RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 TEX43Q6ZNM6 134 aa5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 FDCSPQ8NFU4 85 aa5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 TRIB1Q96RU8 372 aa5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 C12orf49Q9H741 205 aa5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 PIGLQ9Y2B2 252 aa5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 TRGV8A0A0C4DH27 118 aa5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 NKX2-2O95096 273 aa5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 HLA-DQA1P01909 254 aa5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 CYC1P08574 325 aa5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 DCAF7P61962 342 aa5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 SUPT4H1P63272 117 aaKnown RBP5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 FOXK1P85037 733 aa5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 ZFP36L1Q07352 338 aaKnown RBP5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 TMEM187Q14656 261 aa5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 PRICKLE4Q2TBC4 344 aa5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 FAM90A2PQ658T7 463 aa5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 TCF23Q7RTU1 214 aa5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 BMPERQ8N8U9 685 aa5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 ZNRF4Q8WWF5 429 aa5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 DAZAP1Q96EP5 407 aaKnown RBP5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 ATP6V0BQ99437 205 aa5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 PSMG3Q9BT73 122 aaPredicted RBP5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 MAP1LC3CQ9BXW4 147 aa5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 FNDC4Q9H6D8 234 aaPredicted RBP5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 JKAMPQ9P055 326 aa5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 B4GALT7Q9UBV7 327 aa5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 HSPB8Q9UJY1 196 aa5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 BOD1L1Q8NFC6 3051 aa5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 NTN3O00634 580 aaPredicted RBP5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 MPZL1O95297 269 aa5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 CCL3P10147 92 aa5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 CSRP1P21291 193 aaKnown RBP5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 GNG4P50150 75 aa5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 MFAP5Q13361 173 aa5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 KCNMB1Q16558 191 aa5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 LTC4SQ16873 150 aa5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 SPSB3Q6PJ21 355 aa5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 OR10V1Q8NGI7 309 aa5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 OR2K2Q8NGT1 345 aa5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 DPF1Q92782 380 aa5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 RASL10BQ96S79 203 aa5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 EMC6Q9BV81 110 aa5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 ZNF703Q9H7S9 590 aaPredicted RBP5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 CACNG5Q9UF02 275 aa5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 SPCS1Q9Y6A9 102 aa5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 OBSL1O75147 1896 aa5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 A0A1W2PP11 408 aa5.82□□□□□ -1.48
TGFBR3-209ENST00000532540 LINC00869P0C866 280 aa5.82□□□□□ -1.48
TGFBR3-209ENST00000532540 FCER1GP30273 86 aa5.82□□□□□ -1.48
TGFBR3-209ENST00000532540 TMEM50BP56557 158 aa5.82□□□□□ -1.48
TGFBR3-209ENST00000532540 ZNF121P58317 390 aaPredicted RBP5.82□□□□□ -1.48
TGFBR3-209ENST00000532540 RPS20P60866 119 aaKnown RBP5.82□□□□□ -1.48
TGFBR3-209ENST00000532540 GRB2P62993 217 aaKnown RBP5.82□□□□□ -1.48
TGFBR3-209ENST00000532540 MPV17L2Q567V2 206 aa5.82□□□□□ -1.48
TGFBR3-209ENST00000532540 LRRC10Q5BKY1 277 aa5.82□□□□□ -1.48
TGFBR3-209ENST00000532540 Q6ZVH6 145 aa5.82□□□□□ -1.48
TGFBR3-209ENST00000532540 TBC1D26Q86UD7 250 aa5.82□□□□□ -1.48
TGFBR3-209ENST00000532540 CALHM1Q8IU99 346 aa5.82□□□□□ -1.48
TGFBR3-209ENST00000532540 C9orf40Q8IXQ3 194 aa5.82□□□□□ -1.48
TGFBR3-209ENST00000532540 FER1L6-AS1Q8NA97 138 aa5.82□□□□□ -1.48
TGFBR3-209ENST00000532540 OR4S2Q8NH73 311 aa5.82□□□□□ -1.48
TGFBR3-209ENST00000532540 OR2T6Q8NHC8 308 aa5.82□□□□□ -1.48
TGFBR3-209ENST00000532540 TM4SF19Q96DZ7 209 aa5.82□□□□□ -1.48
TGFBR3-209ENST00000532540 SFRP2Q96HF1 295 aa5.82□□□□□ -1.48
TGFBR3-209ENST00000532540 GPR27Q9NS67 375 aa5.82□□□□□ -1.48
TGFBR3-209ENST00000532540 C7orf71A4D174 169 aa5.82□□□□□ -1.48
TGFBR3-209ENST00000532540 TMEM14DPA8MWL7 114 aa5.82□□□□□ -1.48
TGFBR3-209ENST00000532540 CD55P08174 381 aa5.82□□□□□ -1.48
TGFBR3-209ENST00000532540 CLDN18P56856 261 aa5.82□□□□□ -1.48
TGFBR3-209ENST00000532540 RELBQ01201 579 aa5.82□□□□□ -1.48
TGFBR3-209ENST00000532540 UNC119Q13432 240 aa5.82□□□□□ -1.48
TGFBR3-209ENST00000532540 OR8B3Q8NGG8 313 aa5.82□□□□□ -1.48
TGFBR3-209ENST00000532540 OR5D13Q8NGL4 314 aa5.82□□□□□ -1.48
TGFBR3-209ENST00000532540 DDIT4LQ96D03 193 aa5.82□□□□□ -1.48
TGFBR3-209ENST00000532540 TMEM147Q9BVK8 224 aa5.82□□□□□ -1.48
TGFBR3-209ENST00000532540 OR2D2Q9H210 308 aa5.82□□□□□ -1.48
TGFBR3-209ENST00000532540 NUP210Q8TEM1 1887 aaPredicted RBP5.82□□□□□ -1.48
TGFBR3-209ENST00000532540 TRAV1-1A0A0B4J248 108 aa5.82□□□□□ -1.48
TGFBR3-209ENST00000532540 A0A0U1RQV5 110 aa5.82□□□□□ -1.48
TGFBR3-209ENST00000532540 H3BUT2 72 aa5.82□□□□□ -1.48
TGFBR3-209ENST00000532540 CHEK1O14757 476 aa5.82□□□□□ -1.48
TGFBR3-209ENST00000532540 DEGS1O15121 323 aa5.82□□□□□ -1.48
TGFBR3-209ENST00000532540 UCP2P55851 309 aa5.82□□□□□ -1.48
TGFBR3-209ENST00000532540 PSG6Q00889 435 aa5.82□□□□□ -1.48
TGFBR3-209ENST00000532540 ROM1Q03395 351 aa5.82□□□□□ -1.48
TGFBR3-209ENST00000532540 FUT7Q11130 342 aa5.82□□□□□ -1.48
TGFBR3-209ENST00000532540 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.82□□□□□ -1.48
TGFBR3-209ENST00000532540 ZNF324BQ6AW86 544 aaPredicted RBP5.82□□□□□ -1.48
TGFBR3-209ENST00000532540 PRR7Q8TB68 274 aa5.82□□□□□ -1.48
TGFBR3-209ENST00000532540 PP6455Q8WZ26 134 aa5.82□□□□□ -1.48
TGFBR3-209ENST00000532540 KCNS1Q96KK3 526 aa5.82□□□□□ -1.48
TGFBR3-209ENST00000532540 TMEM56Q96MV1 263 aa5.82□□□□□ -1.48
TGFBR3-209ENST00000532540 GPX7Q96SL4 187 aaPredicted RBP5.82□□□□□ -1.48
TGFBR3-209ENST00000532540 ZNF319Q9P2F9 582 aa5.82□□□□□ -1.48
TGFBR3-209ENST00000532540 PRR32B1ATL7 298 aa5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 PPIAL4DF5H284 164 aa5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 PPYP01298 95 aa5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 OTX1P32242 354 aaPredicted RBP5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 CDKN1AP38936 164 aa5.81□□□□□ -1.48
TGFBR3-209ENST00000532540 RBPJQ06330 500 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms