RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 LSM10Q969L4 123 aaKnown RBP4.63□□□□□ -1.67
PTPRD-213ENST00000537002 DERL1Q9BUN8 251 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 PRR32B1ATL7 298 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 H0Y980 276 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 CORTO00230 105 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 SLC17A3O00476 420 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 GCSHP23434 173 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 CEACAM3P40198 252 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 IBA57Q5T440 356 aaKnown RBP4.63□□□□□ -1.67
PTPRD-213ENST00000537002 CDPF1Q6NVV7 123 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 OR2T6Q8NHC8 308 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 MENTQ9BUN1 341 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 QTRT1Q9BXR0 403 aaKnown RBP4.63□□□□□ -1.67
PTPRD-213ENST00000537002 IL36GQ9NZH8 169 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 OR2W1Q9Y3N9 320 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 IGKV1-8A0A0C4DH67 115 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 SHISA7A6NL88 538 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 NUDT3O95989 172 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 DEFA4P12838 97 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 CD38P28907 300 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 PRSS8Q16651 343 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 UNQ6494/PRO21346Q6UXR6 183 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 PRRC2BQ5JSZ5 2229 aaKnown RBP4.63□□□□□ -1.67
PTPRD-213ENST00000537002 IGLV3-21P80748 117 aaPredicted RBP4.63□□□□□ -1.67
PTPRD-213ENST00000537002 UNQ5815/PRO19632Q6UWF5 114 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 OR5P3Q8WZ94 311 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 FLYWCH2Q96CP2 140 aaKnown RBP4.63□□□□□ -1.67
PTPRD-213ENST00000537002 BOKQ9UMX3 212 aaPredicted RBP4.63□□□□□ -1.67
PTPRD-213ENST00000537002 LEPROTL1O95214 131 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 NBEAP1P0C6P0 100 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 RPL23P62829 140 aaKnown RBP4.63□□□□□ -1.67
PTPRD-213ENST00000537002 SEC11AP67812 179 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 TPTE2P1Q5T6R2 138 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 SP5Q6BEB4 398 aaPredicted RBP4.63□□□□□ -1.67
PTPRD-213ENST00000537002 ZNF818PQ6ZRF7 136 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 GNB1LQ9BYB4 327 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 TAAR3PQ9P1P4 343 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 IGKV1D-42A0A075B6H8 117 aa4.62□□□□□ -1.67
PTPRD-213ENST00000537002 LIPT2A6NK58 231 aa4.62□□□□□ -1.67
PTPRD-213ENST00000537002 C9orf172C9J069 976 aa4.62□□□□□ -1.67
PTPRD-213ENST00000537002 F2RP25116 425 aa4.62□□□□□ -1.67
PTPRD-213ENST00000537002 FAM19A2Q8N3H0 131 aa4.62□□□□□ -1.67
PTPRD-213ENST00000537002 FAM206AQ9NX38 181 aa4.62□□□□□ -1.67
PTPRD-213ENST00000537002 HILPDAQ9Y5L2 63 aa4.62□□□□□ -1.67
PTPRD-213ENST00000537002 A0A1W2PRS3 328 aa4.62□□□□□ -1.67
PTPRD-213ENST00000537002 LPAL2Q16609 132 aa4.62□□□□□ -1.67
PTPRD-213ENST00000537002 FNDC7Q5VTL7 733 aa4.62□□□□□ -1.67
PTPRD-213ENST00000537002 PQLC2Q6ZP29 291 aa4.62□□□□□ -1.67
PTPRD-213ENST00000537002 POM121L2Q96KW2 1035 aa4.62□□□□□ -1.67
PTPRD-213ENST00000537002 ZNF488Q96MN9 340 aa4.62□□□□□ -1.67
PTPRD-213ENST00000537002 SSBP4Q9BWG4 385 aaPredicted RBP4.62□□□□□ -1.67
PTPRD-213ENST00000537002 ZNHIT1O43257 154 aa4.62□□□□□ -1.67
PTPRD-213ENST00000537002 PGLYRP1O75594 196 aaPredicted RBP4.62□□□□□ -1.67
PTPRD-213ENST00000537002 CD1BP29016 333 aa4.62□□□□□ -1.67
PTPRD-213ENST00000537002 RBM11P57052 281 aaKnown RBP4.62□□□□□ -1.67
PTPRD-213ENST00000537002 SPEM2Q0P670 501 aa4.62□□□□□ -1.67
PTPRD-213ENST00000537002 SLC23A3Q6PIS1 610 aa4.62□□□□□ -1.67
PTPRD-213ENST00000537002 OR5A1Q8NGJ0 315 aa4.62□□□□□ -1.67
PTPRD-213ENST00000537002 RPRMQ9NS64 109 aa4.62□□□□□ -1.67
PTPRD-213ENST00000537002 OR51B2Q9Y5P1 312 aa4.62□□□□□ -1.67
PTPRD-213ENST00000537002 DOCK9Q9BZ29 2069 aa4.62□□□□□ -1.67
PTPRD-213ENST00000537002 LOC389332A0A1B0GUA5 103 aa4.62□□□□□ -1.67
PTPRD-213ENST00000537002 PRR33A8MZF0 331 aa4.62□□□□□ -1.67
PTPRD-213ENST00000537002 HLA-DRB1P01911 266 aa4.62□□□□□ -1.67
PTPRD-213ENST00000537002 ERHP84090 104 aaKnown RBP4.62□□□□□ -1.67
PTPRD-213ENST00000537002 SNAI3Q3KNW1 292 aa4.62□□□□□ -1.67
PTPRD-213ENST00000537002 SSBP3Q9BWW4 388 aaPredicted RBP4.62□□□□□ -1.67
PTPRD-213ENST00000537002 SPAG17Q6Q759 2223 aa4.62□□□□□ -1.67
PTPRD-213ENST00000537002 H3BUT2 72 aa4.62□□□□□ -1.67
PTPRD-213ENST00000537002 SCTP09683 121 aa4.62□□□□□ -1.67
PTPRD-213ENST00000537002 IGLC2P0DOY2 106 aa4.62□□□□□ -1.67
PTPRD-213ENST00000537002 IGLC3P0DOY3 106 aa4.62□□□□□ -1.67
PTPRD-213ENST00000537002 CTSSP25774 331 aa4.62□□□□□ -1.67
PTPRD-213ENST00000537002 OPRK1P41145 380 aa4.62□□□□□ -1.67
PTPRD-213ENST00000537002 ALKBH6Q3KRA9 238 aa4.62□□□□□ -1.67
PTPRD-213ENST00000537002 MIC13Q5XKP0 118 aa4.62□□□□□ -1.67
PTPRD-213ENST00000537002 TMEM144Q7Z5S9 345 aa4.62□□□□□ -1.67
PTPRD-213ENST00000537002 DEFB108BQ8NET1 73 aa4.62□□□□□ -1.67
PTPRD-213ENST00000537002 OR1L4Q8NGR5 311 aa4.62□□□□□ -1.67
PTPRD-213ENST00000537002 HS3ST3A1Q9Y663 406 aa4.62□□□□□ -1.67
PTPRD-213ENST00000537002 SCN5AQ14524 2016 aa4.62□□□□□ -1.67
PTPRD-213ENST00000537002 TRAV9-2A0A087WT02 112 aa4.62□□□□□ -1.67
PTPRD-213ENST00000537002 IL3RAP26951 378 aa4.62□□□□□ -1.67
PTPRD-213ENST00000537002 REG1BP48304 166 aa4.62□□□□□ -1.67
PTPRD-213ENST00000537002 LRRC75BQ2VPJ9 315 aa4.62□□□□□ -1.67
PTPRD-213ENST00000537002 SLC35E4Q6ICL7 350 aa4.62□□□□□ -1.67
PTPRD-213ENST00000537002 RPL7P18124 248 aaKnown RBP4.61□□□□□ -1.67
PTPRD-213ENST00000537002 TM4SF20Q53R12 229 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 C1orf185Q5T7R7 199 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 HES4Q9HCC6 221 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 FAM60AQ9NP50 221 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 NRN1Q9NPD7 142 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 SPCS1Q9Y6A9 102 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 SELENOKQ9Y6D0 94 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 FRMPD3Q5JV73 1810 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 COL4A6Q14031 1691 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 LINC01565O15544 149 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 ORM2P19652 201 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 PSMB2P49721 201 aa4.61□□□□□ -1.67
PTPRD-213ENST00000537002 TFF2Q03403 129 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms