RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 CLDND2Q8NHS1 167 aa12.93□□□□□ -0.34
MKS1-204ENST00000537529 CT45A3Q8NHU0 189 aa12.93□□□□□ -0.34
MKS1-204ENST00000537529 LEAP2Q969E1 77 aa12.93□□□□□ -0.34
MKS1-204ENST00000537529 TRAV38-1A0A0B4J264 116 aa12.93□□□□□ -0.34
MKS1-204ENST00000537529 hADV38S2A0JD32 116 aa12.93□□□□□ -0.34
MKS1-204ENST00000537529 PMS2P5A8MQ11 134 aa12.93□□□□□ -0.34
MKS1-204ENST00000537529 IFNA17P01571 189 aa12.93□□□□□ -0.34
MKS1-204ENST00000537529 HSPB1P04792 205 aaKnown RBP12.93□□□□□ -0.34
MKS1-204ENST00000537529 UCNP55089 124 aa12.93□□□□□ -0.34
MKS1-204ENST00000537529 SPCS3P61009 180 aa12.93□□□□□ -0.34
MKS1-204ENST00000537529 TLE1Q04724 770 aa12.93□□□□□ -0.34
MKS1-204ENST00000537529 RHEBQ15382 184 aa12.93□□□□□ -0.34
MKS1-204ENST00000537529 ZNF787Q6DD87 383 aa12.93□□□□□ -0.34
MKS1-204ENST00000537529 FAM122CQ6P4D5 195 aa12.93□□□□□ -0.34
MKS1-204ENST00000537529 TGIF2LYQ8IUE0 185 aa12.93□□□□□ -0.34
MKS1-204ENST00000537529 C1orf87Q8N0U7 546 aa12.93□□□□□ -0.34
MKS1-204ENST00000537529 MBD3L1Q8WWY6 194 aa12.93□□□□□ -0.34
MKS1-204ENST00000537529 DDB2Q92466 427 aa12.93□□□□□ -0.34
MKS1-204ENST00000537529 ADTRPQ96IZ2 230 aa12.93□□□□□ -0.34
MKS1-204ENST00000537529 SAP30LQ9HAJ7 183 aa12.93□□□□□ -0.34
MKS1-204ENST00000537529 DCAF16Q9NXF7 216 aa12.93□□□□□ -0.34
MKS1-204ENST00000537529 SAA2-SAA4A0A096LPE2 208 aa12.92□□□□□ -0.34
MKS1-204ENST00000537529 SNRNP70P08621 437 aaKnown RBP12.92□□□□□ -0.34
MKS1-204ENST00000537529 SRP19P09132 144 aaKnown RBP12.92□□□□□ -0.34
MKS1-204ENST00000537529 SAA2P0DJI9 122 aaPredicted RBP12.92□□□□□ -0.34
MKS1-204ENST00000537529 RPP30P78346 268 aaKnown RBP12.92□□□□□ -0.34
MKS1-204ENST00000537529 FLI1Q01543 452 aaPredicted RBP12.92□□□□□ -0.34
MKS1-204ENST00000537529 KHDC3LQ587J8 217 aa12.92□□□□□ -0.34
MKS1-204ENST00000537529 SPINK9Q5DT21 86 aa12.92□□□□□ -0.34
MKS1-204ENST00000537529 SSX9Q7RTT3 188 aa12.92□□□□□ -0.34
MKS1-204ENST00000537529 CENPVQ7Z7K6 275 aaPredicted RBP12.92□□□□□ -0.34
MKS1-204ENST00000537529 ZNF439Q8NDP4 499 aa12.92□□□□□ -0.34
MKS1-204ENST00000537529 OR52E5Q8NH55 327 aa12.92□□□□□ -0.34
MKS1-204ENST00000537529 WFIKKN1Q96NZ8 548 aa12.92□□□□□ -0.34
MKS1-204ENST00000537529 VSIRQ9H7M9 311 aa12.92□□□□□ -0.34
MKS1-204ENST00000537529 C7orf77A4D0Y5 90 aa12.92□□□□□ -0.34
MKS1-204ENST00000537529 NDUFB7P17568 137 aa12.92□□□□□ -0.34
MKS1-204ENST00000537529 PAX6P26367 422 aa12.92□□□□□ -0.34
MKS1-204ENST00000537529 ELLP55199 621 aaPredicted RBP12.92□□□□□ -0.34
MKS1-204ENST00000537529 GNB2P62879 340 aa12.92□□□□□ -0.34
MKS1-204ENST00000537529 MRPS11P82912 194 aaKnown RBP12.92□□□□□ -0.34
MKS1-204ENST00000537529 RCC1LQ96I51 464 aaKnown RBP12.92□□□□□ -0.34
MKS1-204ENST00000537529 AIFM2Q9BRQ8 373 aa12.92□□□□□ -0.34
MKS1-204ENST00000537529 LINC00312Q9Y6C7 94 aa12.92□□□□□ -0.34
MKS1-204ENST00000537529 LOC102723971A0A1B0GUV8 181 aa12.91□□□□□ -0.34
MKS1-204ENST00000537529 A0A1W2PPE3 182 aa12.91□□□□□ -0.34
MKS1-204ENST00000537529 TMPRSS2O15393 492 aa12.91□□□□□ -0.34
MKS1-204ENST00000537529 FGF7P21781 194 aa12.91□□□□□ -0.34
MKS1-204ENST00000537529 CASP6P55212 293 aa12.91□□□□□ -0.34
MKS1-204ENST00000537529 ZNF726P1Q15940 193 aa12.91□□□□□ -0.34
MKS1-204ENST00000537529 VWC2Q2TAL6 325 aa12.91□□□□□ -0.34
MKS1-204ENST00000537529 UTF1Q5T230 341 aa12.91□□□□□ -0.34
MKS1-204ENST00000537529 LYG1Q8N1E2 194 aa12.91□□□□□ -0.34
MKS1-204ENST00000537529 C15orf54Q8N8G6 183 aa12.91□□□□□ -0.34
MKS1-204ENST00000537529 RXFP4Q8TDU9 374 aa12.91□□□□□ -0.34
MKS1-204ENST00000537529 TMEM140Q9NV12 185 aa12.91□□□□□ -0.34
MKS1-204ENST00000537529 MLXQ9UH92 298 aa12.91□□□□□ -0.34
MKS1-204ENST00000537529 CADP27708 2225 aa12.9□□□□□ -0.34
MKS1-204ENST00000537529 TRGV8A0A0C4DH27 118 aa12.9□□□□□ -0.34
MKS1-204ENST00000537529 MEF2CQ06413 473 aaPredicted RBP12.9□□□□□ -0.34
MKS1-204ENST00000537529 PDLIM3Q53GG5 364 aaPredicted RBP12.9□□□□□ -0.34
MKS1-204ENST00000537529 SMUG1Q53HV7 270 aa12.9□□□□□ -0.34
MKS1-204ENST00000537529 LCN15Q6UWW0 184 aa12.9□□□□□ -0.34
MKS1-204ENST00000537529 ETV3LQ6ZN32 361 aa12.9□□□□□ -0.34
MKS1-204ENST00000537529 GAL3ST2Q9H3Q3 398 aa12.9□□□□□ -0.34
MKS1-204ENST00000537529 GNG13Q9P2W3 67 aa12.9□□□□□ -0.34
MKS1-204ENST00000537529 SLC25A10Q9UBX3 287 aaPredicted RBP12.9□□□□□ -0.34
MKS1-204ENST00000537529 RPUSD1Q9UJJ7 312 aaKnown RBP12.9□□□□□ -0.34
MKS1-204ENST00000537529 CFAP47Q6ZTR5 3102 aa12.9□□□□□ -0.34
MKS1-204ENST00000537529 PPIAL4EA0A075B759 164 aa12.9□□□□□ -0.34
MKS1-204ENST00000537529 C15orf62A8K5M9 175 aa12.9□□□□□ -0.34
MKS1-204ENST00000537529 PPIAL4DF5H284 164 aa12.9□□□□□ -0.34
MKS1-204ENST00000537529 MBP02144 154 aa12.9□□□□□ -0.34
MKS1-204ENST00000537529 ARG1P05089 322 aa12.9□□□□□ -0.34
MKS1-204ENST00000537529 PPIAL4FP0DN26 164 aa12.9□□□□□ -0.34
MKS1-204ENST00000537529 AKR1C3P42330 323 aa12.9□□□□□ -0.34
MKS1-204ENST00000537529 GNG10P50151 68 aa12.9□□□□□ -0.34
MKS1-204ENST00000537529 RELBQ01201 579 aa12.9□□□□□ -0.34
MKS1-204ENST00000537529 NCMAPQ5T1S8 102 aa12.9□□□□□ -0.34
MKS1-204ENST00000537529 OR10A7Q8NGE5 316 aa12.9□□□□□ -0.34
MKS1-204ENST00000537529 ZNF251Q9BRH9 671 aa12.9□□□□□ -0.34
MKS1-204ENST00000537529 C20orf24Q9BUV8 137 aa12.9□□□□□ -0.34
MKS1-204ENST00000537529 DYNLRB1Q9NP97 96 aa12.9□□□□□ -0.34
MKS1-204ENST00000537529 PPIAL4AQ9Y536 164 aa12.9□□□□□ -0.34
MKS1-204ENST00000537529 RAI1Q7Z5J4 1906 aaPredicted RBP12.89□□□□□ -0.35
MKS1-204ENST00000537529 MAP1LC3B2A6NCE7 125 aa12.89□□□□□ -0.35
MKS1-204ENST00000537529 SHISA9B4DS77 424 aa12.89□□□□□ -0.35
MKS1-204ENST00000537529 TMEM178BH3BS89 294 aa12.89□□□□□ -0.35
MKS1-204ENST00000537529 GFRA3O60609 400 aa12.89□□□□□ -0.35
MKS1-204ENST00000537529 AVPI1Q5T686 147 aa12.89□□□□□ -0.35
MKS1-204ENST00000537529 C1orf229Q6ZS94 237 aaPredicted RBP12.89□□□□□ -0.35
MKS1-204ENST00000537529 VKORC1L1Q8N0U8 176 aa12.89□□□□□ -0.35
MKS1-204ENST00000537529 ZCCHC24Q8N2G6 241 aaKnown RBP12.89□□□□□ -0.35
MKS1-204ENST00000537529 ZNF709Q8N972 641 aa12.89□□□□□ -0.35
MKS1-204ENST00000537529 OR10G4Q8NGN3 311 aa12.89□□□□□ -0.35
MKS1-204ENST00000537529 MAP1LC3BQ9GZQ8 125 aa12.89□□□□□ -0.35
MKS1-204ENST00000537529 CISD1Q9NZ45 108 aaKnown RBP12.89□□□□□ -0.35
MKS1-204ENST00000537529 PUS1Q9Y606 427 aaKnown RBP eCLIP12.89□□□□□ -0.35
MKS1-204ENST00000537529 ASPMQ8IZT6 3477 aa12.89□□□□□ -0.35
MKS1-204ENST00000537529 COLCA2A8K830 154 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms