RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 RBFOX2O43251 390 aaKnown RBP eCLIP9.53□□□□□ -0.88
COMMD9-208ENST00000533643 CRYZL1O95825 349 aa9.53□□□□□ -0.88
COMMD9-208ENST00000533643 PTTG1O95997 202 aa9.53□□□□□ -0.88
COMMD9-208ENST00000533643 VSIG10L2P0DP72 767 aa9.53□□□□□ -0.88
COMMD9-208ENST00000533643 ANXA7P20073 488 aaKnown RBP9.53□□□□□ -0.88
COMMD9-208ENST00000533643 KIR2DS2P43631 304 aa9.53□□□□□ -0.88
COMMD9-208ENST00000533643 TAS2R31P59538 309 aa9.53□□□□□ -0.88
COMMD9-208ENST00000533643 SUPT4H1P63272 117 aaKnown RBP9.53□□□□□ -0.88
COMMD9-208ENST00000533643 DHODHQ02127 395 aa9.53□□□□□ -0.88
COMMD9-208ENST00000533643 SLC9A3R2Q15599 337 aa9.53□□□□□ -0.88
COMMD9-208ENST00000533643 SP6Q3SY56 376 aa9.53□□□□□ -0.88
COMMD9-208ENST00000533643 ZNF585BQ52M93 769 aa9.53□□□□□ -0.88
COMMD9-208ENST00000533643 TMEM177Q53S58 311 aa9.53□□□□□ -0.88
COMMD9-208ENST00000533643 TMEM128Q5BJH2 165 aa9.53□□□□□ -0.88
COMMD9-208ENST00000533643 TMEM219Q86XT9 240 aa9.53□□□□□ -0.88
COMMD9-208ENST00000533643 PDPNQ86YL7 162 aa9.53□□□□□ -0.88
COMMD9-208ENST00000533643 SGPP2Q8IWX5 399 aa9.53□□□□□ -0.88
COMMD9-208ENST00000533643 TMEM86BQ8N661 226 aa9.53□□□□□ -0.88
COMMD9-208ENST00000533643 TCTEX1D1Q8N7M0 179 aa9.53□□□□□ -0.88
COMMD9-208ENST00000533643 OR2T10Q8NGZ9 312 aa9.53□□□□□ -0.88
COMMD9-208ENST00000533643 DUX5Q96PT3 197 aa9.53□□□□□ -0.88
COMMD9-208ENST00000533643 TP53RKQ96S44 253 aa9.53□□□□□ -0.88
COMMD9-208ENST00000533643 TNFRSF19Q9NS68 423 aa9.53□□□□□ -0.88
COMMD9-208ENST00000533643 TCF19Q9Y242 345 aa9.53□□□□□ -0.88
COMMD9-208ENST00000533643 POMT1Q9Y6A1 747 aa9.53□□□□□ -0.88
COMMD9-208ENST00000533643 NF1P21359 2839 aa9.53□□□□□ -0.88
COMMD9-208ENST00000533643 BTBD17A6NE02 478 aa9.52□□□□□ -0.89
COMMD9-208ENST00000533643 DNAJC9-AS1A6NH13 148 aa9.52□□□□□ -0.89
COMMD9-208ENST00000533643 H0Y980 276 aa9.52□□□□□ -0.89
COMMD9-208ENST00000533643 TMEM11P17152 192 aa9.52□□□□□ -0.89
COMMD9-208ENST00000533643 CNTFRP26992 372 aa9.52□□□□□ -0.89
COMMD9-208ENST00000533643 LPAR6P43657 344 aa9.52□□□□□ -0.89
COMMD9-208ENST00000533643 F2RL1P55085 397 aa9.52□□□□□ -0.89
COMMD9-208ENST00000533643 RAB25P57735 213 aa9.52□□□□□ -0.89
COMMD9-208ENST00000533643 HILS1P60008 231 aa9.52□□□□□ -0.89
COMMD9-208ENST00000533643 UBE2MP61081 183 aaKnown RBP9.52□□□□□ -0.89
COMMD9-208ENST00000533643 RPS16P62249 146 aaKnown RBP9.52□□□□□ -0.89
COMMD9-208ENST00000533643 DHRS7BQ6IAN0 325 aaPredicted RBP9.52□□□□□ -0.89
COMMD9-208ENST00000533643 OR4C13Q8NGP0 309 aa9.52□□□□□ -0.89
COMMD9-208ENST00000533643 OR4S2Q8NH73 311 aa9.52□□□□□ -0.89
COMMD9-208ENST00000533643 CD300LFQ8TDQ1 290 aa9.52□□□□□ -0.89
COMMD9-208ENST00000533643 ZFAND2BQ8WV99 257 aa9.52□□□□□ -0.89
COMMD9-208ENST00000533643 FLYWCH2Q96CP2 140 aaKnown RBP9.52□□□□□ -0.89
COMMD9-208ENST00000533643 GALNT14Q96FL9 552 aa9.52□□□□□ -0.89
COMMD9-208ENST00000533643 RNF5Q99942 180 aa9.52□□□□□ -0.89
COMMD9-208ENST00000533643 BEX1Q9HBH7 125 aa9.52□□□□□ -0.89
COMMD9-208ENST00000533643 PLSCR3Q9NRY6 295 aa9.52□□□□□ -0.89
COMMD9-208ENST00000533643 FAM212BQ9NTI7 297 aaPredicted RBP9.52□□□□□ -0.89
COMMD9-208ENST00000533643 VPREB3Q9UKI3 123 aa9.52□□□□□ -0.89
COMMD9-208ENST00000533643 SRRM4A7MD48 611 aaKnown RBP9.51□□□□□ -0.89
COMMD9-208ENST00000533643 CLDN34H7C241 214 aa9.51□□□□□ -0.89
COMMD9-208ENST00000533643 CHST1O43916 411 aa9.51□□□□□ -0.89
COMMD9-208ENST00000533643 PEX14O75381 377 aa9.51□□□□□ -0.89
COMMD9-208ENST00000533643 B3GALNT1O75752 331 aa9.51□□□□□ -0.89
COMMD9-208ENST00000533643 IFNA2P01563 188 aa9.51□□□□□ -0.89
COMMD9-208ENST00000533643 IGKV1-39P01597 117 aa9.51□□□□□ -0.89
COMMD9-208ENST00000533643 IGLV2-23P01705 113 aa9.51□□□□□ -0.89
COMMD9-208ENST00000533643 IGKV1D-39P04432 117 aa9.51□□□□□ -0.89
COMMD9-208ENST00000533643 OR5AC1P0C628 307 aa9.51□□□□□ -0.89
COMMD9-208ENST00000533643 OR4E1P0C645 316 aa9.51□□□□□ -0.89
COMMD9-208ENST00000533643 UCP1P25874 307 aa9.51□□□□□ -0.89
COMMD9-208ENST00000533643 MECP2P51608 486 aaKnown RBP9.51□□□□□ -0.89
COMMD9-208ENST00000533643 CBX3Q13185 183 aa9.51□□□□□ -0.89
COMMD9-208ENST00000533643 PPP1R1AQ13522 171 aa9.51□□□□□ -0.89
COMMD9-208ENST00000533643 TMEM187Q14656 261 aa9.51□□□□□ -0.89
COMMD9-208ENST00000533643 RGS21Q2M5E4 152 aa9.51□□□□□ -0.89
COMMD9-208ENST00000533643 PLET1Q6UQ28 207 aa9.51□□□□□ -0.89
COMMD9-208ENST00000533643 OSR1Q8TAX0 266 aaPredicted RBP9.51□□□□□ -0.89
COMMD9-208ENST00000533643 GLYATL2Q8WU03 294 aa9.51□□□□□ -0.89
COMMD9-208ENST00000533643 RBM14Q96PK6 669 aaKnown RBP9.51□□□□□ -0.89
COMMD9-208ENST00000533643 MARVELD1Q9BSK0 173 aa9.51□□□□□ -0.89
COMMD9-208ENST00000533643 CHIAQ9BZP6 476 aa9.51□□□□□ -0.89
COMMD9-208ENST00000533643 TMEM222Q9H0R3 208 aa9.51□□□□□ -0.89
COMMD9-208ENST00000533643 ALX4Q9H161 411 aaPredicted RBP9.51□□□□□ -0.89
COMMD9-208ENST00000533643 PLEKHA2Q9HB19 425 aa9.51□□□□□ -0.89
COMMD9-208ENST00000533643 PITPNC1Q9UKF7 332 aa9.51□□□□□ -0.89
COMMD9-208ENST00000533643 KCNIP3Q9Y2W7 256 aa9.51□□□□□ -0.89
COMMD9-208ENST00000533643 SETD2Q9BYW2 2564 aaPredicted RBP9.5□□□□□ -0.89
COMMD9-208ENST00000533643 CUBNO60494 3623 aa9.5□□□□□ -0.89
COMMD9-208ENST00000533643 A0A0A6YYJ9 748 aa9.5□□□□□ -0.89
COMMD9-208ENST00000533643 INMT-MINDY4F8WBC2 141 aa9.5□□□□□ -0.89
COMMD9-208ENST00000533643 SHOXO15266 292 aa9.5□□□□□ -0.89
COMMD9-208ENST00000533643 OR2F2O95006 317 aa9.5□□□□□ -0.89
COMMD9-208ENST00000533643 S1PR2O95136 353 aa9.5□□□□□ -0.89
COMMD9-208ENST00000533643 SFT2D2O95562 160 aa9.5□□□□□ -0.89
COMMD9-208ENST00000533643 HPRT1P00492 218 aa9.5□□□□□ -0.89
COMMD9-208ENST00000533643 SERPINE2P07093 398 aa9.5□□□□□ -0.89
COMMD9-208ENST00000533643 VAMP1P23763 118 aa9.5□□□□□ -0.89
COMMD9-208ENST00000533643 LGALS7P47929 136 aa9.5□□□□□ -0.89
COMMD9-208ENST00000533643 RAG2P55895 527 aa9.5□□□□□ -0.89
COMMD9-208ENST00000533643 DHRS2Q13268 280 aa9.5□□□□□ -0.89
COMMD9-208ENST00000533643 PSG5Q15238 335 aa9.5□□□□□ -0.89
COMMD9-208ENST00000533643 C11orf88Q6PI97 169 aa9.5□□□□□ -0.89
COMMD9-208ENST00000533643 NPBQ8NG41 125 aa9.5□□□□□ -0.89
COMMD9-208ENST00000533643 HARBI1Q96MB7 349 aa9.5□□□□□ -0.89
COMMD9-208ENST00000533643 TSNAXQ99598 290 aaKnown RBP9.5□□□□□ -0.89
COMMD9-208ENST00000533643 SLC25A33Q9BSK2 321 aa9.5□□□□□ -0.89
COMMD9-208ENST00000533643 PRR13Q9NZ81 148 aa9.5□□□□□ -0.89
COMMD9-208ENST00000533643 C9orf170A2RU37 121 aa9.49□□□□□ -0.89
COMMD9-208ENST00000533643 NCBP2LA6PVI3 153 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms