RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 GFOD1Q9NXC2 390 aa9.02□□□□□ -0.97
TRAPPC4-213ENST00000533149 ZNF221Q9UK13 617 aa9.02□□□□□ -0.97
TRAPPC4-213ENST00000533149 JPT1Q9UK76 154 aa9.02□□□□□ -0.97
TRAPPC4-213ENST00000533149 RNF150Q9ULK6 438 aa9.02□□□□□ -0.97
TRAPPC4-213ENST00000533149 C14orf166Q9Y224 244 aaKnown RBP9.02□□□□□ -0.97
TRAPPC4-213ENST00000533149 RBM7Q9Y580 266 aaKnown RBP9.02□□□□□ -0.97
TRAPPC4-213ENST00000533149 TSSC4Q9Y5U2 329 aaPredicted RBP9.02□□□□□ -0.97
TRAPPC4-213ENST00000533149 A0A1W2PPH5 198 aa9.01□□□□□ -0.97
TRAPPC4-213ENST00000533149 TCRBV4S1A1TA0A5B7 111 aa9.01□□□□□ -0.97
TRAPPC4-213ENST00000533149 C17orf98A8MV24 154 aa9.01□□□□□ -0.97
TRAPPC4-213ENST00000533149 RGS11O94810 467 aa9.01□□□□□ -0.97
TRAPPC4-213ENST00000533149 IGHV3-7P01780 117 aa9.01□□□□□ -0.97
TRAPPC4-213ENST00000533149 OR4E1P0C645 316 aa9.01□□□□□ -0.97
TRAPPC4-213ENST00000533149 AKR1C4P17516 323 aa9.01□□□□□ -0.97
TRAPPC4-213ENST00000533149 GNRHRP30968 328 aa9.01□□□□□ -0.97
TRAPPC4-213ENST00000533149 BCAP31P51572 246 aa9.01□□□□□ -0.97
TRAPPC4-213ENST00000533149 TAS2R31P59538 309 aa9.01□□□□□ -0.97
TRAPPC4-213ENST00000533149 TMEM30BQ3MIR4 351 aa9.01□□□□□ -0.97
TRAPPC4-213ENST00000533149 ABCA11PQ4W5N1 156 aa9.01□□□□□ -0.97
TRAPPC4-213ENST00000533149 C4orf46Q504U0 113 aa9.01□□□□□ -0.97
TRAPPC4-213ENST00000533149 KIAA2026Q5HYC2 2103 aa9.01□□□□□ -0.97
TRAPPC4-213ENST00000533149 LY6G6FQ5SQ64 297 aa9.01□□□□□ -0.97
TRAPPC4-213ENST00000533149 UTF1Q5T230 341 aa9.01□□□□□ -0.97
TRAPPC4-213ENST00000533149 C11orf42Q8N5U0 333 aa9.01□□□□□ -0.97
TRAPPC4-213ENST00000533149 CAPSLQ8WWF8 208 aa9.01□□□□□ -0.97
TRAPPC4-213ENST00000533149 TMEM230Q96A57 120 aa9.01□□□□□ -0.97
TRAPPC4-213ENST00000533149 AJUBAQ96IF1 538 aa9.01□□□□□ -0.97
TRAPPC4-213ENST00000533149 OR51J1Q9H342 316 aa9.01□□□□□ -0.97
TRAPPC4-213ENST00000533149 GHITMQ9H3K2 345 aa9.01□□□□□ -0.97
TRAPPC4-213ENST00000533149 GPN1Q9HCN4 374 aaPredicted RBP9.01□□□□□ -0.97
TRAPPC4-213ENST00000533149 C7orf66A4D0T2 115 aa9□□□□□ -0.97
TRAPPC4-213ENST00000533149 HSD17B6O14756 317 aa9□□□□□ -0.97
TRAPPC4-213ENST00000533149 RAMP3O60896 148 aa9□□□□□ -0.97
TRAPPC4-213ENST00000533149 VDAC2P45880 294 aaPredicted RBP9□□□□□ -0.97
TRAPPC4-213ENST00000533149 DHODHQ02127 395 aa9□□□□□ -0.97
TRAPPC4-213ENST00000533149 PHLDA2Q53GA4 152 aa9□□□□□ -0.97
TRAPPC4-213ENST00000533149 CT45A1Q5HYN5 189 aa9□□□□□ -0.97
TRAPPC4-213ENST00000533149 ZNF818PQ6ZRF7 136 aa9□□□□□ -0.97
TRAPPC4-213ENST00000533149 LINC00482Q8N8I6 264 aa9□□□□□ -0.97
TRAPPC4-213ENST00000533149 OR52B4Q8NGK2 314 aa9□□□□□ -0.97
TRAPPC4-213ENST00000533149 CT45A3Q8NHU0 189 aa9□□□□□ -0.97
TRAPPC4-213ENST00000533149 PIFOQ8TCI5 191 aa9□□□□□ -0.97
TRAPPC4-213ENST00000533149 LEAP2Q969E1 77 aa9□□□□□ -0.97
TRAPPC4-213ENST00000533149 PSG11Q9UQ72 335 aa9□□□□□ -0.97
TRAPPC4-213ENST00000533149 TEX13DA0A0J9YY54 714 aaPredicted RBP8.99□□□□□ -0.97
TRAPPC4-213ENST00000533149 A0A1W2PPE3 182 aa8.99□□□□□ -0.97
TRAPPC4-213ENST00000533149 C9orf170A2RU37 121 aa8.99□□□□□ -0.97
TRAPPC4-213ENST00000533149 SNRPGP15A8MWD9 76 aa8.99□□□□□ -0.97
TRAPPC4-213ENST00000533149 GPR31O00270 319 aa8.99□□□□□ -0.97
TRAPPC4-213ENST00000533149 ITGB1BP1O14713 200 aa8.99□□□□□ -0.97
TRAPPC4-213ENST00000533149 SLC31A2O15432 143 aa8.99□□□□□ -0.97
TRAPPC4-213ENST00000533149 ST8SIA5O15466 376 aa8.99□□□□□ -0.97
TRAPPC4-213ENST00000533149 PGLYRP1O75594 196 aaPredicted RBP8.99□□□□□ -0.97
TRAPPC4-213ENST00000533149 ZNF134P52741 427 aa8.99□□□□□ -0.97
TRAPPC4-213ENST00000533149 PIGPP57054 158 aa8.99□□□□□ -0.97
TRAPPC4-213ENST00000533149 UBE2MP61081 183 aaKnown RBP8.99□□□□□ -0.97
TRAPPC4-213ENST00000533149 CBX3Q13185 183 aa8.99□□□□□ -0.97
TRAPPC4-213ENST00000533149 PPP1R1AQ13522 171 aa8.99□□□□□ -0.97
TRAPPC4-213ENST00000533149 TMEM128Q5BJH2 165 aa8.99□□□□□ -0.97
TRAPPC4-213ENST00000533149 LYG2Q86SG7 212 aa8.99□□□□□ -0.97
TRAPPC4-213ENST00000533149 ZNF439Q8NDP4 499 aa8.99□□□□□ -0.97
TRAPPC4-213ENST00000533149 ZNF431Q8TF32 576 aaPredicted RBP8.99□□□□□ -0.97
TRAPPC4-213ENST00000533149 EDARADDQ8WWZ3 215 aa8.99□□□□□ -0.97
TRAPPC4-213ENST00000533149 ZNF486Q96H40 463 aaPredicted RBP8.99□□□□□ -0.97
TRAPPC4-213ENST00000533149 AKR1E2Q96JD6 320 aa8.99□□□□□ -0.97
TRAPPC4-213ENST00000533149 PITPNC1Q9UKF7 332 aa8.99□□□□□ -0.97
TRAPPC4-213ENST00000533149 LSM4Q9Y4Z0 139 aaKnown RBP8.99□□□□□ -0.97
TRAPPC4-213ENST00000533149 SESN1Q9Y6P5 492 aa8.99□□□□□ -0.97
TRAPPC4-213ENST00000533149 DYNC2H1Q8NCM8 4307 aaKnown RBP8.98□□□□□ -0.97
TRAPPC4-213ENST00000533149 HMX3A6NHT5 357 aa8.98□□□□□ -0.97
TRAPPC4-213ENST00000533149 CRYM-AS1A6NIL9 109 aa8.98□□□□□ -0.97
TRAPPC4-213ENST00000533149 MPPED1O15442 326 aa8.98□□□□□ -0.97
TRAPPC4-213ENST00000533149 SFT2D2O95562 160 aa8.98□□□□□ -0.97
TRAPPC4-213ENST00000533149 IGHV1-8P0DP01 117 aa8.98□□□□□ -0.97
TRAPPC4-213ENST00000533149 GNG10P50151 68 aa8.98□□□□□ -0.97
TRAPPC4-213ENST00000533149 RND3P61587 244 aa8.98□□□□□ -0.97
TRAPPC4-213ENST00000533149 SUPT4H1P63272 117 aaKnown RBP8.98□□□□□ -0.97
TRAPPC4-213ENST00000533149 DHRS2Q13268 280 aa8.98□□□□□ -0.97
TRAPPC4-213ENST00000533149 ZNF626Q68DY1 528 aa8.98□□□□□ -0.97
TRAPPC4-213ENST00000533149 HCP5Q6MZN7 132 aa8.98□□□□□ -0.97
TRAPPC4-213ENST00000533149 CENPVQ7Z7K6 275 aaPredicted RBP8.98□□□□□ -0.97
TRAPPC4-213ENST00000533149 SGPP2Q8IWX5 399 aa8.98□□□□□ -0.97
TRAPPC4-213ENST00000533149 CMTM1Q8IZ96 169 aa8.98□□□□□ -0.97
TRAPPC4-213ENST00000533149 DRAM1Q8N682 238 aa8.98□□□□□ -0.97
TRAPPC4-213ENST00000533149 CCDC71LQ8N9Z2 235 aa8.98□□□□□ -0.97
TRAPPC4-213ENST00000533149 BVESQ8NE79 360 aa8.98□□□□□ -0.97
TRAPPC4-213ENST00000533149 OR2AK2Q8NG84 335 aa8.98□□□□□ -0.97
TRAPPC4-213ENST00000533149 RTN4IP1Q8WWV3 396 aaPredicted RBP8.98□□□□□ -0.97
TRAPPC4-213ENST00000533149 ABHD14BQ96IU4 210 aa8.98□□□□□ -0.97
TRAPPC4-213ENST00000533149 ASCL2Q99929 193 aa8.98□□□□□ -0.97
TRAPPC4-213ENST00000533149 AGMATQ9BSE5 352 aa8.98□□□□□ -0.97
TRAPPC4-213ENST00000533149 MED28Q9H204 178 aa8.98□□□□□ -0.97
TRAPPC4-213ENST00000533149 OR2D2Q9H210 308 aa8.98□□□□□ -0.97
TRAPPC4-213ENST00000533149 SLC2A9Q9NRM0 540 aa8.98□□□□□ -0.97
TRAPPC4-213ENST00000533149 TCF19Q9Y242 345 aa8.98□□□□□ -0.97
TRAPPC4-213ENST00000533149 A0A087X0M5 115 aa8.97□□□□□ -0.97
TRAPPC4-213ENST00000533149 A0A1B0GX30 115 aa8.97□□□□□ -0.97
TRAPPC4-213ENST00000533149 hCG_1809904A0A1W2PP81 198 aa8.97□□□□□ -0.97
TRAPPC4-213ENST00000533149 A0A1W2PPE2 198 aa8.97□□□□□ -0.97
TRAPPC4-213ENST00000533149 A0A1W2PR64 198 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms