RNA–Protein interactions for RNA: ENST00000532370.1

CTSB-223, Transcript of cathepsin B, human

TSL 2

Gene CTSB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-223	ENST00000532370	SHOX	O15266	292 aa		13.61	□□□□□ -0.23
CTSB-223	ENST00000532370	SPDEF	O95238	335 aa		13.61	□□□□□ -0.23
CTSB-223	ENST00000532370	CRYZL1	O95825	349 aa		13.61	□□□□□ -0.23
CTSB-223	ENST00000532370	PPY	P01298	95 aa		13.61	□□□□□ -0.23
CTSB-223	ENST00000532370	PF4	P02776	101 aa		13.61	□□□□□ -0.23
CTSB-223	ENST00000532370	CRYGB	P07316	175 aa		13.61	□□□□□ -0.23
CTSB-223	ENST00000532370	LGALS7	P47929	136 aa		13.61	□□□□□ -0.23
CTSB-223	ENST00000532370	RFX2	P48378	723 aa		13.61	□□□□□ -0.23
CTSB-223	ENST00000532370	TAGLN	Q01995	201 aa	Known RBP	13.61	□□□□□ -0.23
CTSB-223	ENST00000532370	EIF4EBP1	Q13541	118 aa	Predicted RBP	13.61	□□□□□ -0.23
CTSB-223	ENST00000532370	CDK10	Q15131	360 aa		13.61	□□□□□ -0.23
CTSB-223	ENST00000532370	OXLD1	Q5BKU9	147 aa		13.61	□□□□□ -0.23
CTSB-223	ENST00000532370	C19orf54	Q5BKX5	351 aa		13.61	□□□□□ -0.23
CTSB-223	ENST00000532370	ZNF562	Q6V9R5	426 aa		13.61	□□□□□ -0.23
CTSB-223	ENST00000532370	ZNF695	Q8IW36	515 aa		13.61	□□□□□ -0.23
CTSB-223	ENST00000532370	MINDY2	Q8NBR6	621 aa		13.61	□□□□□ -0.23
CTSB-223	ENST00000532370	WFDC9	Q8NEX5	89 aa		13.61	□□□□□ -0.23
CTSB-223	ENST00000532370	ABHD5	Q8WTS1	349 aa		13.61	□□□□□ -0.23
CTSB-223	ENST00000532370	CASTOR1	Q8WTX7	329 aa		13.61	□□□□□ -0.23
CTSB-223	ENST00000532370	SECTM1	Q8WVN6	248 aa		13.61	□□□□□ -0.23
CTSB-223	ENST00000532370	ISOC1	Q96CN7	298 aa		13.61	□□□□□ -0.23
CTSB-223	ENST00000532370	CCL28	Q9NRJ3	127 aa		13.61	□□□□□ -0.23
CTSB-223	ENST00000532370	FAM25A	B3EWG3	89 aa		13.6	□□□□□ -0.23
CTSB-223	ENST00000532370	FAM25C	B3EWG5	89 aa		13.6	□□□□□ -0.23
CTSB-223	ENST00000532370	FAM25G	B3EWG6	89 aa		13.6	□□□□□ -0.23
CTSB-223	ENST00000532370		H3BMQ9	156 aa		13.6	□□□□□ -0.23
CTSB-223	ENST00000532370	ZNF701	M0R085	212 aa	Predicted RBP	13.6	□□□□□ -0.23
CTSB-223	ENST00000532370	TNFSF12	O43508	249 aa		13.6	□□□□□ -0.23
CTSB-223	ENST00000532370	SOX15	O60248	233 aa		13.6	□□□□□ -0.23
CTSB-223	ENST00000532370	FCGR3B	O75015	233 aa		13.6	□□□□□ -0.23
CTSB-223	ENST00000532370	PMP2	P02689	132 aa		13.6	□□□□□ -0.23
CTSB-223	ENST00000532370	RRAS	P10301	218 aa		13.6	□□□□□ -0.23
CTSB-223	ENST00000532370	NAT1	P18440	290 aa		13.6	□□□□□ -0.23
CTSB-223	ENST00000532370	BRWD1-AS2	P59051	145 aa		13.6	□□□□□ -0.23
CTSB-223	ENST00000532370	FXYD4	P59646	89 aa		13.6	□□□□□ -0.23
CTSB-223	ENST00000532370	GNB1	P62873	340 aa		13.6	□□□□□ -0.23
CTSB-223	ENST00000532370	SSBP2	P81877	361 aa	Predicted RBP	13.6	□□□□□ -0.23
CTSB-223	ENST00000532370	KIAA0141	Q14154	515 aa	Predicted RBP	13.6	□□□□□ -0.23
CTSB-223	ENST00000532370	SAMD5	Q5TGI4	173 aa		13.6	□□□□□ -0.23
CTSB-223	ENST00000532370	MZT2A	Q6P582	158 aa		13.6	□□□□□ -0.23
CTSB-223	ENST00000532370	PPP1R27	Q86WC6	154 aa		13.6	□□□□□ -0.23
CTSB-223	ENST00000532370	LYSMD2	Q8IV50	215 aa		13.6	□□□□□ -0.23
CTSB-223	ENST00000532370	GPX8	Q8TED1	209 aa		13.6	□□□□□ -0.23
CTSB-223	ENST00000532370	AP3S1	Q92572	193 aa		13.6	□□□□□ -0.23
CTSB-223	ENST00000532370	TAS2R8	Q9NYW2	309 aa		13.6	□□□□□ -0.23
CTSB-223	ENST00000532370	NUBP2	Q9Y5Y2	271 aa		13.6	□□□□□ -0.23
CTSB-223	ENST00000532370	SLC22A5	O76082	557 aa		13.59	□□□□□ -0.23
CTSB-223	ENST00000532370	IGLV1-40	P01703	118 aa		13.59	□□□□□ -0.23
CTSB-223	ENST00000532370	IGLL1	P15814	213 aa		13.59	□□□□□ -0.23
CTSB-223	ENST00000532370	CD33	P20138	364 aa		13.59	□□□□□ -0.23
CTSB-223	ENST00000532370	HLA-DMA	P28067	261 aa		13.59	□□□□□ -0.23
CTSB-223	ENST00000532370	CRIP2	P52943	208 aa	Predicted RBP	13.59	□□□□□ -0.23
CTSB-223	ENST00000532370	CBX3	Q13185	183 aa		13.59	□□□□□ -0.23
CTSB-223	ENST00000532370	FXYD3	Q14802	87 aa		13.59	□□□□□ -0.23
CTSB-223	ENST00000532370	MRGPRG-AS1	Q2M3A8	158 aa		13.59	□□□□□ -0.23
CTSB-223	ENST00000532370	DEFB136	Q30KP8	78 aa		13.59	□□□□□ -0.23
CTSB-223	ENST00000532370	IDO2	Q6ZQW0	420 aa		13.59	□□□□□ -0.23
CTSB-223	ENST00000532370	KCTD9	Q7L273	389 aa		13.59	□□□□□ -0.23
CTSB-223	ENST00000532370	OVCH2	Q7RTZ1	564 aa		13.59	□□□□□ -0.23
CTSB-223	ENST00000532370	MRPL41	Q8IXM3	137 aa	Known RBP	13.59	□□□□□ -0.23
CTSB-223	ENST00000532370	GRPEL2	Q8TAA5	225 aa		13.59	□□□□□ -0.23
CTSB-223	ENST00000532370	GIMAP1	Q8WWP7	306 aa		13.59	□□□□□ -0.23
CTSB-223	ENST00000532370	RAX2	Q96IS3	184 aa		13.59	□□□□□ -0.23
CTSB-223	ENST00000532370	EHF	Q9NZC4	300 aa		13.59	□□□□□ -0.23
CTSB-223	ENST00000532370		A0A1W2PN81	502 aa		13.58	□□□□□ -0.24
CTSB-223	ENST00000532370	WIPF1	O43516	503 aa		13.58	□□□□□ -0.24
CTSB-223	ENST00000532370	NOL3	O60936	208 aa	Known RBP	13.58	□□□□□ -0.24
CTSB-223	ENST00000532370	CHRNA7	P36544	502 aa		13.58	□□□□□ -0.24
CTSB-223	ENST00000532370	CDX1	P47902	265 aa	Predicted RBP	13.58	□□□□□ -0.24
CTSB-223	ENST00000532370	BEAN1	Q3B7T3	259 aa		13.58	□□□□□ -0.24
CTSB-223	ENST00000532370	TMEM65	Q6PI78	240 aa		13.58	□□□□□ -0.24
CTSB-223	ENST00000532370	MFSD4A	Q8N468	514 aa		13.58	□□□□□ -0.24
CTSB-223	ENST00000532370	LINC00482	Q8N8I6	264 aa		13.58	□□□□□ -0.24
CTSB-223	ENST00000532370	LFNG	Q8NES3	379 aa		13.58	□□□□□ -0.24
CTSB-223	ENST00000532370	MYOZ3	Q8TDC0	251 aa		13.58	□□□□□ -0.24
CTSB-223	ENST00000532370	TCTEX1D2	Q8WW35	142 aa		13.58	□□□□□ -0.24
CTSB-223	ENST00000532370	ARPC1A	Q92747	370 aa		13.58	□□□□□ -0.24
CTSB-223	ENST00000532370	HSD17B10	Q99714	261 aa	Known RBP	13.58	□□□□□ -0.24
CTSB-223	ENST00000532370	DCUN1D5	Q9BTE7	237 aa		13.58	□□□□□ -0.24
CTSB-223	ENST00000532370	SLC5A7	Q9GZV3	580 aa		13.58	□□□□□ -0.24
CTSB-223	ENST00000532370	PLXNB1	O43157	2135 aa		13.58	□□□□□ -0.24
CTSB-223	ENST00000532370	CTDSP2	O14595	271 aa		13.57	□□□□□ -0.24
CTSB-223	ENST00000532370	CNIH1	O95406	144 aa		13.57	□□□□□ -0.24
CTSB-223	ENST00000532370	HRH1	P35367	487 aa		13.57	□□□□□ -0.24
CTSB-223	ENST00000532370	RAB9A	P51151	201 aa		13.57	□□□□□ -0.24
CTSB-223	ENST00000532370	UBE2K	P61086	200 aa		13.57	□□□□□ -0.24
CTSB-223	ENST00000532370	DYRK1A	Q13627	763 aa		13.57	□□□□□ -0.24
CTSB-223	ENST00000532370	RNASE12	Q5GAN4	147 aa	Known RBP	13.57	□□□□□ -0.24
CTSB-223	ENST00000532370	UNQ5815/PRO19632	Q6UWF5	114 aa		13.57	□□□□□ -0.24
CTSB-223	ENST00000532370	DHRS11	Q6UWP2	260 aa		13.57	□□□□□ -0.24
CTSB-223	ENST00000532370	TMEM17	Q86X19	198 aa		13.57	□□□□□ -0.24
CTSB-223	ENST00000532370	VKORC1L1	Q8N0U8	176 aa		13.57	□□□□□ -0.24
CTSB-223	ENST00000532370	OR5H2	Q8NGV7	314 aa		13.57	□□□□□ -0.24
CTSB-223	ENST00000532370	ZNF2	Q9BSG1	426 aa	Predicted RBP	13.57	□□□□□ -0.24
CTSB-223	ENST00000532370	MIXL1	Q9H2W2	232 aa		13.57	□□□□□ -0.24
CTSB-223	ENST00000532370	GNB4	Q9HAV0	340 aa		13.57	□□□□□ -0.24
CTSB-223	ENST00000532370	EXTL2	Q9UBQ6	330 aa		13.57	□□□□□ -0.24
CTSB-223	ENST00000532370	FOXA2	Q9Y261	457 aa	Predicted RBP	13.57	□□□□□ -0.24
CTSB-223	ENST00000532370	PRELID3B	Q9Y3B1	194 aa		13.57	□□□□□ -0.24
CTSB-223	ENST00000532370	CCL24	O00175	119 aa		13.56	□□□□□ -0.24

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