RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 TEX48A0A1B0GUV7 120 aa4.59□□□□□ -1.67
CD44-236ENST00000533222 A0A1W2PPM0 123 aa4.59□□□□□ -1.67
CD44-236ENST00000533222 DPRXA6NFQ7 191 aa4.59□□□□□ -1.67
CD44-236ENST00000533222 SHISA7A6NL88 538 aa4.59□□□□□ -1.67
CD44-236ENST00000533222 J3QRE1 110 aa4.59□□□□□ -1.67
CD44-236ENST00000533222 KLK10O43240 276 aa4.59□□□□□ -1.67
CD44-236ENST00000533222 SPRY1O43609 319 aaPredicted RBP4.59□□□□□ -1.67
CD44-236ENST00000533222 STK17BO94768 372 aa4.59□□□□□ -1.67
CD44-236ENST00000533222 IGHG1P01857 330 aa4.59□□□□□ -1.67
CD44-236ENST00000533222 ATP5G1P05496 136 aa4.59□□□□□ -1.67
CD44-236ENST00000533222 KLK1P06870 262 aa4.59□□□□□ -1.67
CD44-236ENST00000533222 RPS12P25398 132 aaKnown RBP4.59□□□□□ -1.67
CD44-236ENST00000533222 HRH1P35367 487 aa4.59□□□□□ -1.67
CD44-236ENST00000533222 OPRM1P35372 400 aa4.59□□□□□ -1.67
CD44-236ENST00000533222 ATP5G3P48201 142 aa4.59□□□□□ -1.67
CD44-236ENST00000533222 RHOAP61586 193 aa4.59□□□□□ -1.67
CD44-236ENST00000533222 MRPS6P82932 125 aaKnown RBP4.59□□□□□ -1.67
CD44-236ENST00000533222 ATP5G2Q06055 141 aa4.59□□□□□ -1.67
CD44-236ENST00000533222 IHHQ14623 411 aa4.59□□□□□ -1.67
CD44-236ENST00000533222 MIA3Q5JRA6 1907 aa4.59□□□□□ -1.67
CD44-236ENST00000533222 CXorf66Q5JRM2 361 aaPredicted RBP4.59□□□□□ -1.67
CD44-236ENST00000533222 CLEC12AQ5QGZ9 265 aa4.59□□□□□ -1.67
CD44-236ENST00000533222 Q6AWC8 147 aa4.59□□□□□ -1.67
CD44-236ENST00000533222 ASPHD2Q6ICH7 369 aa4.59□□□□□ -1.67
CD44-236ENST00000533222 ZNF474Q6S9Z5 364 aaPredicted RBP4.59□□□□□ -1.67
CD44-236ENST00000533222 IL17RELQ6ZVW7 336 aa4.59□□□□□ -1.67
CD44-236ENST00000533222 FAM19A5Q7Z5A7 132 aaPredicted RBP4.59□□□□□ -1.67
CD44-236ENST00000533222 MSRB3Q8IXL7 192 aa4.59□□□□□ -1.67
CD44-236ENST00000533222 SAXO1Q8IYX7 474 aa4.59□□□□□ -1.67
CD44-236ENST00000533222 SCCPDHQ8NBX0 429 aa4.59□□□□□ -1.67
CD44-236ENST00000533222 TMEM116Q8NCL8 245 aa4.59□□□□□ -1.67
CD44-236ENST00000533222 OR11H6Q8NGC7 330 aa4.59□□□□□ -1.67
CD44-236ENST00000533222 OR4A16Q8NH70 328 aa4.59□□□□□ -1.67
CD44-236ENST00000533222 OR4A5Q8NH83 315 aa4.59□□□□□ -1.67
CD44-236ENST00000533222 ZNRF4Q8WWF5 429 aa4.59□□□□□ -1.67
CD44-236ENST00000533222 IGFBPL1Q8WX77 278 aa4.59□□□□□ -1.67
CD44-236ENST00000533222 OR5P2Q8WZ92 322 aa4.59□□□□□ -1.67
CD44-236ENST00000533222 OR5P3Q8WZ94 311 aa4.59□□□□□ -1.67
CD44-236ENST00000533222 RPEQ96AT9 228 aa4.59□□□□□ -1.67
CD44-236ENST00000533222 TMEM70Q9BUB7 260 aa4.59□□□□□ -1.67
CD44-236ENST00000533222 MCRIP2Q9BUT9 160 aaKnown RBP4.59□□□□□ -1.67
CD44-236ENST00000533222 TM2D2Q9BX73 214 aa4.59□□□□□ -1.67
CD44-236ENST00000533222 HCAR1Q9BXC0 346 aa4.59□□□□□ -1.67
CD44-236ENST00000533222 SMIM3Q9BZL3 60 aa4.59□□□□□ -1.67
CD44-236ENST00000533222 CHST6Q9GZX3 395 aa4.59□□□□□ -1.67
CD44-236ENST00000533222 SIRPDQ9H106 197 aa4.59□□□□□ -1.67
CD44-236ENST00000533222 CALHM2Q9HA72 323 aa4.59□□□□□ -1.67
CD44-236ENST00000533222 SH2D2AQ9NP31 389 aa4.59□□□□□ -1.67
CD44-236ENST00000533222 ENY2Q9NPA8 101 aa4.59□□□□□ -1.67
CD44-236ENST00000533222 PNRC2Q9NPJ4 139 aaKnown RBP4.59□□□□□ -1.67
CD44-236ENST00000533222 TMEM30AQ9NV96 361 aa4.59□□□□□ -1.67
CD44-236ENST00000533222 SLC25A37Q9NYZ2 338 aa4.59□□□□□ -1.67
CD44-236ENST00000533222 CD207Q9UJ71 328 aa4.59□□□□□ -1.67
CD44-236ENST00000533222 B9D1Q9UPM9 204 aa4.59□□□□□ -1.67
CD44-236ENST00000533222 ZNF257Q9Y2Q1 563 aa4.59□□□□□ -1.67
CD44-236ENST00000533222 NCKAP5O14513 1909 aa4.58□□□□□ -1.68
CD44-236ENST00000533222 A0A0B4J2E0 115 aa4.58□□□□□ -1.68
CD44-236ENST00000533222 SPAARA0A1B0GVQ0 90 aa4.58□□□□□ -1.68
CD44-236ENST00000533222 A0A1B0GX12 115 aa4.58□□□□□ -1.68
CD44-236ENST00000533222 A0A1W2PPI3 338 aa4.58□□□□□ -1.68
CD44-236ENST00000533222 ODAMA1E959 279 aa4.58□□□□□ -1.68
CD44-236ENST00000533222 PRSS37A4D1T9 235 aa4.58□□□□□ -1.68
CD44-236ENST00000533222 NPIPB5A8MRT5 1133 aa4.58□□□□□ -1.68
CD44-236ENST00000533222 ZNF727A8MUV8 499 aa4.58□□□□□ -1.68
CD44-236ENST00000533222 FNDC10F2Z333 226 aa4.58□□□□□ -1.68
CD44-236ENST00000533222 F5H5K5 113 aa4.58□□□□□ -1.68
CD44-236ENST00000533222 KRASP01116 189 aa4.58□□□□□ -1.68
CD44-236ENST00000533222 SP1P08047 785 aa4.58□□□□□ -1.68
CD44-236ENST00000533222 FABP2P12104 132 aa4.58□□□□□ -1.68
CD44-236ENST00000533222 ZNF43P17038 809 aa4.58□□□□□ -1.68
CD44-236ENST00000533222 CD38P28907 300 aa4.58□□□□□ -1.68
CD44-236ENST00000533222 KIR2DS2P43631 304 aa4.58□□□□□ -1.68
CD44-236ENST00000533222 GPR1P46091 355 aa4.58□□□□□ -1.68
CD44-236ENST00000533222 OR1E2P47887 323 aa4.58□□□□□ -1.68
CD44-236ENST00000533222 NDUFV3P56181 108 aaKnown RBP4.58□□□□□ -1.68
CD44-236ENST00000533222 CAV3P56539 151 aa4.58□□□□□ -1.68
CD44-236ENST00000533222 ZNF146Q15072 292 aa4.58□□□□□ -1.68
CD44-236ENST00000533222 IGFBP7Q16270 282 aa4.58□□□□□ -1.68
CD44-236ENST00000533222 SLC25A35Q3KQZ1 300 aa4.58□□□□□ -1.68
CD44-236ENST00000533222 ENTPD8Q5MY95 495 aa4.58□□□□□ -1.68
CD44-236ENST00000533222 C1orf220Q5T0J3 134 aa4.58□□□□□ -1.68
CD44-236ENST00000533222 TXNRD3NBQ6F5E7 133 aa4.58□□□□□ -1.68
CD44-236ENST00000533222 ZNF880Q6PDB4 577 aa4.58□□□□□ -1.68
CD44-236ENST00000533222 MORN3Q6PF18 240 aaPredicted RBP4.58□□□□□ -1.68
CD44-236ENST00000533222 SLC25A34Q6PIV7 304 aa4.58□□□□□ -1.68
CD44-236ENST00000533222 CEACAM20Q6UY09 585 aa4.58□□□□□ -1.68
CD44-236ENST00000533222 Q6ZUT4 128 aa4.58□□□□□ -1.68
CD44-236ENST00000533222 RBMXL3Q8N7X1 1067 aaKnown RBP4.58□□□□□ -1.68
CD44-236ENST00000533222 OR1L4Q8NGR5 311 aa4.58□□□□□ -1.68
CD44-236ENST00000533222 OR10AG1Q8NH19 301 aa4.58□□□□□ -1.68
CD44-236ENST00000533222 OR10D3Q8NH80 312 aa4.58□□□□□ -1.68
CD44-236ENST00000533222 SGMS2Q8NHU3 365 aa4.58□□□□□ -1.68
CD44-236ENST00000533222 OSR1Q8TAX0 266 aaPredicted RBP4.58□□□□□ -1.68
CD44-236ENST00000533222 MRPL30Q8TCC3 161 aaKnown RBP4.58□□□□□ -1.68
CD44-236ENST00000533222 RNF138Q8WVD3 245 aa4.58□□□□□ -1.68
CD44-236ENST00000533222 C10orf35Q96D05 121 aa4.58□□□□□ -1.68
CD44-236ENST00000533222 C2orf50Q96LR7 162 aa4.58□□□□□ -1.68
CD44-236ENST00000533222 MYADMQ96S97 322 aa4.58□□□□□ -1.68
CD44-236ENST00000533222 VGLL1Q99990 258 aa4.58□□□□□ -1.68
CD44-236ENST00000533222 TM2D1Q9BX74 207 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms