RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 OXA1LQ15070 435 aa13.07□□□□□ -0.32
VAMP1-205ENST00000535927 TRIM16LQ309B1 348 aa13.07□□□□□ -0.32
VAMP1-205ENST00000535927 TMEM177Q53S58 311 aa13.07□□□□□ -0.32
VAMP1-205ENST00000535927 CCBE1Q6UXH8 406 aaPredicted RBP13.07□□□□□ -0.32
VAMP1-205ENST00000535927 Q71RC1 249 aaPredicted RBP13.07□□□□□ -0.32
VAMP1-205ENST00000535927 ZNF418Q8TF45 676 aaPredicted RBP13.07□□□□□ -0.32
VAMP1-205ENST00000535927 CHPT1Q8WUD6 406 aa13.07□□□□□ -0.32
VAMP1-205ENST00000535927 IL22RA2Q969J5 263 aa13.07□□□□□ -0.32
VAMP1-205ENST00000535927 C5orf30Q96GV9 206 aa13.07□□□□□ -0.32
VAMP1-205ENST00000535927 SSX3Q99909 188 aa13.07□□□□□ -0.32
VAMP1-205ENST00000535927 GPN1Q9HCN4 374 aaPredicted RBP13.07□□□□□ -0.32
VAMP1-205ENST00000535927 C1RLQ9NZP8 487 aa13.07□□□□□ -0.32
VAMP1-205ENST00000535927 COMMD9Q9P000 198 aa13.07□□□□□ -0.32
VAMP1-205ENST00000535927 A0A0B4J2A0 478 aa13.06□□□□□ -0.32
VAMP1-205ENST00000535927 LINC00473A8K010 186 aa13.06□□□□□ -0.32
VAMP1-205ENST00000535927 IFNA2P01563 188 aa13.06□□□□□ -0.32
VAMP1-205ENST00000535927 SERPINE2P07093 398 aa13.06□□□□□ -0.32
VAMP1-205ENST00000535927 AKR1C4P17516 323 aa13.06□□□□□ -0.32
VAMP1-205ENST00000535927 UCP1P25874 307 aa13.06□□□□□ -0.32
VAMP1-205ENST00000535927 DIAPH2-AS1Q14236 149 aa13.06□□□□□ -0.32
VAMP1-205ENST00000535927 DEFB112Q30KQ8 113 aa13.06□□□□□ -0.32
VAMP1-205ENST00000535927 TMED4Q7Z7H5 227 aa13.06□□□□□ -0.32
VAMP1-205ENST00000535927 SPAG16Q8N0X2 631 aa13.06□□□□□ -0.32
VAMP1-205ENST00000535927 TSNAXQ99598 290 aaKnown RBP13.06□□□□□ -0.32
VAMP1-205ENST00000535927 TMEM222Q9H0R3 208 aa13.06□□□□□ -0.32
VAMP1-205ENST00000535927 RAB18Q9NP72 206 aa13.06□□□□□ -0.32
VAMP1-205ENST00000535927 SHPKQ9UHJ6 478 aa13.06□□□□□ -0.32
VAMP1-205ENST00000535927 FN1P02751 2386 aaKnown RBP13.06□□□□□ -0.32
VAMP1-205ENST00000535927 DUXBA0A1W2PPF3 345 aa13.05□□□□□ -0.32
VAMP1-205ENST00000535927 SNRPGP15A8MWD9 76 aa13.05□□□□□ -0.32
VAMP1-205ENST00000535927 CLDN34H7C241 214 aa13.05□□□□□ -0.32
VAMP1-205ENST00000535927 H7C2Y5 167 aa13.05□□□□□ -0.32
VAMP1-205ENST00000535927 M0QZK8 103 aa13.05□□□□□ -0.32
VAMP1-205ENST00000535927 VENTXO95231 258 aa13.05□□□□□ -0.32
VAMP1-205ENST00000535927 SPDEFO95238 335 aa13.05□□□□□ -0.32
VAMP1-205ENST00000535927 SFT2D2O95562 160 aa13.05□□□□□ -0.32
VAMP1-205ENST00000535927 FGF2P09038 288 aa13.05□□□□□ -0.32
VAMP1-205ENST00000535927 OR4E1P0C645 316 aa13.05□□□□□ -0.32
VAMP1-205ENST00000535927 PI3P19957 117 aa13.05□□□□□ -0.32
VAMP1-205ENST00000535927 IER3P46695 156 aa13.05□□□□□ -0.32
VAMP1-205ENST00000535927 REG1BP48304 166 aa13.05□□□□□ -0.32
VAMP1-205ENST00000535927 RPL15P61313 204 aaKnown RBP13.05□□□□□ -0.32
VAMP1-205ENST00000535927 DYNAPQ8N1N2 210 aa13.05□□□□□ -0.32
VAMP1-205ENST00000535927 LRTM2Q8N967 370 aa13.05□□□□□ -0.32
VAMP1-205ENST00000535927 DRAXINQ8NBI3 349 aaPredicted RBP13.05□□□□□ -0.32
VAMP1-205ENST00000535927 OR51H1Q8NH63 302 aa13.05□□□□□ -0.32
VAMP1-205ENST00000535927 VSTM2AQ8TAG5 236 aa13.05□□□□□ -0.32
VAMP1-205ENST00000535927 CACFD1Q9UGQ2 172 aa13.05□□□□□ -0.32
VAMP1-205ENST00000535927 TRAV6A0A075B6T7 132 aa13.04□□□□□ -0.32
VAMP1-205ENST00000535927 TNFSF12O43508 249 aa13.04□□□□□ -0.32
VAMP1-205ENST00000535927 FCGR3BO75015 233 aa13.04□□□□□ -0.32
VAMP1-205ENST00000535927 DUS4LO95620 317 aaKnown RBP13.04□□□□□ -0.32
VAMP1-205ENST00000535927 CDS2O95674 445 aa13.04□□□□□ -0.32
VAMP1-205ENST00000535927 NQO2P16083 231 aa13.04□□□□□ -0.32
VAMP1-205ENST00000535927 RAB25P57735 213 aa13.04□□□□□ -0.32
VAMP1-205ENST00000535927 RPL30P62888 115 aaKnown RBP13.04□□□□□ -0.32
VAMP1-205ENST00000535927 POU2AF1Q16633 256 aa13.04□□□□□ -0.32
VAMP1-205ENST00000535927 C4orf46Q504U0 113 aa13.04□□□□□ -0.32
VAMP1-205ENST00000535927 LYG2Q86SG7 212 aa13.04□□□□□ -0.32
VAMP1-205ENST00000535927 BCL6BQ8N143 479 aaPredicted RBP13.04□□□□□ -0.32
VAMP1-205ENST00000535927 LGI3Q8N145 548 aa13.04□□□□□ -0.32
VAMP1-205ENST00000535927 ADAD2Q8NCV1 583 aaKnown RBP13.04□□□□□ -0.32
VAMP1-205ENST00000535927 GLYATL2Q8WU03 294 aa13.04□□□□□ -0.32
VAMP1-205ENST00000535927 C17orf50Q8WW18 174 aa13.04□□□□□ -0.32
VAMP1-205ENST00000535927 CAPSLQ8WWF8 208 aa13.04□□□□□ -0.32
VAMP1-205ENST00000535927 TMEM230Q96A57 120 aa13.04□□□□□ -0.32
VAMP1-205ENST00000535927 TMEM56Q96MV1 263 aa13.04□□□□□ -0.32
VAMP1-205ENST00000535927 TMEM56-RWDD3S4R434 201 aa13.04□□□□□ -0.32
VAMP1-205ENST00000535927 C9orf170A2RU37 121 aa13.03□□□□□ -0.32
VAMP1-205ENST00000535927 SNRNP70P08621 437 aaKnown RBP13.03□□□□□ -0.32
VAMP1-205ENST00000535927 DHRS2Q13268 280 aa13.03□□□□□ -0.32
VAMP1-205ENST00000535927 GLDNQ6ZMI3 551 aaPredicted RBP13.03□□□□□ -0.32
VAMP1-205ENST00000535927 FAM219AQ8IW50 185 aa13.03□□□□□ -0.32
VAMP1-205ENST00000535927 NPBQ8NG41 125 aa13.03□□□□□ -0.32
VAMP1-205ENST00000535927 COQ8AQ8NI60 647 aa13.03□□□□□ -0.32
VAMP1-205ENST00000535927 EAF1Q96JC9 268 aaPredicted RBP13.03□□□□□ -0.32
VAMP1-205ENST00000535927 FLVCR2Q9UPI3 526 aa13.03□□□□□ -0.32
VAMP1-205ENST00000535927 TCF19Q9Y242 345 aa13.03□□□□□ -0.32
VAMP1-205ENST00000535927 ATRQ13535 2644 aa13.02□□□□□ -0.32
VAMP1-205ENST00000535927 INAFM1C9JVW0 142 aa13.02□□□□□ -0.33
VAMP1-205ENST00000535927 SHOXO15266 292 aa13.02□□□□□ -0.33
VAMP1-205ENST00000535927 FGF16O43320 207 aa13.02□□□□□ -0.33
VAMP1-205ENST00000535927 CREBL2O60519 120 aaPredicted RBP13.02□□□□□ -0.33
VAMP1-205ENST00000535927 OR2F2O95006 317 aa13.02□□□□□ -0.33
VAMP1-205ENST00000535927 IGKV1D-33P01593 117 aa13.02□□□□□ -0.33
VAMP1-205ENST00000535927 IGKV1-33P01594 117 aa13.02□□□□□ -0.33
VAMP1-205ENST00000535927 HLA-AP01891 365 aaKnown RBP13.02□□□□□ -0.33
VAMP1-205ENST00000535927 VAMP1P23763 118 aa13.02□□□□□ -0.33
VAMP1-205ENST00000535927 LPAR6P43657 344 aa13.02□□□□□ -0.33
VAMP1-205ENST00000535927 BRWD1-AS2P59051 145 aa13.02□□□□□ -0.33
VAMP1-205ENST00000535927 ERVK-16P61578 105 aa13.02□□□□□ -0.33
VAMP1-205ENST00000535927 RPS16P62249 146 aaKnown RBP13.02□□□□□ -0.33
VAMP1-205ENST00000535927 SUPT4H1P63272 117 aaKnown RBP13.02□□□□□ -0.33
VAMP1-205ENST00000535927 PPP1R1AQ13522 171 aa13.02□□□□□ -0.33
VAMP1-205ENST00000535927 HES1Q14469 280 aa13.02□□□□□ -0.33
VAMP1-205ENST00000535927 TMEM187Q14656 261 aa13.02□□□□□ -0.33
VAMP1-205ENST00000535927 VMA21Q3ZAQ7 101 aa13.02□□□□□ -0.33
VAMP1-205ENST00000535927 ZNF585BQ52M93 769 aa13.02□□□□□ -0.33
VAMP1-205ENST00000535927 Q8N6K4 173 aa13.02□□□□□ -0.33
VAMP1-205ENST00000535927 TEX45Q8NA69 505 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms