RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 SIGLEC5O15389 551 aa4.69□□□□□ -1.66
CHKA-208ENST00000533910 JTBO76095 146 aa4.69□□□□□ -1.66
CHKA-208ENST00000533910 SIX6O95475 246 aa4.69□□□□□ -1.66
CHKA-208ENST00000533910 IFNA2P01563 188 aa4.69□□□□□ -1.66
CHKA-208ENST00000533910 HEXAP06865 529 aa4.69□□□□□ -1.66
CHKA-208ENST00000533910 CGB3P0DN86 165 aa4.69□□□□□ -1.66
CHKA-208ENST00000533910 CGB7P0DN87 165 aa4.69□□□□□ -1.66
CHKA-208ENST00000533910 IRF2P14316 349 aa4.69□□□□□ -1.66
CHKA-208ENST00000533910 CTRB1P17538 263 aa4.69□□□□□ -1.66
CHKA-208ENST00000533910 DNASE1P24855 282 aa4.69□□□□□ -1.66
CHKA-208ENST00000533910 GNRHRP30968 328 aa4.69□□□□□ -1.66
CHKA-208ENST00000533910 GABRA2P47869 451 aa4.69□□□□□ -1.66
CHKA-208ENST00000533910 GLIPR1P48060 266 aa4.69□□□□□ -1.66
CHKA-208ENST00000533910 SRPXP78539 464 aa4.69□□□□□ -1.66
CHKA-208ENST00000533910 AESQ08117 197 aa4.69□□□□□ -1.66
CHKA-208ENST00000533910 TMEM187Q14656 261 aa4.69□□□□□ -1.66
CHKA-208ENST00000533910 SLC9A3R2Q15599 337 aa4.69□□□□□ -1.66
CHKA-208ENST00000533910 MSMO1Q15800 293 aa4.69□□□□□ -1.66
CHKA-208ENST00000533910 ABCA11PQ4W5N1 156 aa4.69□□□□□ -1.66
CHKA-208ENST00000533910 Q5BKY6 102 aa4.69□□□□□ -1.66
CHKA-208ENST00000533910 FAM201AQ5SY85 155 aa4.69□□□□□ -1.66
CHKA-208ENST00000533910 CTRB2Q6GPI1 263 aa4.69□□□□□ -1.66
CHKA-208ENST00000533910 LAMTOR1Q6IAA8 161 aa4.69□□□□□ -1.66
CHKA-208ENST00000533910 C11orf71Q6IPW1 123 aa4.69□□□□□ -1.66
CHKA-208ENST00000533910 KRTAP5-3Q6L8H2 238 aa4.69□□□□□ -1.66
CHKA-208ENST00000533910 ZNF818PQ6ZRF7 136 aa4.69□□□□□ -1.66
CHKA-208ENST00000533910 CENPVQ7Z7K6 275 aaPredicted RBP4.69□□□□□ -1.66
CHKA-208ENST00000533910 TGIF2LYQ8IUE0 185 aa4.69□□□□□ -1.66
CHKA-208ENST00000533910 SGPP2Q8IWX5 399 aa4.69□□□□□ -1.66
CHKA-208ENST00000533910 ZCCHC24Q8N2G6 241 aaKnown RBP4.69□□□□□ -1.66
CHKA-208ENST00000533910 MUC15Q8N387 334 aa4.69□□□□□ -1.66
CHKA-208ENST00000533910 BOLLQ8N9W6 283 aaKnown RBP4.69□□□□□ -1.66
CHKA-208ENST00000533910 OR5T2Q8NGG2 359 aa4.69□□□□□ -1.66
CHKA-208ENST00000533910 OR13A1Q8NGR1 328 aa4.69□□□□□ -1.66
CHKA-208ENST00000533910 OR1L1Q8NH94 360 aa4.69□□□□□ -1.66
CHKA-208ENST00000533910 RTN4IP1Q8WWV3 396 aaPredicted RBP4.69□□□□□ -1.66
CHKA-208ENST00000533910 SUCNR1Q9BXA5 334 aa4.69□□□□□ -1.66
CHKA-208ENST00000533910 GON7Q9BXV9 100 aa4.69□□□□□ -1.66
CHKA-208ENST00000533910 CHIAQ9BZP6 476 aa4.69□□□□□ -1.66
CHKA-208ENST00000533910 ZNF665Q9H7R5 613 aa4.69□□□□□ -1.66
CHKA-208ENST00000533910 TMEM106BQ9NUM4 274 aa4.69□□□□□ -1.66
CHKA-208ENST00000533910 KCNIP1Q9NZI2 227 aa4.69□□□□□ -1.66
CHKA-208ENST00000533910 OR6C3Q9NZP0 311 aa4.69□□□□□ -1.66
CHKA-208ENST00000533910 OR1A1Q9P1Q5 309 aa4.69□□□□□ -1.66
CHKA-208ENST00000533910 PAIP2BQ9ULR5 123 aaKnown RBP4.69□□□□□ -1.66
CHKA-208ENST00000533910 PUS1Q9Y606 427 aaKnown RBP eCLIP4.69□□□□□ -1.66
CHKA-208ENST00000533910 USP9XQ93008 2570 aaPredicted RBP4.69□□□□□ -1.66
CHKA-208ENST00000533910 FLNCQ14315 2725 aa4.69□□□□□ -1.66
CHKA-208ENST00000533910 IGHV1-69-2A0A0G2JMI3 117 aa4.68□□□□□ -1.66
CHKA-208ENST00000533910 TEX13DA0A0J9YY54 714 aaPredicted RBP4.68□□□□□ -1.66
CHKA-208ENST00000533910 A0A1B0GW55 424 aa4.68□□□□□ -1.66
CHKA-208ENST00000533910 HMSDA8MTL9 139 aa4.68□□□□□ -1.66
CHKA-208ENST00000533910 H0Y980 276 aa4.68□□□□□ -1.66
CHKA-208ENST00000533910 C19orf84I3L1E1 186 aa4.68□□□□□ -1.66
CHKA-208ENST00000533910 CCSO14618 274 aa4.68□□□□□ -1.66
CHKA-208ENST00000533910 RP2O75695 350 aa4.68□□□□□ -1.66
CHKA-208ENST00000533910 SNAPC5O75971 98 aa4.68□□□□□ -1.66
CHKA-208ENST00000533910 IGLV2-14P01704 120 aa4.68□□□□□ -1.66
CHKA-208ENST00000533910 HBZP02008 142 aa4.68□□□□□ -1.66
CHKA-208ENST00000533910 HOXB5P09067 269 aa4.68□□□□□ -1.66
CHKA-208ENST00000533910 OR5AC1P0C628 307 aa4.68□□□□□ -1.66
CHKA-208ENST00000533910 DANCRP0C864 163 aa4.68□□□□□ -1.66
CHKA-208ENST00000533910 DUX4L2P0CJ85 424 aa4.68□□□□□ -1.66
CHKA-208ENST00000533910 DUX4L3P0CJ86 424 aa4.68□□□□□ -1.66
CHKA-208ENST00000533910 DUX4L4P0CJ87 422 aa4.68□□□□□ -1.66
CHKA-208ENST00000533910 DUX4L5P0CJ88 424 aa4.68□□□□□ -1.66
CHKA-208ENST00000533910 DUX4L6P0CJ89 424 aa4.68□□□□□ -1.66
CHKA-208ENST00000533910 DUX4L7P0CJ90 424 aa4.68□□□□□ -1.66
CHKA-208ENST00000533910 UCP1P25874 307 aa4.68□□□□□ -1.66
CHKA-208ENST00000533910 SSTR5P35346 364 aa4.68□□□□□ -1.66
CHKA-208ENST00000533910 MRPS11P82912 194 aaKnown RBP4.68□□□□□ -1.66
CHKA-208ENST00000533910 IFITM2Q01629 132 aa4.68□□□□□ -1.66
CHKA-208ENST00000533910 IL15RAQ13261 267 aa4.68□□□□□ -1.66
CHKA-208ENST00000533910 EIF4EBP1Q13541 118 aaPredicted RBP4.68□□□□□ -1.66
CHKA-208ENST00000533910 EDDM3AQ14507 147 aa4.68□□□□□ -1.66
CHKA-208ENST00000533910 TMEM30BQ3MIR4 351 aa4.68□□□□□ -1.66
CHKA-208ENST00000533910 PHLDA2Q53GA4 152 aa4.68□□□□□ -1.66
CHKA-208ENST00000533910 PDLIM3Q53GG5 364 aaPredicted RBP4.68□□□□□ -1.66
CHKA-208ENST00000533910 NCR3LG1Q68D85 454 aa4.68□□□□□ -1.66
CHKA-208ENST00000533910 HIST2H2BCQ6DN03 193 aa4.68□□□□□ -1.66
CHKA-208ENST00000533910 HIST2H2BDQ6DRA6 164 aa4.68□□□□□ -1.66
CHKA-208ENST00000533910 DUX4L9Q6RFH8 374 aaPredicted RBP4.68□□□□□ -1.66
CHKA-208ENST00000533910 TCF23Q7RTU1 214 aa4.68□□□□□ -1.66
CHKA-208ENST00000533910 FAM216BQ8N7L0 139 aa4.68□□□□□ -1.66
CHKA-208ENST00000533910 TPRX1Q8N7U7 411 aa4.68□□□□□ -1.66
CHKA-208ENST00000533910 ZNRF1Q8ND25 227 aa4.68□□□□□ -1.66
CHKA-208ENST00000533910 OR10V1Q8NGI7 309 aa4.68□□□□□ -1.66
CHKA-208ENST00000533910 OR5D13Q8NGL4 314 aa4.68□□□□□ -1.66
CHKA-208ENST00000533910 LRRC20Q8TCA0 184 aa4.68□□□□□ -1.66
CHKA-208ENST00000533910 MRGPRDQ8TDS7 321 aa4.68□□□□□ -1.66
CHKA-208ENST00000533910 SECTM1Q8WVN6 248 aa4.68□□□□□ -1.66
CHKA-208ENST00000533910 IL1F10Q8WWZ1 152 aa4.68□□□□□ -1.66
CHKA-208ENST00000533910 RAB1CQ92928 201 aa4.68□□□□□ -1.66
CHKA-208ENST00000533910 GALMQ96C23 342 aa4.68□□□□□ -1.66
CHKA-208ENST00000533910 MSI2Q96DH6 328 aaKnown RBP4.68□□□□□ -1.66
CHKA-208ENST00000533910 AKR1E2Q96JD6 320 aa4.68□□□□□ -1.66
CHKA-208ENST00000533910 TMEM56Q96MV1 263 aa4.68□□□□□ -1.66
CHKA-208ENST00000533910 NMES1Q9C002 83 aa4.68□□□□□ -1.66
CHKA-208ENST00000533910 PARP12Q9H0J9 701 aaKnown RBP4.68□□□□□ -1.66
CHKA-208ENST00000533910 TMEM222Q9H0R3 208 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms