RNA–Protein interactions for RNA: ENST00000538064.1

LRRK1-211, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-211ENST00000538064 SEC14L6B5MCN3 397 aa11.59□□□□□ -0.55
LRRK1-211ENST00000538064 ELK1P19419 428 aa11.59□□□□□ -0.55
LRRK1-211ENST00000538064 RAB9AP51151 201 aa11.59□□□□□ -0.55
LRRK1-211ENST00000538064 ARPC4P59998 168 aa11.59□□□□□ -0.55
LRRK1-211ENST00000538064 GNB1P62873 340 aa11.59□□□□□ -0.55
LRRK1-211ENST00000538064 CX3CL1P78423 397 aa11.59□□□□□ -0.55
LRRK1-211ENST00000538064 ZNF616Q08AN1 781 aa11.59□□□□□ -0.55
LRRK1-211ENST00000538064 ASPHD1Q5U4P2 390 aa11.59□□□□□ -0.55
LRRK1-211ENST00000538064 CNIH2Q6PI25 160 aa11.59□□□□□ -0.55
LRRK1-211ENST00000538064 HOGA1Q86XE5 327 aa11.59□□□□□ -0.55
LRRK1-211ENST00000538064 PDPNQ86YL7 162 aa11.59□□□□□ -0.55
LRRK1-211ENST00000538064 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.59□□□□□ -0.55
LRRK1-211ENST00000538064 B9D2Q9BPU9 175 aa11.59□□□□□ -0.55
LRRK1-211ENST00000538064 IFT46Q9NQC8 304 aa11.59□□□□□ -0.55
LRRK1-211ENST00000538064 FOXA2Q9Y261 457 aaPredicted RBP11.59□□□□□ -0.55
LRRK1-211ENST00000538064 MRPS7Q9Y2R9 242 aaKnown RBP11.59□□□□□ -0.55
LRRK1-211ENST00000538064 RBM7Q9Y580 266 aaKnown RBP11.59□□□□□ -0.55
LRRK1-211ENST00000538064 IGKV1D-8A0A087WSZ0 117 aa11.58□□□□□ -0.56
LRRK1-211ENST00000538064 A0A1W2PN81 502 aa11.58□□□□□ -0.56
LRRK1-211ENST00000538064 RGS5O15539 181 aa11.58□□□□□ -0.56
LRRK1-211ENST00000538064 SOX15O60248 233 aa11.58□□□□□ -0.56
LRRK1-211ENST00000538064 PROP1O75360 226 aa11.58□□□□□ -0.56
LRRK1-211ENST00000538064 APOA2P02652 100 aa11.58□□□□□ -0.56
LRRK1-211ENST00000538064 PRSS3P35030 304 aa11.58□□□□□ -0.56
LRRK1-211ENST00000538064 CHRNA7P36544 502 aa11.58□□□□□ -0.56
LRRK1-211ENST00000538064 PSG5Q15238 335 aa11.58□□□□□ -0.56
LRRK1-211ENST00000538064 ZNF383Q8NA42 475 aa11.58□□□□□ -0.56
LRRK1-211ENST00000538064 DRAXINQ8NBI3 349 aaPredicted RBP11.58□□□□□ -0.56
LRRK1-211ENST00000538064 BEST4Q8NFU0 473 aa11.58□□□□□ -0.56
LRRK1-211ENST00000538064 OR1N2Q8NGR9 330 aa11.58□□□□□ -0.56
LRRK1-211ENST00000538064 DYNC2LI1Q8TCX1 351 aa11.58□□□□□ -0.56
LRRK1-211ENST00000538064 ABHD5Q8WTS1 349 aa11.58□□□□□ -0.56
LRRK1-211ENST00000538064 C15orf40Q8WUR7 153 aa11.58□□□□□ -0.56
LRRK1-211ENST00000538064 TSNAXQ99598 290 aaKnown RBP11.58□□□□□ -0.56
LRRK1-211ENST00000538064 METTL1Q9UBP6 276 aaKnown RBP11.58□□□□□ -0.56
LRRK1-211ENST00000538064 RSL24D1Q9UHA3 163 aaKnown RBP11.58□□□□□ -0.56
LRRK1-211ENST00000538064 RNF150Q9ULK6 438 aa11.58□□□□□ -0.56
LRRK1-211ENST00000538064 FCN1O00602 326 aa11.57□□□□□ -0.56
LRRK1-211ENST00000538064 TPPPO94811 219 aa11.57□□□□□ -0.56
LRRK1-211ENST00000538064 HLA-DQB1P01920 261 aa11.57□□□□□ -0.56
LRRK1-211ENST00000538064 IGKV1-16P04430 117 aa11.57□□□□□ -0.56
LRRK1-211ENST00000538064 OR8U9P0C7N5 309 aa11.57□□□□□ -0.56
LRRK1-211ENST00000538064 EGR2P11161 476 aaPredicted RBP11.57□□□□□ -0.56
LRRK1-211ENST00000538064 CD69Q07108 199 aa11.57□□□□□ -0.56
LRRK1-211ENST00000538064 VAX1Q5SQQ9 334 aa11.57□□□□□ -0.56
LRRK1-211ENST00000538064 PYHIN1Q6K0P9 492 aa11.57□□□□□ -0.56
LRRK1-211ENST00000538064 C11orf87Q6NUJ2 197 aa11.57□□□□□ -0.56
LRRK1-211ENST00000538064 H1FOOQ8IZA3 346 aaPredicted RBP11.57□□□□□ -0.56
LRRK1-211ENST00000538064 GVQW1Q8N7I0 195 aa11.57□□□□□ -0.56
LRRK1-211ENST00000538064 OR5B12Q96R08 314 aa11.57□□□□□ -0.56
LRRK1-211ENST00000538064 SCPEP1Q9HB40 452 aa11.57□□□□□ -0.56
LRRK1-211ENST00000538064 EXTL2Q9UBQ6 330 aa11.57□□□□□ -0.56
LRRK1-211ENST00000538064 GAB2Q9UQC2 676 aa11.57□□□□□ -0.56
LRRK1-211ENST00000538064 NUBP2Q9Y5Y2 271 aa11.57□□□□□ -0.56
LRRK1-211ENST00000538064 A3GALT2U3KPV4 340 aa11.57□□□□□ -0.56
LRRK1-211ENST00000538064 SORL1Q92673 2214 aa11.56□□□□□ -0.56
LRRK1-211ENST00000538064 ZNF701M0R085 212 aaPredicted RBP11.56□□□□□ -0.56
LRRK1-211ENST00000538064 M0R1X1 148 aa11.56□□□□□ -0.56
LRRK1-211ENST00000538064 CA2P00918 260 aa11.56□□□□□ -0.56
LRRK1-211ENST00000538064 LGALS1P09382 135 aaKnown RBP11.56□□□□□ -0.56
LRRK1-211ENST00000538064 PTHLHP12272 177 aa11.56□□□□□ -0.56
LRRK1-211ENST00000538064 TMEM267Q0VDI3 215 aaPredicted RBP11.56□□□□□ -0.56
LRRK1-211ENST00000538064 AKIRIN2Q53H80 203 aa11.56□□□□□ -0.56
LRRK1-211ENST00000538064 ZNF562Q6V9R5 426 aa11.56□□□□□ -0.56
LRRK1-211ENST00000538064 PPP1R27Q86WC6 154 aa11.56□□□□□ -0.56
LRRK1-211ENST00000538064 SNX29P2Q8IUI4 249 aa11.56□□□□□ -0.56
LRRK1-211ENST00000538064 OR2D2Q9H210 308 aa11.56□□□□□ -0.56
LRRK1-211ENST00000538064 MEIS3P1A6NDR6 274 aa11.55□□□□□ -0.56
LRRK1-211ENST00000538064 SULT1C2O00338 296 aa11.55□□□□□ -0.56
LRRK1-211ENST00000538064 INSL3P51460 131 aa11.55□□□□□ -0.56
LRRK1-211ENST00000538064 LINC00205P59089 165 aa11.55□□□□□ -0.56
LRRK1-211ENST00000538064 RPS16P62249 146 aaKnown RBP11.55□□□□□ -0.56
LRRK1-211ENST00000538064 ACTBL2Q562R1 376 aa11.55□□□□□ -0.56
LRRK1-211ENST00000538064 ARPC1AQ92747 370 aa11.55□□□□□ -0.56
LRRK1-211ENST00000538064 FLYWCH2Q96CP2 140 aaKnown RBP11.55□□□□□ -0.56
LRRK1-211ENST00000538064 PRR25Q96S07 402 aa11.55□□□□□ -0.56
LRRK1-211ENST00000538064 CLCC1Q96S66 551 aa11.55□□□□□ -0.56
LRRK1-211ENST00000538064 FAM103A1Q9BTL3 118 aaKnown RBP11.55□□□□□ -0.56
LRRK1-211ENST00000538064 C6orf62Q9GZU0 229 aaPredicted RBP11.55□□□□□ -0.56
LRRK1-211ENST00000538064 ALX4Q9H161 411 aaPredicted RBP11.55□□□□□ -0.56
LRRK1-211ENST00000538064 TPSG1Q9NRR2 321 aa11.55□□□□□ -0.56
LRRK1-211ENST00000538064 SLC35D1Q9NTN3 355 aa11.55□□□□□ -0.56
LRRK1-211ENST00000538064 SDHAF2Q9NX18 166 aa11.55□□□□□ -0.56
LRRK1-211ENST00000538064 NDUFA13Q9P0J0 144 aa11.55□□□□□ -0.56
LRRK1-211ENST00000538064 OR2W1Q9Y3N9 320 aa11.55□□□□□ -0.56
LRRK1-211ENST00000538064 CTDSP2O14595 271 aa11.54□□□□□ -0.56
LRRK1-211ENST00000538064 SLC25A17O43808 307 aa11.54□□□□□ -0.56
LRRK1-211ENST00000538064 SLC22A5O76082 557 aa11.54□□□□□ -0.56
LRRK1-211ENST00000538064 FCER2P06734 321 aa11.54□□□□□ -0.56
LRRK1-211ENST00000538064 NFYAP23511 347 aaPredicted RBP11.54□□□□□ -0.56
LRRK1-211ENST00000538064 ECI1P42126 302 aa11.54□□□□□ -0.56
LRRK1-211ENST00000538064 TAS2R46P59540 309 aa11.54□□□□□ -0.56
LRRK1-211ENST00000538064 UNQ5815/PRO19632Q6UWF5 114 aa11.54□□□□□ -0.56
LRRK1-211ENST00000538064 OR5AP2Q8NGF4 316 aa11.54□□□□□ -0.56
LRRK1-211ENST00000538064 GPX8Q8TED1 209 aa11.54□□□□□ -0.56
LRRK1-211ENST00000538064 CASTOR1Q8WTX7 329 aa11.54□□□□□ -0.56
LRRK1-211ENST00000538064 C5orf30Q96GV9 206 aa11.54□□□□□ -0.56
LRRK1-211ENST00000538064 SLIRPQ9GZT3 109 aaKnown RBP11.54□□□□□ -0.56
LRRK1-211ENST00000538064 RBM38Q9H0Z9 239 aaKnown RBP11.54□□□□□ -0.56
LRRK1-211ENST00000538064 SLA2Q9H6Q3 261 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms