RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 RPL15P61313 204 aaKnown RBP11.22□□□□□ -0.61
HDAC4-214ENST00000535493 PPP1CBP62140 327 aa11.22□□□□□ -0.61
HDAC4-214ENST00000535493 ACOT6Q3I5F7 207 aaPredicted RBP11.22□□□□□ -0.61
HDAC4-214ENST00000535493 LBHQ53QV2 105 aaPredicted RBP11.22□□□□□ -0.61
HDAC4-214ENST00000535493 LINC00696Q6ZRV3 163 aa11.22□□□□□ -0.61
HDAC4-214ENST00000535493 CISD2Q8N5K1 135 aaKnown RBP11.22□□□□□ -0.61
HDAC4-214ENST00000535493 APH1AQ96BI3 265 aa11.22□□□□□ -0.61
HDAC4-214ENST00000535493 ANAPC16Q96DE5 110 aa11.22□□□□□ -0.61
HDAC4-214ENST00000535493 C12orf77C9JDV5 145 aa11.22□□□□□ -0.61
HDAC4-214ENST00000535493 CD82P27701 267 aa11.22□□□□□ -0.61
HDAC4-214ENST00000535493 KCNIP4Q6PIL6 250 aa11.22□□□□□ -0.61
HDAC4-214ENST00000535493 Q6ZR03 302 aa11.22□□□□□ -0.61
HDAC4-214ENST00000535493 TRBV6-6A0A0A6YYG2 114 aa11.22□□□□□ -0.61
HDAC4-214ENST00000535493 M0R143 59 aa11.22□□□□□ -0.61
HDAC4-214ENST00000535493 ARFGEF3Q5TH69 2177 aa11.22□□□□□ -0.61
HDAC4-214ENST00000535493 ASPHD1Q5U4P2 390 aa11.22□□□□□ -0.61
HDAC4-214ENST00000535493 TIPARPQ7Z3E1 657 aaKnown RBP11.22□□□□□ -0.61
HDAC4-214ENST00000535493 MDP1Q86V88 176 aa11.22□□□□□ -0.61
HDAC4-214ENST00000535493 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.22□□□□□ -0.61
HDAC4-214ENST00000535493 TNRC18O15417 2968 aaPredicted RBP11.21□□□□□ -0.61
HDAC4-214ENST00000535493 SCO2A0A1W2PP80 73 aa11.21□□□□□ -0.61
HDAC4-214ENST00000535493 SYNGR4O95473 234 aa11.21□□□□□ -0.61
HDAC4-214ENST00000535493 HPRT1P00492 218 aa11.21□□□□□ -0.61
HDAC4-214ENST00000535493 NPSP0C0P6 89 aa11.21□□□□□ -0.61
HDAC4-214ENST00000535493 CLDN18P56856 261 aa11.21□□□□□ -0.61
HDAC4-214ENST00000535493 HLA-DRB5Q30154 266 aa11.21□□□□□ -0.61
HDAC4-214ENST00000535493 QTRT1Q9BXR0 403 aaKnown RBP11.21□□□□□ -0.61
HDAC4-214ENST00000535493 FZR1Q9UM11 496 aa11.21□□□□□ -0.61
HDAC4-214ENST00000535493 PPIAL4AQ9Y536 164 aa11.21□□□□□ -0.61
HDAC4-214ENST00000535493 TNRC6AQ8NDV7 1962 aaKnown RBP11.21□□□□□ -0.62
HDAC4-214ENST00000535493 TNCP24821 2201 aa11.21□□□□□ -0.62
HDAC4-214ENST00000535493 J3QT63 122 aa11.21□□□□□ -0.62
HDAC4-214ENST00000535493 WNT2P09544 360 aa11.21□□□□□ -0.62
HDAC4-214ENST00000535493 IRF2P14316 349 aa11.21□□□□□ -0.62
HDAC4-214ENST00000535493 GABRA2P47869 451 aa11.21□□□□□ -0.62
HDAC4-214ENST00000535493 TDGF1P3P51864 188 aa11.21□□□□□ -0.62
HDAC4-214ENST00000535493 SLC35B1P78383 322 aa11.21□□□□□ -0.62
HDAC4-214ENST00000535493 C21orf62-AS1Q17RA5 79 aa11.21□□□□□ -0.62
HDAC4-214ENST00000535493 Q6ZWC4 215 aa11.21□□□□□ -0.62
HDAC4-214ENST00000535493 H2BFWTQ7Z2G1 175 aa11.21□□□□□ -0.62
HDAC4-214ENST00000535493 SSMEM1Q8WWF3 244 aa11.21□□□□□ -0.62
HDAC4-214ENST00000535493 FAM103A1Q9BTL3 118 aaKnown RBP11.21□□□□□ -0.62
HDAC4-214ENST00000535493 STRADBQ9C0K7 418 aa11.21□□□□□ -0.62
HDAC4-214ENST00000535493 ZDHHC11Q9H8X9 412 aa11.21□□□□□ -0.62
HDAC4-214ENST00000535493 TP53TG3Q9ULZ0 132 aa11.21□□□□□ -0.62
HDAC4-214ENST00000535493 PXMP4Q9Y6I8 212 aa11.21□□□□□ -0.62
HDAC4-214ENST00000535493 ADGRG4Q8IZF6 3080 aa11.2□□□□□ -0.62
HDAC4-214ENST00000535493 A0A1W2PPV4 95 aa11.2□□□□□ -0.62
HDAC4-214ENST00000535493 RRHO14718 337 aa11.2□□□□□ -0.62
HDAC4-214ENST00000535493 SS18L1O75177 396 aaPredicted RBP11.2□□□□□ -0.62
HDAC4-214ENST00000535493 ARL14EPLP0DKL9 152 aa11.2□□□□□ -0.62
HDAC4-214ENST00000535493 SRP14P37108 136 aaKnown RBP11.2□□□□□ -0.62
HDAC4-214ENST00000535493 TFPI2P48307 235 aa11.2□□□□□ -0.62
HDAC4-214ENST00000535493 RAB4BP61018 213 aa11.2□□□□□ -0.62
HDAC4-214ENST00000535493 ACSF3Q4G176 576 aaPredicted RBP11.2□□□□□ -0.62
HDAC4-214ENST00000535493 C1orf194Q5T5A4 169 aa11.2□□□□□ -0.62
HDAC4-214ENST00000535493 Q8N7P7 452 aa11.2□□□□□ -0.62
HDAC4-214ENST00000535493 TMEM105Q8N8V8 129 aa11.2□□□□□ -0.62
HDAC4-214ENST00000535493 MAFAQ8NHW3 353 aaPredicted RBP11.2□□□□□ -0.62
HDAC4-214ENST00000535493 VN1R17PQ8TDU5 208 aa11.2□□□□□ -0.62
HDAC4-214ENST00000535493 SFRP2Q96HF1 295 aa11.2□□□□□ -0.62
HDAC4-214ENST00000535493 METRNQ9UJH8 293 aa11.2□□□□□ -0.62
HDAC4-214ENST00000535493 OR5B21A6NL26 309 aa11.2□□□□□ -0.62
HDAC4-214ENST00000535493 AQP7O14520 342 aa11.2□□□□□ -0.62
HDAC4-214ENST00000535493 MLNRO43193 412 aa11.2□□□□□ -0.62
HDAC4-214ENST00000535493 HBZP02008 142 aa11.2□□□□□ -0.62
HDAC4-214ENST00000535493 SERPINA7P05543 415 aa11.2□□□□□ -0.62
HDAC4-214ENST00000535493 LPAL2Q16609 132 aa11.2□□□□□ -0.62
HDAC4-214ENST00000535493 MIC13Q5XKP0 118 aa11.2□□□□□ -0.62
HDAC4-214ENST00000535493 ZNF645Q8N7E2 425 aa11.2□□□□□ -0.62
HDAC4-214ENST00000535493 OCC1Q8TAD7 63 aa11.2□□□□□ -0.62
HDAC4-214ENST00000535493 GALMQ96C23 342 aa11.2□□□□□ -0.62
HDAC4-214ENST00000535493 ELOVL5Q9NYP7 299 aa11.2□□□□□ -0.62
HDAC4-214ENST00000535493 PSG11Q9UQ72 335 aa11.2□□□□□ -0.62
HDAC4-214ENST00000535493 TIMM9Q9Y5J7 89 aa11.2□□□□□ -0.62
HDAC4-214ENST00000535493 MPC1Q9Y5U8 109 aa11.2□□□□□ -0.62
HDAC4-214ENST00000535493 PCSK5Q92824 1860 aa11.2□□□□□ -0.62
HDAC4-214ENST00000535493 CSMD1Q96PZ7 3565 aa11.2□□□□□ -0.62
HDAC4-214ENST00000535493 ROS1P08922 2347 aa11.19□□□□□ -0.62
HDAC4-214ENST00000535493 NEURL1O76050 574 aa11.19□□□□□ -0.62
HDAC4-214ENST00000535493 RAC2P15153 192 aa11.19□□□□□ -0.62
HDAC4-214ENST00000535493 CCKARP32238 428 aa11.19□□□□□ -0.62
HDAC4-214ENST00000535493 CMTM2Q8TAZ6 248 aa11.19□□□□□ -0.62
HDAC4-214ENST00000535493 TMEM45BQ96B21 275 aa11.19□□□□□ -0.62
HDAC4-214ENST00000535493 TMEM68Q96MH6 324 aa11.19□□□□□ -0.62
HDAC4-214ENST00000535493 HSPB9Q9BQS6 159 aa11.19□□□□□ -0.62
HDAC4-214ENST00000535493 PARD6AQ9NPB6 346 aa11.19□□□□□ -0.62
HDAC4-214ENST00000535493 RNF114Q9Y508 228 aa11.19□□□□□ -0.62
HDAC4-214ENST00000535493 HCFC1P51610 2035 aa11.19□□□□□ -0.62
HDAC4-214ENST00000535493 SERF1AO75920 110 aa11.19□□□□□ -0.62
HDAC4-214ENST00000535493 TYMSP04818 313 aa11.19□□□□□ -0.62
HDAC4-214ENST00000535493 OR9G9P0C7N8 305 aa11.19□□□□□ -0.62
HDAC4-214ENST00000535493 LINC00310P59036 64 aa11.19□□□□□ -0.62
HDAC4-214ENST00000535493 MSMO1Q15800 293 aa11.19□□□□□ -0.62
HDAC4-214ENST00000535493 OR2M7Q8NG81 312 aa11.19□□□□□ -0.62
HDAC4-214ENST00000535493 LOXL2Q9Y4K0 774 aa11.19□□□□□ -0.62
HDAC4-214ENST00000535493 CEP250Q9BV73 2442 aa11.18□□□□□ -0.62
HDAC4-214ENST00000535493 IGKV3D-15A0A087WSY6 115 aa11.18□□□□□ -0.62
HDAC4-214ENST00000535493 MARCH11A6NNE9 402 aa11.18□□□□□ -0.62
HDAC4-214ENST00000535493 C15orf62A8K5M9 175 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms