RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 SERPINE3A8MV23 424 aa3.5□□□□□ -1.85
CASP4-213ENST00000534356 TEX46H3BTG2 121 aa3.5□□□□□ -1.85
CASP4-213ENST00000534356 FAAHO00519 579 aa3.5□□□□□ -1.85
CASP4-213ENST00000534356 PLPP3O14495 311 aa3.5□□□□□ -1.85
CASP4-213ENST00000534356 ZNF207O43670 478 aaKnown RBP3.5□□□□□ -1.85
CASP4-213ENST00000534356 DBIP07108 87 aaKnown RBP3.5□□□□□ -1.85
CASP4-213ENST00000534356 DUX4L2P0CJ85 424 aa3.5□□□□□ -1.85
CASP4-213ENST00000534356 DUX4L3P0CJ86 424 aa3.5□□□□□ -1.85
CASP4-213ENST00000534356 DUX4L5P0CJ88 424 aa3.5□□□□□ -1.85
CASP4-213ENST00000534356 DUX4L6P0CJ89 424 aa3.5□□□□□ -1.85
CASP4-213ENST00000534356 DUX4L7P0CJ90 424 aa3.5□□□□□ -1.85
CASP4-213ENST00000534356 OR5H8P0DN80 308 aa3.5□□□□□ -1.85
CASP4-213ENST00000534356 PRPS1L1P21108 318 aa3.5□□□□□ -1.85
CASP4-213ENST00000534356 FKBP2P26885 142 aaKnown RBP3.5□□□□□ -1.85
CASP4-213ENST00000534356 RND2P52198 227 aa3.5□□□□□ -1.85
CASP4-213ENST00000534356 GTF2A1P52655 376 aaPredicted RBP3.5□□□□□ -1.85
CASP4-213ENST00000534356 TNFAIP6P98066 277 aaPredicted RBP3.5□□□□□ -1.85
CASP4-213ENST00000534356 PSG4Q00888 419 aa3.5□□□□□ -1.85
CASP4-213ENST00000534356 FMODQ06828 376 aa3.5□□□□□ -1.85
CASP4-213ENST00000534356 PMS2P3Q13401 168 aa3.5□□□□□ -1.85
CASP4-213ENST00000534356 DEFB121Q5J5C9 76 aa3.5□□□□□ -1.85
CASP4-213ENST00000534356 PABPC1L2AQ5JQF8 200 aa3.5□□□□□ -1.85
CASP4-213ENST00000534356 OR5AS1Q8N127 324 aa3.5□□□□□ -1.85
CASP4-213ENST00000534356 OR2Z1Q8NG97 314 aa3.5□□□□□ -1.85
CASP4-213ENST00000534356 FAM81AQ8TBF8 368 aa3.5□□□□□ -1.85
CASP4-213ENST00000534356 SLC7A6Q92536 515 aa3.5□□□□□ -1.85
CASP4-213ENST00000534356 MCUR1Q96AQ8 359 aa3.5□□□□□ -1.85
CASP4-213ENST00000534356 PPP3R2Q96LZ3 170 aa3.5□□□□□ -1.85
CASP4-213ENST00000534356 ZNF317Q96PQ6 595 aaPredicted RBP3.5□□□□□ -1.85
CASP4-213ENST00000534356 TRNT1Q96Q11 434 aaKnown RBP3.5□□□□□ -1.85
CASP4-213ENST00000534356 RHOXF2Q9BQY4 288 aa3.5□□□□□ -1.85
CASP4-213ENST00000534356 OR51M1Q9H341 326 aa3.5□□□□□ -1.85
CASP4-213ENST00000534356 GEMIN7Q9H840 131 aaKnown RBP3.5□□□□□ -1.85
CASP4-213ENST00000534356 TMEM38BQ9NVV0 291 aa3.5□□□□□ -1.85
CASP4-213ENST00000534356 TAS2R5Q9NYW4 299 aa3.5□□□□□ -1.85
CASP4-213ENST00000534356 GLTPQ9NZD2 209 aa3.5□□□□□ -1.85
CASP4-213ENST00000534356 PTTG3PQ9NZH4 202 aa3.5□□□□□ -1.85
CASP4-213ENST00000534356 DUX4Q9UBX2 424 aa3.5□□□□□ -1.85
CASP4-213ENST00000534356 CHTOPQ9Y3Y2 248 aaKnown RBP3.5□□□□□ -1.85
CASP4-213ENST00000534356 DNAH7Q8WXX0 4024 aa3.49□□□□□ -1.85
CASP4-213ENST00000534356 LOC102725191A0A1B0GVB3 256 aa3.49□□□□□ -1.85
CASP4-213ENST00000534356 TMEM223A0PJW6 202 aa3.49□□□□□ -1.85
CASP4-213ENST00000534356 C5orf49A4QMS7 147 aa3.49□□□□□ -1.85
CASP4-213ENST00000534356 TMEM114B3SHH9 223 aa3.49□□□□□ -1.85
CASP4-213ENST00000534356 AIM2O14862 343 aa3.49□□□□□ -1.85
CASP4-213ENST00000534356 UBL3O95164 117 aa3.49□□□□□ -1.85
CASP4-213ENST00000534356 TFF1P04155 84 aa3.49□□□□□ -1.85
CASP4-213ENST00000534356 GUSBP08236 651 aa3.49□□□□□ -1.85
CASP4-213ENST00000534356 LINC00869P0C866 280 aa3.49□□□□□ -1.85
CASP4-213ENST00000534356 CD28P10747 220 aa3.49□□□□□ -1.85
CASP4-213ENST00000534356 NQO1P15559 274 aaKnown RBP3.49□□□□□ -1.85
CASP4-213ENST00000534356 TUBG1P23258 451 aa3.49□□□□□ -1.85
CASP4-213ENST00000534356 STOMP27105 288 aa3.49□□□□□ -1.85
CASP4-213ENST00000534356 GPX4P36969 197 aaPredicted RBP3.49□□□□□ -1.85
CASP4-213ENST00000534356 CFHR2P36980 270 aa3.49□□□□□ -1.85
CASP4-213ENST00000534356 NAA10P41227 235 aaPredicted RBP3.49□□□□□ -1.85
CASP4-213ENST00000534356 PPP1CBP62140 327 aa3.49□□□□□ -1.85
CASP4-213ENST00000534356 EMX2Q04743 252 aa3.49□□□□□ -1.85
CASP4-213ENST00000534356 C8orf74Q6P047 294 aa3.49□□□□□ -1.85
CASP4-213ENST00000534356 ZNF880Q6PDB4 577 aa3.49□□□□□ -1.85
CASP4-213ENST00000534356 SLC35D2Q76EJ3 337 aa3.49□□□□□ -1.85
CASP4-213ENST00000534356 SLC16A14Q7RTX9 510 aa3.49□□□□□ -1.85
CASP4-213ENST00000534356 RBM45Q8IUH3 476 aaKnown RBP3.49□□□□□ -1.85
CASP4-213ENST00000534356 LRRC34Q8IZ02 419 aa3.49□□□□□ -1.85
CASP4-213ENST00000534356 TEX29Q8N6K0 151 aa3.49□□□□□ -1.85
CASP4-213ENST00000534356 ZNF283Q8N7M2 679 aa3.49□□□□□ -1.85
CASP4-213ENST00000534356 OR4D11Q8NGI4 311 aa3.49□□□□□ -1.85
CASP4-213ENST00000534356 C15orf40Q8WUR7 153 aa3.49□□□□□ -1.85
CASP4-213ENST00000534356 C10orf82Q8WW14 230 aa3.49□□□□□ -1.85
CASP4-213ENST00000534356 CMBLQ96DG6 245 aa3.49□□□□□ -1.85
CASP4-213ENST00000534356 LINC00477Q96M19 166 aa3.49□□□□□ -1.85
CASP4-213ENST00000534356 OR5B12Q96R08 314 aa3.49□□□□□ -1.85
CASP4-213ENST00000534356 RTBDNQ9BSG5 229 aaPredicted RBP3.49□□□□□ -1.85
CASP4-213ENST00000534356 TUBG2Q9NRH3 451 aa3.49□□□□□ -1.85
CASP4-213ENST00000534356 OR5V1Q9UGF6 321 aa3.49□□□□□ -1.85
CASP4-213ENST00000534356 STAB2Q8WWQ8 2551 aa3.49□□□□□ -1.85
CASP4-213ENST00000534356 TRAV36DV7A0A075B6V5 113 aa3.48□□□□□ -1.85
CASP4-213ENST00000534356 C5orf63A6NC05 138 aa3.48□□□□□ -1.85
CASP4-213ENST00000534356 F5H5P2 479 aa3.48□□□□□ -1.85
CASP4-213ENST00000534356 KPNA4O00629 521 aaPredicted RBP3.48□□□□□ -1.85
CASP4-213ENST00000534356 COPEO14579 308 aa3.48□□□□□ -1.85
CASP4-213ENST00000534356 AKR7A2O43488 359 aa3.48□□□□□ -1.85
CASP4-213ENST00000534356 PGA4P0DJD7 388 aa3.48□□□□□ -1.85
CASP4-213ENST00000534356 PGA3P0DJD8 388 aa3.48□□□□□ -1.85
CASP4-213ENST00000534356 GTF2E2P29084 291 aaKnown RBP3.48□□□□□ -1.85
CASP4-213ENST00000534356 S100A3P33764 101 aa3.48□□□□□ -1.85
CASP4-213ENST00000534356 CRATP43155 626 aa3.48□□□□□ -1.85
CASP4-213ENST00000534356 COPZ1P61923 177 aa3.48□□□□□ -1.85
CASP4-213ENST00000534356 RPS23P62266 143 aaKnown RBP3.48□□□□□ -1.85
CASP4-213ENST00000534356 ARF6P62330 175 aa3.48□□□□□ -1.85
CASP4-213ENST00000534356 ADARB1P78563 741 aaKnown RBP3.48□□□□□ -1.85
CASP4-213ENST00000534356 HPCAP84074 193 aa3.48□□□□□ -1.85
CASP4-213ENST00000534356 KLRD1Q13241 179 aa3.48□□□□□ -1.85
CASP4-213ENST00000534356 OR1Q1Q15612 314 aa3.48□□□□□ -1.85
CASP4-213ENST00000534356 MRPL23Q16540 153 aaKnown RBP3.48□□□□□ -1.85
CASP4-213ENST00000534356 TBC1D28Q2M2D7 210 aa3.48□□□□□ -1.85
CASP4-213ENST00000534356 TMEM155Q4W5P6 130 aa3.48□□□□□ -1.85
CASP4-213ENST00000534356 METTL21CQ5VZV1 264 aa3.48□□□□□ -1.85
CASP4-213ENST00000534356 LRRN1Q6UXK5 716 aa3.48□□□□□ -1.85
CASP4-213ENST00000534356 LGI3Q8N145 548 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms