RNA–Protein interactions for RNA: ENST00000532893.5

CDC27-209, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-209ENST00000532893 TMEM59Q9BXS4 323 aa10.76□□□□□ -0.69
CDC27-209ENST00000532893 RIMS4Q9H426 269 aaPredicted RBP10.76□□□□□ -0.69
CDC27-209ENST00000532893 DMRT1Q9Y5R6 373 aa10.76□□□□□ -0.69
CDC27-209ENST00000532893 TRBV6-6A0A0A6YYG2 114 aa10.75□□□□□ -0.69
CDC27-209ENST00000532893 LGALS9O00182 355 aa10.75□□□□□ -0.69
CDC27-209ENST00000532893 GGCTO75223 188 aaKnown RBP10.75□□□□□ -0.69
CDC27-209ENST00000532893 WBP4O75554 376 aaKnown RBP10.75□□□□□ -0.69
CDC27-209ENST00000532893 UBBP0CG47 229 aa10.75□□□□□ -0.69
CDC27-209ENST00000532893 MYL12AP19105 171 aa10.75□□□□□ -0.69
CDC27-209ENST00000532893 PRSS8Q16651 343 aa10.75□□□□□ -0.69
CDC27-209ENST00000532893 DEFB135Q30KP9 77 aa10.75□□□□□ -0.69
CDC27-209ENST00000532893 LINC01559Q495D7 138 aa10.75□□□□□ -0.69
CDC27-209ENST00000532893 TMEM177Q53S58 311 aa10.75□□□□□ -0.69
CDC27-209ENST00000532893 IDO2Q6ZQW0 420 aa10.75□□□□□ -0.69
CDC27-209ENST00000532893 SRSF12Q8WXF0 261 aaKnown RBP10.75□□□□□ -0.69
CDC27-209ENST00000532893 KCNK15Q9H427 330 aa10.75□□□□□ -0.69
CDC27-209ENST00000532893 RDH8Q9NYR8 311 aa10.75□□□□□ -0.69
CDC27-209ENST00000532893 MLXQ9UH92 298 aa10.75□□□□□ -0.69
CDC27-209ENST00000532893 AK3Q9UIJ7 227 aa10.75□□□□□ -0.69
CDC27-209ENST00000532893 TP53TG1Q9Y2A0 90 aa10.75□□□□□ -0.69
CDC27-209ENST00000532893 EXOSC1Q9Y3B2 195 aaKnown RBP10.75□□□□□ -0.69
CDC27-209ENST00000532893 VPS13DQ5THJ4 4388 aa10.74□□□□□ -0.69
CDC27-209ENST00000532893 A0A0A6YYD4 124 aa10.74□□□□□ -0.69
CDC27-209ENST00000532893 IGKV1-6A0A0C4DH72 117 aa10.74□□□□□ -0.69
CDC27-209ENST00000532893 OR2J3O76001 311 aa10.74□□□□□ -0.69
CDC27-209ENST00000532893 CBX3Q13185 183 aa10.74□□□□□ -0.69
CDC27-209ENST00000532893 C15orf32Q32M92 178 aa10.74□□□□□ -0.69
CDC27-209ENST00000532893 ANKRD55Q3KP44 614 aa10.74□□□□□ -0.69
CDC27-209ENST00000532893 Q6ZWC4 215 aa10.74□□□□□ -0.69
CDC27-209ENST00000532893 TEX45Q8NA69 505 aa10.74□□□□□ -0.69
CDC27-209ENST00000532893 UXS1Q8NBZ7 420 aa10.74□□□□□ -0.69
CDC27-209ENST00000532893 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.74□□□□□ -0.69
CDC27-209ENST00000532893 NECAP1Q8NC96 275 aa10.74□□□□□ -0.69
CDC27-209ENST00000532893 ZNF485Q8NCK3 441 aa10.74□□□□□ -0.69
CDC27-209ENST00000532893 ACOT12Q8WYK0 555 aa10.74□□□□□ -0.69
CDC27-209ENST00000532893 TM2D1Q9BX74 207 aa10.74□□□□□ -0.69
CDC27-209ENST00000532893 Q9N2K0 584 aa10.74□□□□□ -0.69
CDC27-209ENST00000532893 MGAT4AQ9UM21 535 aa10.74□□□□□ -0.69
CDC27-209ENST00000532893 DIMT1Q9UNQ2 313 aaKnown RBP10.74□□□□□ -0.69
CDC27-209ENST00000532893 ZNF320A2RRD8 509 aa10.73□□□□□ -0.69
CDC27-209ENST00000532893 SOCS1O15524 211 aa10.73□□□□□ -0.69
CDC27-209ENST00000532893 ATF4P18848 351 aaPredicted RBP10.73□□□□□ -0.69
CDC27-209ENST00000532893 UNC119Q13432 240 aa10.73□□□□□ -0.69
CDC27-209ENST00000532893 VMA21Q3ZAQ7 101 aa10.73□□□□□ -0.69
CDC27-209ENST00000532893 GPHB5Q86YW7 130 aa10.73□□□□□ -0.69
CDC27-209ENST00000532893 TTC9CQ8N5M4 171 aa10.73□□□□□ -0.69
CDC27-209ENST00000532893 GGHQ92820 318 aa10.73□□□□□ -0.69
CDC27-209ENST00000532893 SDHAF2Q9NX18 166 aa10.73□□□□□ -0.69
CDC27-209ENST00000532893 TMEM213A2RRL7 107 aa10.72□□□□□ -0.69
CDC27-209ENST00000532893 CIB2O75838 187 aa10.72□□□□□ -0.69
CDC27-209ENST00000532893 IGHV3-23P01764 117 aa10.72□□□□□ -0.69
CDC27-209ENST00000532893 CD3GP09693 182 aa10.72□□□□□ -0.69
CDC27-209ENST00000532893 CELP19835 753 aa10.72□□□□□ -0.69
CDC27-209ENST00000532893 APOC4P55056 127 aa10.72□□□□□ -0.69
CDC27-209ENST00000532893 UBE2KP61086 200 aa10.72□□□□□ -0.69
CDC27-209ENST00000532893 TAGLNQ01995 201 aaKnown RBP10.72□□□□□ -0.69
CDC27-209ENST00000532893 RTL8BQ17RB0 113 aa10.72□□□□□ -0.69
CDC27-209ENST00000532893 FAM106AQ4KMX7 169 aa10.72□□□□□ -0.69
CDC27-209ENST00000532893 FAM209BQ5JX69 171 aa10.72□□□□□ -0.69
CDC27-209ENST00000532893 C1orf100Q5SVJ3 147 aa10.72□□□□□ -0.69
CDC27-209ENST00000532893 C5orf30Q96GV9 206 aa10.72□□□□□ -0.69
CDC27-209ENST00000532893 SPIN2AQ99865 258 aa10.72□□□□□ -0.69
CDC27-209ENST00000532893 SPIN2BQ9BPZ2 258 aa10.72□□□□□ -0.69
CDC27-209ENST00000532893 OR2D2Q9H210 308 aa10.72□□□□□ -0.69
CDC27-209ENST00000532893 S4R3C0 116 aa10.72□□□□□ -0.69
CDC27-209ENST00000532893 IRGMA1A4Y4 181 aa10.71□□□□□ -0.69
CDC27-209ENST00000532893 TMEM14DPA8MWL7 114 aa10.71□□□□□ -0.69
CDC27-209ENST00000532893 ARL3P36405 182 aa10.71□□□□□ -0.69
CDC27-209ENST00000532893 RASSF2P50749 326 aa10.71□□□□□ -0.69
CDC27-209ENST00000532893 QRFPP83859 136 aa10.71□□□□□ -0.69
CDC27-209ENST00000532893 INSL4Q14641 139 aa10.71□□□□□ -0.69
CDC27-209ENST00000532893 GLT8D1Q68CQ7 371 aa10.71□□□□□ -0.69
CDC27-209ENST00000532893 BTNL8Q6UX41 500 aa10.71□□□□□ -0.69
CDC27-209ENST00000532893 CLEC19AQ6UXS0 136 aa10.71□□□□□ -0.69
CDC27-209ENST00000532893 C19orf35Q6ZS72 473 aa10.71□□□□□ -0.69
CDC27-209ENST00000532893 TMEM217Q8N7C4 229 aa10.71□□□□□ -0.69
CDC27-209ENST00000532893 RNF183Q96D59 192 aa10.71□□□□□ -0.69
CDC27-209ENST00000532893 TMEM80Q96HE8 168 aa10.71□□□□□ -0.69
CDC27-209ENST00000532893 ZNF430Q9H8G1 570 aaPredicted RBP10.71□□□□□ -0.69
CDC27-209ENST00000532893 FBXL7Q9UJT9 491 aa10.71□□□□□ -0.69
CDC27-209ENST00000532893 HMX3A6NHT5 357 aa10.7□□□□□ -0.7
CDC27-209ENST00000532893 TRDCB7Z8K6 153 aa10.7□□□□□ -0.7
CDC27-209ENST00000532893 UBE2CO00762 179 aa10.7□□□□□ -0.7
CDC27-209ENST00000532893 BET1O15155 118 aa10.7□□□□□ -0.7
CDC27-209ENST00000532893 ACTL6BO94805 426 aa10.7□□□□□ -0.7
CDC27-209ENST00000532893 CRYZL1O95825 349 aa10.7□□□□□ -0.7
CDC27-209ENST00000532893 RRASP10301 218 aa10.7□□□□□ -0.7
CDC27-209ENST00000532893 SRMP19623 302 aa10.7□□□□□ -0.7
CDC27-209ENST00000532893 MAPK3P27361 379 aaPredicted RBP10.7□□□□□ -0.7
CDC27-209ENST00000532893 TAS2R43P59537 309 aa10.7□□□□□ -0.7
CDC27-209ENST00000532893 MED21Q13503 144 aa10.7□□□□□ -0.7
CDC27-209ENST00000532893 C10orf55Q5SWW7 151 aa10.7□□□□□ -0.7
CDC27-209ENST00000532893 RBPMS2Q6ZRY4 209 aaKnown RBP10.7□□□□□ -0.7
CDC27-209ENST00000532893 LRRTM1Q86UE6 522 aa10.7□□□□□ -0.7
CDC27-209ENST00000532893 STPG3Q8N7X2 389 aa10.7□□□□□ -0.7
CDC27-209ENST00000532893 OR1L6Q8NGR2 347 aa10.7□□□□□ -0.7
CDC27-209ENST00000532893 C9orf16Q9BUW7 83 aa10.7□□□□□ -0.7
CDC27-209ENST00000532893 LPAR5Q9H1C0 372 aa10.7□□□□□ -0.7
CDC27-209ENST00000532893 C12orf4Q9NQ89 552 aa10.7□□□□□ -0.7
CDC27-209ENST00000532893 UBQLN2Q9UHD9 624 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms