RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 ZNF562Q6V9R5 426 aa6.74□□□□□ -1.33
USF1-210ENST00000531842 MOB1BQ7L9L4 216 aa6.74□□□□□ -1.33
USF1-210ENST00000531842 ZNF367Q7RTV3 350 aa6.74□□□□□ -1.33
USF1-210ENST00000531842 SVOPQ8N4V2 548 aa6.74□□□□□ -1.33
USF1-210ENST00000531842 FAM89BQ8N5H3 189 aa6.74□□□□□ -1.33
USF1-210ENST00000531842 GATAD1Q8WUU5 269 aa6.74□□□□□ -1.33
USF1-210ENST00000531842 WDR89Q96FK6 387 aaPredicted RBP6.74□□□□□ -1.33
USF1-210ENST00000531842 TSNAXQ99598 290 aaKnown RBP6.74□□□□□ -1.33
USF1-210ENST00000531842 RNF5Q99942 180 aa6.74□□□□□ -1.33
USF1-210ENST00000531842 URM1Q9BTM9 101 aaKnown RBP6.74□□□□□ -1.33
USF1-210ENST00000531842 C11orf54Q9H0W9 315 aaPredicted RBP6.74□□□□□ -1.33
USF1-210ENST00000531842 LPAR5Q9H1C0 372 aa6.74□□□□□ -1.33
USF1-210ENST00000531842 VCX3BQ9H321 246 aa6.74□□□□□ -1.33
USF1-210ENST00000531842 SLA2Q9H6Q3 261 aa6.74□□□□□ -1.33
USF1-210ENST00000531842 NDUFB11Q9NX14 153 aa6.74□□□□□ -1.33
USF1-210ENST00000531842 SIGLEC8Q9NYZ4 499 aa6.74□□□□□ -1.33
USF1-210ENST00000531842 ZNF221Q9UK13 617 aa6.74□□□□□ -1.33
USF1-210ENST00000531842 FAT2Q9NYQ8 4349 aa6.74□□□□□ -1.33
USF1-210ENST00000531842 DNAH2Q9P225 4427 aa6.73□□□□□ -1.33
USF1-210ENST00000531842 A0A0B4J203 849 aa6.73□□□□□ -1.33
USF1-210ENST00000531842 SLC17A2O00624 439 aa6.73□□□□□ -1.33
USF1-210ENST00000531842 SOCS1O15524 211 aa6.73□□□□□ -1.33
USF1-210ENST00000531842 PROP1O75360 226 aa6.73□□□□□ -1.33
USF1-210ENST00000531842 TPPPO94811 219 aa6.73□□□□□ -1.33
USF1-210ENST00000531842 NAPSAO96009 420 aa6.73□□□□□ -1.33
USF1-210ENST00000531842 HLA-AP01891 365 aaKnown RBP6.73□□□□□ -1.33
USF1-210ENST00000531842 APOA2P02652 100 aa6.73□□□□□ -1.33
USF1-210ENST00000531842 PRH1P02810 166 aa6.73□□□□□ -1.33
USF1-210ENST00000531842 IGKV1-16P04430 117 aa6.73□□□□□ -1.33
USF1-210ENST00000531842 ZP3P21754 424 aa6.73□□□□□ -1.33
USF1-210ENST00000531842 GABARAPL2P60520 117 aa6.73□□□□□ -1.33
USF1-210ENST00000531842 TNFRSF9Q07011 255 aa6.73□□□□□ -1.33
USF1-210ENST00000531842 FXYD3Q14802 87 aa6.73□□□□□ -1.33
USF1-210ENST00000531842 GUCA2BQ16661 112 aa6.73□□□□□ -1.33
USF1-210ENST00000531842 ZNF880Q6PDB4 577 aa6.73□□□□□ -1.33
USF1-210ENST00000531842 Q8N402 240 aa6.73□□□□□ -1.33
USF1-210ENST00000531842 POC5Q8NA72 575 aa6.73□□□□□ -1.33
USF1-210ENST00000531842 OR6M1Q8NGM8 313 aa6.73□□□□□ -1.33
USF1-210ENST00000531842 EDARADDQ8WWZ3 215 aa6.73□□□□□ -1.33
USF1-210ENST00000531842 CACNG8Q8WXS5 425 aa6.73□□□□□ -1.33
USF1-210ENST00000531842 HDHD3Q9BSH5 251 aaPredicted RBP6.73□□□□□ -1.33
USF1-210ENST00000531842 KRTAP4-5Q9BYR2 181 aa6.73□□□□□ -1.33
USF1-210ENST00000531842 PLGRKTQ9HBL7 147 aa6.73□□□□□ -1.33
USF1-210ENST00000531842 OR1A1Q9P1Q5 309 aa6.73□□□□□ -1.33
USF1-210ENST00000531842 AK3Q9UIJ7 227 aa6.73□□□□□ -1.33
USF1-210ENST00000531842 MGAT4AQ9UM21 535 aa6.73□□□□□ -1.33
USF1-210ENST00000531842 KCNK7Q9Y2U2 307 aa6.73□□□□□ -1.33
USF1-210ENST00000531842 RRP15Q9Y3B9 282 aaKnown RBP6.73□□□□□ -1.33
USF1-210ENST00000531842 A0A0G2JLM5 398 aa6.72□□□□□ -1.33
USF1-210ENST00000531842 TRDV1A0A1B0GX56 115 aa6.72□□□□□ -1.33
USF1-210ENST00000531842 M0R1X1 148 aa6.72□□□□□ -1.33
USF1-210ENST00000531842 BMPR1BO00238 502 aa6.72□□□□□ -1.33
USF1-210ENST00000531842 ITGB1BP1O14713 200 aa6.72□□□□□ -1.33
USF1-210ENST00000531842 BPNT1O95861 308 aa6.72□□□□□ -1.33
USF1-210ENST00000531842 SCTP09683 121 aa6.72□□□□□ -1.33
USF1-210ENST00000531842 CALRP27797 417 aaKnown RBP6.72□□□□□ -1.33
USF1-210ENST00000531842 HLA-DRB3P79483 266 aa6.72□□□□□ -1.33
USF1-210ENST00000531842 MRPS15P82914 257 aaKnown RBP6.72□□□□□ -1.33
USF1-210ENST00000531842 C2orf76Q3KRA6 126 aa6.72□□□□□ -1.33
USF1-210ENST00000531842 MOGAT2Q3SYC2 334 aa6.72□□□□□ -1.33
USF1-210ENST00000531842 PLAC9Q5JTB6 97 aa6.72□□□□□ -1.33
USF1-210ENST00000531842 CEMP1Q6PRD7 247 aaPredicted RBP6.72□□□□□ -1.33
USF1-210ENST00000531842 C19orf35Q6ZS72 473 aa6.72□□□□□ -1.33
USF1-210ENST00000531842 BVESQ8NE79 360 aa6.72□□□□□ -1.33
USF1-210ENST00000531842 OR5AN1Q8NGI8 311 aa6.72□□□□□ -1.33
USF1-210ENST00000531842 AGMATQ9BSE5 352 aa6.72□□□□□ -1.33
USF1-210ENST00000531842 RNF167Q9H6Y7 350 aa6.72□□□□□ -1.33
USF1-210ENST00000531842 C12orf4Q9NQ89 552 aa6.72□□□□□ -1.33
USF1-210ENST00000531842 PEF1Q9UBV8 284 aaKnown RBP6.72□□□□□ -1.33
USF1-210ENST00000531842 TRAV1-2A0A0B4J238 106 aa6.71□□□□□ -1.34
USF1-210ENST00000531842 IGKV1-6A0A0C4DH72 117 aa6.71□□□□□ -1.34
USF1-210ENST00000531842 TMEM272A0A1B0GTI8 110 aa6.71□□□□□ -1.34
USF1-210ENST00000531842 SMIM30A4D0T7 59 aa6.71□□□□□ -1.34
USF1-210ENST00000531842 PPP5D1E7EU14 171 aa6.71□□□□□ -1.34
USF1-210ENST00000531842 MRPS14O60783 128 aaKnown RBP6.71□□□□□ -1.34
USF1-210ENST00000531842 SPDEFO95238 335 aa6.71□□□□□ -1.34
USF1-210ENST00000531842 PSMA1P25786 263 aaKnown RBP6.71□□□□□ -1.34
USF1-210ENST00000531842 CBX3Q13185 183 aa6.71□□□□□ -1.34
USF1-210ENST00000531842 TRAM1Q15629 374 aa6.71□□□□□ -1.34
USF1-210ENST00000531842 RAB11BQ15907 218 aa6.71□□□□□ -1.34
USF1-210ENST00000531842 TATDN3Q17R31 274 aa6.71□□□□□ -1.34
USF1-210ENST00000531842 RPEL1Q2QD12 228 aa6.71□□□□□ -1.34
USF1-210ENST00000531842 HES5Q5TA89 166 aa6.71□□□□□ -1.34
USF1-210ENST00000531842 ZNF343Q6P1L6 599 aa6.71□□□□□ -1.34
USF1-210ENST00000531842 PDPNQ86YL7 162 aa6.71□□□□□ -1.34
USF1-210ENST00000531842 ZNF383Q8NA42 475 aa6.71□□□□□ -1.34
USF1-210ENST00000531842 FAM3DQ96BQ1 224 aa6.71□□□□□ -1.34
USF1-210ENST00000531842 CMSS1Q9BQ75 279 aaKnown RBP6.71□□□□□ -1.34
USF1-210ENST00000531842 Q9N2K0 584 aa6.71□□□□□ -1.34
USF1-210ENST00000531842 SLC35D1Q9NTN3 355 aa6.71□□□□□ -1.34
USF1-210ENST00000531842 COA4Q9NYJ1 87 aa6.71□□□□□ -1.34
USF1-210ENST00000531842 RDH8Q9NYR8 311 aa6.71□□□□□ -1.34
USF1-210ENST00000531842 DNAH17Q9UFH2 4485 aa6.7□□□□□ -1.34
USF1-210ENST00000531842 TRBV6-6A0A0A6YYG2 114 aa6.7□□□□□ -1.34
USF1-210ENST00000531842 IFITM5A6NNB3 132 aa6.7□□□□□ -1.34
USF1-210ENST00000531842 TRDCB7Z8K6 153 aa6.7□□□□□ -1.34
USF1-210ENST00000531842 H3BUA1 57 aa6.7□□□□□ -1.34
USF1-210ENST00000531842 ARL6IP5O75915 188 aa6.7□□□□□ -1.34
USF1-210ENST00000531842 IGHV3-23P01764 117 aa6.7□□□□□ -1.34
USF1-210ENST00000531842 LGALS7P47929 136 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms