 0.6
TMEM260-202ENST00000538838 TMEM187Q14656 261 aa18.78■□□□□ 0.6
TMEM260-202ENST00000538838 C11orf88Q6PI97 169 aa18.78■□□□□ 0.6
TMEM260-202ENST00000538838 LYG2Q86SG7 212 aa18.78■□□□□ 0.6
TMEM260-202ENST00000538838 ZNF418Q8TF45 676 aaPredicted RBP18.78■□□□□ 0.6
TMEM260-202ENST00000538838 CHPT1Q8WUD6 406 aa18.78■□□□□ 0.6
TMEM260-202ENST00000538838 FAM212BQ9NTI7 297 aaPredicted RBP18.78■□□□□ 0.6
TMEM260-202ENST00000538838 VPREB3Q9UKI3 123 aa18.78■□□□□ 0.6
TMEM260-202ENST00000538838 NIPBLQ6KC79 2804 aaeCLIP18.78■□□□□ 0.6
TMEM260-202ENST00000538838 B3GALNT1O75752 331 aa18.78■□□□□ 0.6
TMEM260-202ENST00000538838 HPRT1P00492 218 aa18.78■□□□□ 0.6
TMEM260-202ENST00000538838 IGKV1-39P01597 117 aa18.78■□□□□ 0.6
TMEM260-202ENST00000538838 IGKV1D-39P04432 117 aa18.78■□□□□ 0.6
TMEM260-202ENST00000538838 ANXA3P12429 323 aa18.78■□□□□ 0.6
TMEM260-202ENST00000538838 RAG2P55895 527 aa18.78■□□□□ 0.6
TMEM260-202ENST00000538838 LHFPL5Q8TAF8 219 aa18.78■□□□□ 0.6
TMEM260-202ENST00000538838 OSR1Q8TAX0 266 aaPredicted RBP18.78■□□□□ 0.6
TMEM260-202ENST00000538838 PLEKHA2Q9HB19 425 aa18.78■□□□□ 0.6
TMEM260-202ENST00000538838 SRRM4A7MD48 611 aaKnown RBP18.77■□□□□ 0.6
TMEM260-202ENST00000538838 F2RL1P55085 397 aa18.77■□□□□ 0.6
TMEM260-202ENST00000538838 MMDQ15546 238 aa18.77■□□□□ 0.6
TMEM260-202ENST00000538838 ANKRD55Q3KP44 614 aa18.77■□□□□ 0.6
TMEM260-202ENST00000538838 VKORC1L1Q8N0U8 176 aa18.77■□□□□ 0.6
TMEM260-202ENST00000538838 SLC25A33Q9BSK2 321 aa18.77■□□□□ 0.6
TMEM260-202ENST00000538838 PITPNC1Q9UKF7 332 aa18.77■□□□□ 0.6
TMEM260-202ENST00000538838 POMT1Q9Y6A1 747 aa18.77■□□□□ 0.6
TMEM260-202ENST00000538838 CHST1O43916 411 aa18.76■□□□□ 0.59
TMEM260-202ENST00000538838 RPA2P15927 270 aa18.76■□□□□ 0.59
TMEM260-202ENST00000538838 LIAT1Q6ZQX7 453 aa18.76■□□□□ 0.59
TMEM260-202ENST00000538838 RBM14Q96PK6 669 aaKnown RBP18.76■□□□□ 0.59
TMEM260-202ENST00000538838 CHIAQ9BZP6 476 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms