RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 ZFAND6Q6FIF0 208 aa13.41□□□□□ -0.26
PKP3-208ENST00000531857 OR10V1Q8NGI7 309 aa13.41□□□□□ -0.26
PKP3-208ENST00000531857 RITA1Q96K30 269 aa13.41□□□□□ -0.26
PKP3-208ENST00000531857 METTL9Q9H1A3 318 aa13.41□□□□□ -0.26
PKP3-208ENST00000531857 HRASLSQ9HDD0 168 aa13.41□□□□□ -0.26
PKP3-208ENST00000531857 LYSTQ99698 3801 aa13.4□□□□□ -0.26
PKP3-208ENST00000531857 C7orf66A4D0T2 115 aa13.4□□□□□ -0.26
PKP3-208ENST00000531857 C12orf77C9JDV5 145 aa13.4□□□□□ -0.26
PKP3-208ENST00000531857 SAP30O75446 220 aa13.4□□□□□ -0.26
PKP3-208ENST00000531857 CSTBP04080 98 aaKnown RBP13.4□□□□□ -0.26
PKP3-208ENST00000531857 CNTFRP26992 372 aa13.4□□□□□ -0.26
PKP3-208ENST00000531857 MEF2DQ14814 521 aa13.4□□□□□ -0.26
PKP3-208ENST00000531857 MMDQ15546 238 aa13.4□□□□□ -0.26
PKP3-208ENST00000531857 Q3ZCU0 254 aa13.4□□□□□ -0.26
PKP3-208ENST00000531857 GLIPR1L1Q6UWM5 242 aa13.4□□□□□ -0.26
PKP3-208ENST00000531857 NEK7Q8TDX7 302 aa13.4□□□□□ -0.26
PKP3-208ENST00000531857 DLX4Q92988 240 aaPredicted RBP13.4□□□□□ -0.26
PKP3-208ENST00000531857 ZNF221Q9UK13 617 aa13.4□□□□□ -0.26
PKP3-208ENST00000531857 FAM90A10PA6NDY2 464 aa13.39□□□□□ -0.27
PKP3-208ENST00000531857 H2AFB2P0C5Z0 115 aa13.39□□□□□ -0.27
PKP3-208ENST00000531857 GP9P14770 177 aa13.39□□□□□ -0.27
PKP3-208ENST00000531857 RAB9AP51151 201 aa13.39□□□□□ -0.27
PKP3-208ENST00000531857 MECP2P51608 486 aaKnown RBP13.39□□□□□ -0.27
PKP3-208ENST00000531857 SLURP1P55000 103 aa13.39□□□□□ -0.27
PKP3-208ENST00000531857 MPV17LQ2QL34 196 aa13.39□□□□□ -0.27
PKP3-208ENST00000531857 ACTBL2Q562R1 376 aa13.39□□□□□ -0.27
PKP3-208ENST00000531857 LINC00596Q86U02 117 aa13.39□□□□□ -0.27
PKP3-208ENST00000531857 PRR18Q8N4B5 295 aa13.39□□□□□ -0.27
PKP3-208ENST00000531857 OR10R2Q8NGX6 335 aa13.39□□□□□ -0.27
PKP3-208ENST00000531857 OR4K15Q8NH41 348 aa13.39□□□□□ -0.27
PKP3-208ENST00000531857 OR1L1Q8NH94 360 aa13.39□□□□□ -0.27
PKP3-208ENST00000531857 CITED4Q96RK1 184 aa13.39□□□□□ -0.27
PKP3-208ENST00000531857 SLC25A21Q9BQT8 299 aaPredicted RBP13.39□□□□□ -0.27
PKP3-208ENST00000531857 TMEM59Q9BXS4 323 aa13.39□□□□□ -0.27
PKP3-208ENST00000531857 OR51J1Q9H342 316 aa13.39□□□□□ -0.27
PKP3-208ENST00000531857 GPN1Q9HCN4 374 aaPredicted RBP13.39□□□□□ -0.27
PKP3-208ENST00000531857 PARP11Q9NR21 331 aa13.39□□□□□ -0.27
PKP3-208ENST00000531857 GNG12Q9UBI6 72 aa13.39□□□□□ -0.27
PKP3-208ENST00000531857 IGHV7-81A0A0B4J1V7 117 aa13.38□□□□□ -0.27
PKP3-208ENST00000531857 TRAV41A0A0B4J266 112 aa13.38□□□□□ -0.27
PKP3-208ENST00000531857 RAB27BO00194 218 aa13.38□□□□□ -0.27
PKP3-208ENST00000531857 HBZP02008 142 aa13.38□□□□□ -0.27
PKP3-208ENST00000531857 IL5P05113 134 aa13.38□□□□□ -0.27
PKP3-208ENST00000531857 BTCP35070 178 aa13.38□□□□□ -0.27
PKP3-208ENST00000531857 RBMS2Q15434 407 aaKnown RBP13.38□□□□□ -0.27
PKP3-208ENST00000531857 FAM89BQ8N5H3 189 aa13.38□□□□□ -0.27
PKP3-208ENST00000531857 CYYR1Q96J86 154 aa13.38□□□□□ -0.27
PKP3-208ENST00000531857 TM2D1Q9BX74 207 aa13.38□□□□□ -0.27
PKP3-208ENST00000531857 ZMAT4Q9H898 229 aa13.38□□□□□ -0.27
PKP3-208ENST00000531857 MCUBQ9NWR8 336 aa13.38□□□□□ -0.27
PKP3-208ENST00000531857 KLK11Q9UBX7 282 aa13.38□□□□□ -0.27
PKP3-208ENST00000531857 SCP2D1Q9UJQ7 156 aa13.38□□□□□ -0.27
PKP3-208ENST00000531857 TRAPPC2LQ9UL33 140 aa13.38□□□□□ -0.27
PKP3-208ENST00000531857 SPINT2O43291 252 aa13.37□□□□□ -0.27
PKP3-208ENST00000531857 BLVRBP30043 206 aaPredicted RBP13.37□□□□□ -0.27
PKP3-208ENST00000531857 EIF2B2P49770 351 aaKnown RBP13.37□□□□□ -0.27
PKP3-208ENST00000531857 RRAS2P62070 204 aaPredicted RBP13.37□□□□□ -0.27
PKP3-208ENST00000531857 SLC22A6Q4U2R8 563 aa13.37□□□□□ -0.27
PKP3-208ENST00000531857 C5orf24Q7Z6I8 188 aa13.37□□□□□ -0.27
PKP3-208ENST00000531857 OR6F1Q8NGZ6 308 aa13.37□□□□□ -0.27
PKP3-208ENST00000531857 CASTOR1Q8WTX7 329 aa13.37□□□□□ -0.27
PKP3-208ENST00000531857 NUDT15Q9NV35 164 aa13.37□□□□□ -0.27
PKP3-208ENST00000531857 BIRC6Q9NR09 4857 aa13.36□□□□□ -0.27
PKP3-208ENST00000531857 SNRPGP15A8MWD9 76 aa13.36□□□□□ -0.27
PKP3-208ENST00000531857 DISC1C4P0D8 188 aa13.36□□□□□ -0.27
PKP3-208ENST00000531857 SOX15O60248 233 aa13.36□□□□□ -0.27
PKP3-208ENST00000531857 NDUFB6O95139 128 aa13.36□□□□□ -0.27
PKP3-208ENST00000531857 HLA-DRB1P01911 266 aa13.36□□□□□ -0.27
PKP3-208ENST00000531857 CD74P04233 296 aa13.36□□□□□ -0.27
PKP3-208ENST00000531857 GTF2F2P13984 249 aa13.36□□□□□ -0.27
PKP3-208ENST00000531857 RCC1P18754 421 aaPredicted RBP13.36□□□□□ -0.27
PKP3-208ENST00000531857 RPS27AP62979 156 aaKnown RBP13.36□□□□□ -0.27
PKP3-208ENST00000531857 GNMTQ14749 295 aa13.36□□□□□ -0.27
PKP3-208ENST00000531857 CDNFQ49AH0 187 aa13.36□□□□□ -0.27
PKP3-208ENST00000531857 STEAP1BQ6NZ63 245 aa13.36□□□□□ -0.27
PKP3-208ENST00000531857 ACSM6Q6P461 480 aa13.36□□□□□ -0.27
PKP3-208ENST00000531857 ODF3L1Q8IXM7 274 aa13.36□□□□□ -0.27
PKP3-208ENST00000531857 TCTE3Q8IZS6 198 aa13.36□□□□□ -0.27
PKP3-208ENST00000531857 ARPC1AQ92747 370 aa13.36□□□□□ -0.27
PKP3-208ENST00000531857 PRRT1Q99946 306 aa13.36□□□□□ -0.27
PKP3-208ENST00000531857 TM2D3Q9BRN9 247 aa13.36□□□□□ -0.27
PKP3-208ENST00000531857 MRPL20Q9BYC9 149 aaKnown RBP13.36□□□□□ -0.27
PKP3-208ENST00000531857 TOLLIPQ9H0E2 274 aa13.36□□□□□ -0.27
PKP3-208ENST00000531857 LPAR5Q9H1C0 372 aa13.36□□□□□ -0.27
PKP3-208ENST00000531857 MED28Q9H204 178 aa13.36□□□□□ -0.27
PKP3-208ENST00000531857 TPSG1Q9NRR2 321 aa13.36□□□□□ -0.27
PKP3-208ENST00000531857 RCC2Q9P258 522 aaKnown RBP13.36□□□□□ -0.27
PKP3-208ENST00000531857 FBXO7Q9Y3I1 522 aa13.36□□□□□ -0.27
PKP3-208ENST00000531857 ALG5Q9Y673 324 aa13.36□□□□□ -0.27
PKP3-208ENST00000531857 DNAH1Q9P2D7 4330 aa13.36□□□□□ -0.27
PKP3-208ENST00000531857 IGHV4OR15-8A0A075B7B6 117 aa13.35□□□□□ -0.27
PKP3-208ENST00000531857 A0A087WW49 117 aa13.35□□□□□ -0.27
PKP3-208ENST00000531857 MCRIP1C9JLW8 97 aa13.35□□□□□ -0.27
PKP3-208ENST00000531857 LINC01619G3V211 115 aa13.35□□□□□ -0.27
PKP3-208ENST00000531857 UNC119Q13432 240 aa13.35□□□□□ -0.27
PKP3-208ENST00000531857 SRSF7Q16629 238 aaKnown RBP eCLIP13.35□□□□□ -0.27
PKP3-208ENST00000531857 MORN2Q502X0 79 aa13.35□□□□□ -0.27
PKP3-208ENST00000531857 C19orf54Q5BKX5 351 aa13.35□□□□□ -0.27
PKP3-208ENST00000531857 ASB13Q8WXK3 278 aa13.35□□□□□ -0.27
PKP3-208ENST00000531857 RAB3CQ96E17 227 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms