RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 HARBI1Q96MB7 349 aa13.38□□□□□ -0.27
SFSWAP-205ENST00000537164 AURKAIP1Q9NWT8 199 aaPredicted RBP13.38□□□□□ -0.27
SFSWAP-205ENST00000537164 VSIG4Q9Y279 399 aa13.38□□□□□ -0.27
SFSWAP-205ENST00000537164 IGKV1D-13A0A0B4J2D9 117 aa13.37□□□□□ -0.27
SFSWAP-205ENST00000537164 A0A1W2PN81 502 aa13.37□□□□□ -0.27
SFSWAP-205ENST00000537164 PRB2P02812 416 aaPredicted RBP13.37□□□□□ -0.27
SFSWAP-205ENST00000537164 SMIM18P0DKX4 95 aa13.37□□□□□ -0.27
SFSWAP-205ENST00000537164 IGKV1-13P0DP09 117 aa13.37□□□□□ -0.27
SFSWAP-205ENST00000537164 CHRNA7P36544 502 aa13.37□□□□□ -0.27
SFSWAP-205ENST00000537164 CBX5P45973 191 aa13.37□□□□□ -0.27
SFSWAP-205ENST00000537164 EIF4EBP1Q13541 118 aaPredicted RBP13.37□□□□□ -0.27
SFSWAP-205ENST00000537164 MSMO1Q15800 293 aa13.37□□□□□ -0.27
SFSWAP-205ENST00000537164 ECSCRQ19T08 205 aa13.37□□□□□ -0.27
SFSWAP-205ENST00000537164 MRGPRG-AS1Q2M3A8 158 aa13.37□□□□□ -0.27
SFSWAP-205ENST00000537164 DEFB136Q30KP8 78 aa13.37□□□□□ -0.27
SFSWAP-205ENST00000537164 OSR1Q8TAX0 266 aaPredicted RBP13.37□□□□□ -0.27
SFSWAP-205ENST00000537164 ARPC1AQ92747 370 aa13.37□□□□□ -0.27
SFSWAP-205ENST00000537164 DUX3Q96PT4 197 aa13.37□□□□□ -0.27
SFSWAP-205ENST00000537164 CLCC1Q96S66 551 aa13.37□□□□□ -0.27
SFSWAP-205ENST00000537164 RBMX2Q9Y388 322 aaKnown RBP13.37□□□□□ -0.27
SFSWAP-205ENST00000537164 COL7A1Q02388 2944 aa13.36□□□□□ -0.27
SFSWAP-205ENST00000537164 ARPC1BO15143 372 aaKnown RBP13.36□□□□□ -0.27
SFSWAP-205ENST00000537164 SHOXO15266 292 aa13.36□□□□□ -0.27
SFSWAP-205ENST00000537164 NCS1P62166 190 aa13.36□□□□□ -0.27
SFSWAP-205ENST00000537164 FXYD3Q14802 87 aa13.36□□□□□ -0.27
SFSWAP-205ENST00000537164 ACTBL2Q562R1 376 aa13.36□□□□□ -0.27
SFSWAP-205ENST00000537164 SAMD12Q8N8I0 201 aa13.36□□□□□ -0.27
SFSWAP-205ENST00000537164 TEX45Q8NA69 505 aa13.36□□□□□ -0.27
SFSWAP-205ENST00000537164 LFNGQ8NES3 379 aa13.36□□□□□ -0.27
SFSWAP-205ENST00000537164 SNAPC3Q92966 411 aa13.36□□□□□ -0.27
SFSWAP-205ENST00000537164 CMTM3Q96MX0 182 aa13.36□□□□□ -0.27
SFSWAP-205ENST00000537164 FAM103A1Q9BTL3 118 aaKnown RBP13.36□□□□□ -0.27
SFSWAP-205ENST00000537164 GNB4Q9HAV0 340 aa13.36□□□□□ -0.27
SFSWAP-205ENST00000537164 ANAPC10Q9UM13 185 aa13.36□□□□□ -0.27
SFSWAP-205ENST00000537164 PTHLHP12272 177 aa13.35□□□□□ -0.27
SFSWAP-205ENST00000537164 ARPC4P59998 168 aa13.35□□□□□ -0.27
SFSWAP-205ENST00000537164 UBE2KP61086 200 aa13.35□□□□□ -0.27
SFSWAP-205ENST00000537164 VBP1P61758 197 aa13.35□□□□□ -0.27
SFSWAP-205ENST00000537164 PJVKQ0ZLH3 352 aa13.35□□□□□ -0.27
SFSWAP-205ENST00000537164 UNQ5815/PRO19632Q6UWF5 114 aa13.35□□□□□ -0.27
SFSWAP-205ENST00000537164 ANKRD13BQ86YJ7 626 aa13.35□□□□□ -0.27
SFSWAP-205ENST00000537164 OR11H1Q8NG94 326 aa13.35□□□□□ -0.27
SFSWAP-205ENST00000537164 OR5AP2Q8NGF4 316 aa13.35□□□□□ -0.27
SFSWAP-205ENST00000537164 TMEM68Q96MH6 324 aa13.35□□□□□ -0.27
SFSWAP-205ENST00000537164 HSD17B10Q99714 261 aaKnown RBP13.35□□□□□ -0.27
SFSWAP-205ENST00000537164 SLA2Q9H6Q3 261 aa13.35□□□□□ -0.27
SFSWAP-205ENST00000537164 BRI3O95415 125 aa13.34□□□□□ -0.27
SFSWAP-205ENST00000537164 CRYZL1O95825 349 aa13.34□□□□□ -0.27
SFSWAP-205ENST00000537164 KRTAP10-11P60412 298 aa13.34□□□□□ -0.27
SFSWAP-205ENST00000537164 RPL30P62888 115 aaKnown RBP13.34□□□□□ -0.27
SFSWAP-205ENST00000537164 CTF1Q16619 201 aa13.34□□□□□ -0.27
SFSWAP-205ENST00000537164 VMA21Q3ZAQ7 101 aa13.34□□□□□ -0.27
SFSWAP-205ENST00000537164 KCTD9Q7L273 389 aa13.34□□□□□ -0.27
SFSWAP-205ENST00000537164 ABHD5Q8WTS1 349 aa13.34□□□□□ -0.27
SFSWAP-205ENST00000537164 GIMAP1Q8WWP7 306 aa13.34□□□□□ -0.27
SFSWAP-205ENST00000537164 PRELID3BQ9Y3B1 194 aa13.34□□□□□ -0.27
SFSWAP-205ENST00000537164 A3GALT2U3KPV4 340 aa13.34□□□□□ -0.27
SFSWAP-205ENST00000537164 H3BUA1 57 aa13.33□□□□□ -0.28
SFSWAP-205ENST00000537164 J3QRK9 145 aa13.33□□□□□ -0.28
SFSWAP-205ENST00000537164 GABARAPO95166 117 aa13.33□□□□□ -0.28
SFSWAP-205ENST00000537164 APOA1P02647 267 aa13.33□□□□□ -0.28
SFSWAP-205ENST00000537164 OR8U8P0C7N1 319 aa13.33□□□□□ -0.28
SFSWAP-205ENST00000537164 NAT1P18440 290 aa13.33□□□□□ -0.28
SFSWAP-205ENST00000537164 FCGR2CP31995 323 aa13.33□□□□□ -0.28
SFSWAP-205ENST00000537164 BRWD1-AS2P59051 145 aa13.33□□□□□ -0.28
SFSWAP-205ENST00000537164 TAS2R20P59543 309 aa13.33□□□□□ -0.28
SFSWAP-205ENST00000537164 GNB1P62873 340 aa13.33□□□□□ -0.28
SFSWAP-205ENST00000537164 ZNF616Q08AN1 781 aa13.33□□□□□ -0.28
SFSWAP-205ENST00000537164 TMEM69Q5SWH9 247 aa13.33□□□□□ -0.28
SFSWAP-205ENST00000537164 ASPHD1Q5U4P2 390 aa13.33□□□□□ -0.28
SFSWAP-205ENST00000537164 ZNF66Q6ZN08 573 aa13.33□□□□□ -0.28
SFSWAP-205ENST00000537164 ACOT12Q8WYK0 555 aa13.33□□□□□ -0.28
SFSWAP-205ENST00000537164 MRPS7Q9Y2R9 242 aaKnown RBP13.33□□□□□ -0.28
SFSWAP-205ENST00000537164 FCGR3BO75015 233 aa13.32□□□□□ -0.28
SFSWAP-205ENST00000537164 CNIH1O95406 144 aa13.32□□□□□ -0.28
SFSWAP-205ENST00000537164 PPYP01298 95 aa13.32□□□□□ -0.28
SFSWAP-205ENST00000537164 LGALS1P09382 135 aaKnown RBP13.32□□□□□ -0.28
SFSWAP-205ENST00000537164 AADACP22760 399 aa13.32□□□□□ -0.28
SFSWAP-205ENST00000537164 CD40LGP29965 261 aa13.32□□□□□ -0.28
SFSWAP-205ENST00000537164 CDK10Q15131 360 aa13.32□□□□□ -0.28
SFSWAP-205ENST00000537164 PRSS8Q16651 343 aa13.32□□□□□ -0.28
SFSWAP-205ENST00000537164 MFSD4AQ8N468 514 aa13.32□□□□□ -0.28
SFSWAP-205ENST00000537164 ZBTB34Q8NCN2 500 aa13.32□□□□□ -0.28
SFSWAP-205ENST00000537164 OR1N2Q8NGR9 330 aa13.32□□□□□ -0.28
SFSWAP-205ENST00000537164 GRPEL2Q8TAA5 225 aa13.32□□□□□ -0.28
SFSWAP-205ENST00000537164 MRAPQ8TCY5 172 aa13.32□□□□□ -0.28
SFSWAP-205ENST00000537164 DPF1Q92782 380 aa13.32□□□□□ -0.28
SFSWAP-205ENST00000537164 ZMAT5Q9UDW3 170 aaKnown RBP13.32□□□□□ -0.28
SFSWAP-205ENST00000537164 EIF4EP06730 217 aaKnown RBP13.31□□□□□ -0.28
SFSWAP-205ENST00000537164 HOXD3P31249 432 aaPredicted RBP13.31□□□□□ -0.28
SFSWAP-205ENST00000537164 DHRS11Q6UWP2 260 aa13.31□□□□□ -0.28
SFSWAP-205ENST00000537164 POC5Q8NA72 575 aa13.31□□□□□ -0.28
SFSWAP-205ENST00000537164 CASTOR1Q8WTX7 329 aa13.31□□□□□ -0.28
SFSWAP-205ENST00000537164 RHOVQ96L33 236 aa13.31□□□□□ -0.28
SFSWAP-205ENST00000537164 MRPS26Q9BYN8 205 aaKnown RBP13.31□□□□□ -0.28
SFSWAP-205ENST00000537164 NAA50Q9GZZ1 169 aaKnown RBP13.31□□□□□ -0.28
SFSWAP-205ENST00000537164 MEIS3P1A6NDR6 274 aa13.3□□□□□ -0.28
SFSWAP-205ENST00000537164 K7EIL1 84 aa13.3□□□□□ -0.28
SFSWAP-205ENST00000537164 SAA1P0DJI8 122 aaPredicted RBP13.3□□□□□ -0.28
SFSWAP-205ENST00000537164 PRSS3P35030 304 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms