RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 RND2P52198 227 aa12.64□□□□□ -0.39
PCDHA9-202ENST00000532602 OR11H7Q8NGC8 314 aa12.64□□□□□ -0.39
PCDHA9-202ENST00000532602 C12orf57Q99622 126 aa12.64□□□□□ -0.39
PCDHA9-202ENST00000532602 QTRT1Q9BXR0 403 aaKnown RBP12.64□□□□□ -0.39
PCDHA9-202ENST00000532602 SMDT1Q9H4I9 107 aa12.64□□□□□ -0.39
PCDHA9-202ENST00000532602 EP300Q09472 2414 aaPredicted RBP12.64□□□□□ -0.39
PCDHA9-202ENST00000532602 IGHMP01871 453 aa12.64□□□□□ -0.39
PCDHA9-202ENST00000532602 RELQ04864 619 aaPredicted RBP12.64□□□□□ -0.39
PCDHA9-202ENST00000532602 AMMECR1LQ6DCA0 310 aa12.64□□□□□ -0.39
PCDHA9-202ENST00000532602 HSPB8Q9UJY1 196 aa12.64□□□□□ -0.39
PCDHA9-202ENST00000532602 PSMB2P49721 201 aa12.64□□□□□ -0.39
PCDHA9-202ENST00000532602 C19orf54Q5BKX5 351 aa12.64□□□□□ -0.39
PCDHA9-202ENST00000532602 MIEN1Q9BRT3 115 aa12.64□□□□□ -0.39
PCDHA9-202ENST00000532602 CEBPEQ15744 281 aa12.64□□□□□ -0.39
PCDHA9-202ENST00000532602 SOSTQ9BQB4 213 aa12.64□□□□□ -0.39
PCDHA9-202ENST00000532602 TMEM140Q9NV12 185 aa12.64□□□□□ -0.39
PCDHA9-202ENST00000532602 THY1P04216 161 aa12.64□□□□□ -0.39
PCDHA9-202ENST00000532602 ATP5IP56385 69 aaPredicted RBP12.64□□□□□ -0.39
PCDHA9-202ENST00000532602 OVCH2Q7RTZ1 564 aa12.64□□□□□ -0.39
PCDHA9-202ENST00000532602 PNKDQ8N490 385 aa12.64□□□□□ -0.39
PCDHA9-202ENST00000532602 ELOA3CA0A087WX78 387 aaPredicted RBP12.63□□□□□ -0.39
PCDHA9-202ENST00000532602 TMEM218A2RU14 115 aa12.63□□□□□ -0.39
PCDHA9-202ENST00000532602 NPIPB11E5RHQ5 1161 aa12.63□□□□□ -0.39
PCDHA9-202ENST00000532602 CSRP3P50461 194 aa12.63□□□□□ -0.39
PCDHA9-202ENST00000532602 EEF1AKMT3Q96AZ1 226 aa12.63□□□□□ -0.39
PCDHA9-202ENST00000532602 TLNRD1Q9H1K6 362 aa12.63□□□□□ -0.39
PCDHA9-202ENST00000532602 CACNA1GO43497 2377 aa12.63□□□□□ -0.39
PCDHA9-202ENST00000532602 ZNF79Q15937 498 aa12.63□□□□□ -0.39
PCDHA9-202ENST00000532602 ANGPTL6Q8NI99 470 aa12.63□□□□□ -0.39
PCDHA9-202ENST00000532602 DLK1P80370 383 aa12.63□□□□□ -0.39
PCDHA9-202ENST00000532602 PSG9Q00887 426 aa12.63□□□□□ -0.39
PCDHA9-202ENST00000532602 TMEM252Q8N6L7 170 aa12.63□□□□□ -0.39
PCDHA9-202ENST00000532602 FAM216AQ8WUB2 273 aa12.63□□□□□ -0.39
PCDHA9-202ENST00000532602 MEOX2P50222 304 aa12.63□□□□□ -0.39
PCDHA9-202ENST00000532602 TNFSF10P50591 281 aa12.62□□□□□ -0.39
PCDHA9-202ENST00000532602 FGFRL1Q8N441 504 aa12.62□□□□□ -0.39
PCDHA9-202ENST00000532602 IL22RA2Q969J5 263 aa12.62□□□□□ -0.39
PCDHA9-202ENST00000532602 PLA2G10O15496 165 aa12.62□□□□□ -0.39
PCDHA9-202ENST00000532602 PGLYRP1O75594 196 aaPredicted RBP12.62□□□□□ -0.39
PCDHA9-202ENST00000532602 ZNF343Q6P1L6 599 aa12.62□□□□□ -0.39
PCDHA9-202ENST00000532602 OR4B1Q8NGF8 309 aa12.62□□□□□ -0.39
PCDHA9-202ENST00000532602 TUBD1Q9UJT1 453 aa12.62□□□□□ -0.39
PCDHA9-202ENST00000532602 IGKV1D-43A0A0B4J1Z2 117 aa12.62□□□□□ -0.39
PCDHA9-202ENST00000532602 UBE2L6O14933 153 aa12.62□□□□□ -0.39
PCDHA9-202ENST00000532602 ZIC3O60481 467 aa12.62□□□□□ -0.39
PCDHA9-202ENST00000532602 KBTBD11O94819 623 aa12.62□□□□□ -0.39
PCDHA9-202ENST00000532602 KLK2P20151 261 aa12.62□□□□□ -0.39
PCDHA9-202ENST00000532602 FAM201AQ5SY85 155 aa12.62□□□□□ -0.39
PCDHA9-202ENST00000532602 OR5AU1Q8NGC0 362 aa12.62□□□□□ -0.39
PCDHA9-202ENST00000532602 TMEM106BQ9NUM4 274 aa12.62□□□□□ -0.39
PCDHA9-202ENST00000532602 GPR132Q9UNW8 380 aa12.62□□□□□ -0.39
PCDHA9-202ENST00000532602 APCSP02743 223 aa12.62□□□□□ -0.39
PCDHA9-202ENST00000532602 CRYBA2P53672 197 aa12.62□□□□□ -0.39
PCDHA9-202ENST00000532602 SRSF9Q13242 221 aaKnown RBP eCLIP12.62□□□□□ -0.39
PCDHA9-202ENST00000532602 G6PC2Q9NQR9 355 aa12.62□□□□□ -0.39
PCDHA9-202ENST00000532602 MGAMO43451 1857 aa12.62□□□□□ -0.39
PCDHA9-202ENST00000532602 FAM181BA6NEQ2 426 aa12.62□□□□□ -0.39
PCDHA9-202ENST00000532602 WDFY1Q8IWB7 410 aa12.62□□□□□ -0.39
PCDHA9-202ENST00000532602 THSD7BQ9C0I4 1608 aa12.62□□□□□ -0.39
PCDHA9-202ENST00000532602 SNURFLB1AK76 121 aa12.61□□□□□ -0.39
PCDHA9-202ENST00000532602 UBE2V2Q15819 145 aa12.61□□□□□ -0.39
PCDHA9-202ENST00000532602 NRN1LQ496H8 165 aa12.61□□□□□ -0.39
PCDHA9-202ENST00000532602 HSPB7Q9UBY9 170 aa12.61□□□□□ -0.39
PCDHA9-202ENST00000532602 THADAQ6YHU6 1953 aa12.61□□□□□ -0.39
PCDHA9-202ENST00000532602 TRBV5-7A0A0A0MS05 114 aa12.61□□□□□ -0.39
PCDHA9-202ENST00000532602 NPPCP23582 126 aa12.61□□□□□ -0.39
PCDHA9-202ENST00000532602 RAB24Q969Q5 203 aa12.61□□□□□ -0.39
PCDHA9-202ENST00000532602 CDC42EP3Q9UKI2 254 aa12.61□□□□□ -0.39
PCDHA9-202ENST00000532602 REG1AP05451 166 aa12.61□□□□□ -0.39
PCDHA9-202ENST00000532602 CD59P13987 128 aa12.61□□□□□ -0.39
PCDHA9-202ENST00000532602 SNRPD3P62318 126 aaKnown RBP12.61□□□□□ -0.39
PCDHA9-202ENST00000532602 UNC119Q13432 240 aa12.61□□□□□ -0.39
PCDHA9-202ENST00000532602 IGHV3OR16-12A0A075B7B8 117 aa12.61□□□□□ -0.39
PCDHA9-202ENST00000532602 MARCH11A6NNE9 402 aa12.61□□□□□ -0.39
PCDHA9-202ENST00000532602 BCL2P10415 239 aa12.61□□□□□ -0.39
PCDHA9-202ENST00000532602 RCC1P18754 421 aaPredicted RBP12.61□□□□□ -0.39
PCDHA9-202ENST00000532602 ZNF418Q8TF45 676 aaPredicted RBP12.61□□□□□ -0.39
PCDHA9-202ENST00000532602 RGP1Q92546 391 aaPredicted RBP12.61□□□□□ -0.39
PCDHA9-202ENST00000532602 ST6GAL2Q96JF0 529 aa12.61□□□□□ -0.39
PCDHA9-202ENST00000532602 MEGF10Q96KG7 1140 aa12.61□□□□□ -0.39
PCDHA9-202ENST00000532602 NRIP2Q9BQI9 281 aa12.61□□□□□ -0.39
PCDHA9-202ENST00000532602 IGKV3D-11A0A0A0MRZ8 115 aa12.61□□□□□ -0.39
PCDHA9-202ENST00000532602 C5orf52A6NGY3 159 aa12.61□□□□□ -0.39
PCDHA9-202ENST00000532602 FCGR2BP31994 310 aaPredicted RBP12.61□□□□□ -0.39
PCDHA9-202ENST00000532602 RPS20P60866 119 aaKnown RBP12.61□□□□□ -0.39
PCDHA9-202ENST00000532602 BSPH1Q075Z2 132 aa12.61□□□□□ -0.39
PCDHA9-202ENST00000532602 Q96M66 194 aa12.61□□□□□ -0.39
PCDHA9-202ENST00000532602 GLIPR1P48060 266 aa12.6□□□□□ -0.39
PCDHA9-202ENST00000532602 FXYD3Q14802 87 aa12.6□□□□□ -0.39
PCDHA9-202ENST00000532602 FAM168AQ92567 244 aa12.6□□□□□ -0.39
PCDHA9-202ENST00000532602 DUX5Q96PT3 197 aa12.6□□□□□ -0.39
PCDHA9-202ENST00000532602 RBKSQ9H477 322 aa12.6□□□□□ -0.39
PCDHA9-202ENST00000532602 H3BQ15 152 aa12.6□□□□□ -0.39
PCDHA9-202ENST00000532602 CELA3BP08861 270 aa12.6□□□□□ -0.39
PCDHA9-202ENST00000532602 IER3P46695 156 aa12.6□□□□□ -0.39
PCDHA9-202ENST00000532602 LCN2P80188 198 aa12.6□□□□□ -0.39
PCDHA9-202ENST00000532602 VKORC1L1Q8N0U8 176 aa12.6□□□□□ -0.39
PCDHA9-202ENST00000532602 OR5P3Q8WZ94 311 aa12.6□□□□□ -0.39
PCDHA9-202ENST00000532602 ELOVL1Q9BW60 279 aa12.6□□□□□ -0.39
PCDHA9-202ENST00000532602 TWIST1Q15672 202 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms