RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 KIAA1456Q9P272 454 aa9.92□□□□□ -0.82
TM9SF1-211ENST00000531406 FBXO7Q9Y3I1 522 aa9.92□□□□□ -0.82
TM9SF1-211ENST00000531406 FOXI3A8MTJ6 420 aaPredicted RBP9.91□□□□□ -0.82
TM9SF1-211ENST00000531406 GABARAPH6UMI1 98 aa9.91□□□□□ -0.82
TM9SF1-211ENST00000531406 SULT1C2O00338 296 aa9.91□□□□□ -0.82
TM9SF1-211ENST00000531406 MFNGO00587 321 aa9.91□□□□□ -0.82
TM9SF1-211ENST00000531406 ST8SIA5O15466 376 aa9.91□□□□□ -0.82
TM9SF1-211ENST00000531406 SOX15O60248 233 aa9.91□□□□□ -0.82
TM9SF1-211ENST00000531406 EGR2P11161 476 aaPredicted RBP9.91□□□□□ -0.82
TM9SF1-211ENST00000531406 GNB3P16520 340 aa9.91□□□□□ -0.82
TM9SF1-211ENST00000531406 PRSS3P35030 304 aa9.91□□□□□ -0.82
TM9SF1-211ENST00000531406 CRIP2P52943 208 aaPredicted RBP9.91□□□□□ -0.82
TM9SF1-211ENST00000531406 CX3CL1P78423 397 aa9.91□□□□□ -0.82
TM9SF1-211ENST00000531406 CDNFQ49AH0 187 aa9.91□□□□□ -0.82
TM9SF1-211ENST00000531406 HACD4Q5VWC8 232 aa9.91□□□□□ -0.82
TM9SF1-211ENST00000531406 ZNF660Q6AZW8 331 aaPredicted RBP9.91□□□□□ -0.82
TM9SF1-211ENST00000531406 FAM71F2Q6NXP2 309 aa9.91□□□□□ -0.82
TM9SF1-211ENST00000531406 C6orf201Q7Z4U5 140 aa9.91□□□□□ -0.82
TM9SF1-211ENST00000531406 SMIM4Q8WVI0 70 aa9.91□□□□□ -0.82
TM9SF1-211ENST00000531406 FCAMRQ8WWV6 532 aa9.91□□□□□ -0.82
TM9SF1-211ENST00000531406 IL1F10Q8WWZ1 152 aa9.91□□□□□ -0.82
TM9SF1-211ENST00000531406 DLX4Q92988 240 aaPredicted RBP9.91□□□□□ -0.82
TM9SF1-211ENST00000531406 ARHGAP5-AS1Q96IT6 56 aa9.91□□□□□ -0.82
TM9SF1-211ENST00000531406 SOSTQ9BQB4 213 aa9.91□□□□□ -0.82
TM9SF1-211ENST00000531406 ALX4Q9H161 411 aaPredicted RBP9.91□□□□□ -0.82
TM9SF1-211ENST00000531406 FBXL15Q9H469 300 aa9.91□□□□□ -0.82
TM9SF1-211ENST00000531406 PALMDQ9NP74 551 aa9.91□□□□□ -0.82
TM9SF1-211ENST00000531406 FOXA2Q9Y261 457 aaPredicted RBP9.91□□□□□ -0.82
TM9SF1-211ENST00000531406 A0A1W2PN81 502 aa9.9□□□□□ -0.82
TM9SF1-211ENST00000531406 TMEM235A6NFC5 223 aa9.9□□□□□ -0.82
TM9SF1-211ENST00000531406 LINC01619G3V211 115 aa9.9□□□□□ -0.82
TM9SF1-211ENST00000531406 J3QRK9 145 aa9.9□□□□□ -0.82
TM9SF1-211ENST00000531406 FCN1O00602 326 aa9.9□□□□□ -0.82
TM9SF1-211ENST00000531406 RRHO14718 337 aa9.9□□□□□ -0.82
TM9SF1-211ENST00000531406 RAB29O14966 203 aa9.9□□□□□ -0.82
TM9SF1-211ENST00000531406 GSTZ1O43708 216 aaPredicted RBP9.9□□□□□ -0.82
TM9SF1-211ENST00000531406 SAP30O75446 220 aa9.9□□□□□ -0.82
TM9SF1-211ENST00000531406 NAPSAO96009 420 aa9.9□□□□□ -0.82
TM9SF1-211ENST00000531406 HLA-DQB1P01920 261 aa9.9□□□□□ -0.82
TM9SF1-211ENST00000531406 LGALS1P09382 135 aaKnown RBP9.9□□□□□ -0.82
TM9SF1-211ENST00000531406 CD3GP09693 182 aa9.9□□□□□ -0.82
TM9SF1-211ENST00000531406 CT45A6P0DMU7 189 aa9.9□□□□□ -0.82
TM9SF1-211ENST00000531406 CT45A5P0DMU8 189 aa9.9□□□□□ -0.82
TM9SF1-211ENST00000531406 CT45A7P0DMV0 189 aa9.9□□□□□ -0.82
TM9SF1-211ENST00000531406 CHRNA7P36544 502 aa9.9□□□□□ -0.82
TM9SF1-211ENST00000531406 CBX5P45973 191 aa9.9□□□□□ -0.82
TM9SF1-211ENST00000531406 SLURP1P55000 103 aa9.9□□□□□ -0.82
TM9SF1-211ENST00000531406 SSBP1Q04837 148 aaKnown RBP9.9□□□□□ -0.82
TM9SF1-211ENST00000531406 ECSCRQ19T08 205 aa9.9□□□□□ -0.82
TM9SF1-211ENST00000531406 RPL39P5Q59GN2 51 aa9.9□□□□□ -0.82
TM9SF1-211ENST00000531406 PLAC9Q5JTB6 97 aa9.9□□□□□ -0.82
TM9SF1-211ENST00000531406 ZNF880Q6PDB4 577 aa9.9□□□□□ -0.82
TM9SF1-211ENST00000531406 SBSPONQ8IVN8 264 aa9.9□□□□□ -0.82
TM9SF1-211ENST00000531406 CASTOR1Q8WTX7 329 aa9.9□□□□□ -0.82
TM9SF1-211ENST00000531406 ABHD1Q96SE0 405 aa9.9□□□□□ -0.82
TM9SF1-211ENST00000531406 TOLLIPQ9H0E2 274 aa9.9□□□□□ -0.82
TM9SF1-211ENST00000531406 PARP12Q9H0J9 701 aaKnown RBP9.9□□□□□ -0.82
TM9SF1-211ENST00000531406 CHMP1AQ9HD42 196 aaPredicted RBP9.9□□□□□ -0.82
TM9SF1-211ENST00000531406 IFT46Q9NQC8 304 aa9.9□□□□□ -0.82
TM9SF1-211ENST00000531406 TPSG1Q9NRR2 321 aa9.9□□□□□ -0.82
TM9SF1-211ENST00000531406 PIPOXQ9P0Z9 390 aa9.9□□□□□ -0.82
TM9SF1-211ENST00000531406 SLC23A1Q9UHI7 598 aa9.9□□□□□ -0.82
TM9SF1-211ENST00000531406 NUBP2Q9Y5Y2 271 aa9.9□□□□□ -0.82
TM9SF1-211ENST00000531406 H0YJW9 148 aa9.89□□□□□ -0.83
TM9SF1-211ENST00000531406 UPK1BO75841 260 aa9.89□□□□□ -0.83
TM9SF1-211ENST00000531406 SPNP16150 400 aa9.89□□□□□ -0.83
TM9SF1-211ENST00000531406 MC5RP33032 325 aa9.89□□□□□ -0.83
TM9SF1-211ENST00000531406 TMEM50BP56557 158 aa9.89□□□□□ -0.83
TM9SF1-211ENST00000531406 AP3S2P59780 193 aa9.89□□□□□ -0.83
TM9SF1-211ENST00000531406 PLGLAQ15195 96 aa9.89□□□□□ -0.83
TM9SF1-211ENST00000531406 RNASE12Q5GAN4 147 aaKnown RBP9.89□□□□□ -0.83
TM9SF1-211ENST00000531406 GLDNQ6ZMI3 551 aaPredicted RBP9.89□□□□□ -0.83
TM9SF1-211ENST00000531406 TCTEX1D1Q8N7M0 179 aa9.89□□□□□ -0.83
TM9SF1-211ENST00000531406 NUDCD2Q8WVJ2 157 aa9.89□□□□□ -0.83
TM9SF1-211ENST00000531406 CMSS1Q9BQ75 279 aaKnown RBP9.89□□□□□ -0.83
TM9SF1-211ENST00000531406 C12orf4Q9NQ89 552 aa9.89□□□□□ -0.83
TM9SF1-211ENST00000531406 IGHV4OR15-8A0A075B7B6 117 aa9.88□□□□□ -0.83
TM9SF1-211ENST00000531406 A0A087WW49 117 aa9.88□□□□□ -0.83
TM9SF1-211ENST00000531406 OR5H14A6NHG9 310 aa9.88□□□□□ -0.83
TM9SF1-211ENST00000531406 RBBP9O75884 186 aa9.88□□□□□ -0.83
TM9SF1-211ENST00000531406 GSTT2BP0CG30 244 aa9.88□□□□□ -0.83
TM9SF1-211ENST00000531406 IL7P13232 177 aa9.88□□□□□ -0.83
TM9SF1-211ENST00000531406 RCVRNP35243 200 aa9.88□□□□□ -0.83
TM9SF1-211ENST00000531406 DEFA1P59665 94 aa9.88□□□□□ -0.83
TM9SF1-211ENST00000531406 DEFA3P59666 94 aa9.88□□□□□ -0.83
TM9SF1-211ENST00000531406 TMEM267Q0VDI3 215 aaPredicted RBP9.88□□□□□ -0.83
TM9SF1-211ENST00000531406 ACSM6Q6P461 480 aa9.88□□□□□ -0.83
TM9SF1-211ENST00000531406 MOB1BQ7L9L4 216 aa9.88□□□□□ -0.83
TM9SF1-211ENST00000531406 OVCH2Q7RTZ1 564 aa9.88□□□□□ -0.83
TM9SF1-211ENST00000531406 PPP1R27Q86WC6 154 aa9.88□□□□□ -0.83
TM9SF1-211ENST00000531406 OR5AN1Q8NGI8 311 aa9.88□□□□□ -0.83
TM9SF1-211ENST00000531406 MUC7Q8TAX7 377 aa9.88□□□□□ -0.83
TM9SF1-211ENST00000531406 SETD6Q8TBK2 473 aa9.88□□□□□ -0.83
TM9SF1-211ENST00000531406 ABHD5Q8WTS1 349 aa9.88□□□□□ -0.83
TM9SF1-211ENST00000531406 ARPC1AQ92747 370 aa9.88□□□□□ -0.83
TM9SF1-211ENST00000531406 ABHD14BQ96IU4 210 aa9.88□□□□□ -0.83
TM9SF1-211ENST00000531406 RCHY1Q96PM5 261 aa9.88□□□□□ -0.83
TM9SF1-211ENST00000531406 AGMATQ9BSE5 352 aa9.88□□□□□ -0.83
TM9SF1-211ENST00000531406 THAP7Q9BT49 309 aaPredicted RBP9.88□□□□□ -0.83
TM9SF1-211ENST00000531406 RIMS4Q9H426 269 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms