RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 DEFB112Q30KQ8 113 aa15.33■□□□□ 0.04
SMPD1-205ENST00000531303 ANKRD55Q3KP44 614 aa15.33■□□□□ 0.04
SMPD1-205ENST00000531303 ZNF585BQ52M93 769 aa15.33■□□□□ 0.04
SMPD1-205ENST00000531303 Q6ZNX1 250 aa15.33■□□□□ 0.04
SMPD1-205ENST00000531303 CFHR4Q92496 578 aa15.33■□□□□ 0.04
SMPD1-205ENST00000531303 GALNT14Q96FL9 552 aa15.33■□□□□ 0.04
SMPD1-205ENST00000531303 TMEM222Q9H0R3 208 aa15.33■□□□□ 0.04
SMPD1-205ENST00000531303 IGKV1-16P04430 117 aa15.32■□□□□ 0.04
SMPD1-205ENST00000531303 MC5RP33032 325 aa15.32■□□□□ 0.04
SMPD1-205ENST00000531303 KIR2DS2P43631 304 aa15.32■□□□□ 0.04
SMPD1-205ENST00000531303 ARHGDIBP52566 201 aa15.32■□□□□ 0.04
SMPD1-205ENST00000531303 HES1Q14469 280 aa15.32■□□□□ 0.04
SMPD1-205ENST00000531303 CREBL2O60519 120 aaPredicted RBP15.31■□□□□ 0.04
SMPD1-205ENST00000531303 S1PR2O95136 353 aa15.31■□□□□ 0.04
SMPD1-205ENST00000531303 DUS4LO95620 317 aaKnown RBP15.31■□□□□ 0.04
SMPD1-205ENST00000531303 IGKV1D-33P01593 117 aa15.31■□□□□ 0.04
SMPD1-205ENST00000531303 IGKV1-33P01594 117 aa15.31■□□□□ 0.04
SMPD1-205ENST00000531303 SNRNP70P08621 437 aaKnown RBP15.31■□□□□ 0.04
SMPD1-205ENST00000531303 UCP1P25874 307 aa15.31■□□□□ 0.04
SMPD1-205ENST00000531303 BRS3P32247 399 aa15.31■□□□□ 0.04
SMPD1-205ENST00000531303 LIAT1Q6ZQX7 453 aa15.31■□□□□ 0.04
SMPD1-205ENST00000531303 ZNF695Q8IW36 515 aa15.31■□□□□ 0.04
SMPD1-205ENST00000531303 OR4S2Q8NH73 311 aa15.31■□□□□ 0.04
SMPD1-205ENST00000531303 LHFPL5Q8TAF8 219 aa15.31■□□□□ 0.04
SMPD1-205ENST00000531303 CD300LFQ8TDQ1 290 aa15.31■□□□□ 0.04
SMPD1-205ENST00000531303 ZDHHC16Q969W1 377 aa15.31■□□□□ 0.04
SMPD1-205ENST00000531303 FLYWCH2Q96CP2 140 aaKnown RBP15.31■□□□□ 0.04
SMPD1-205ENST00000531303 RITA1Q96K30 269 aa15.31■□□□□ 0.04
SMPD1-205ENST00000531303 SSX3Q99909 188 aa15.31■□□□□ 0.04
SMPD1-205ENST00000531303 OR51J1Q9H342 316 aa15.31■□□□□ 0.04
SMPD1-205ENST00000531303 MTORP42345 2549 aa15.3■□□□□ 0.04
SMPD1-205ENST00000531303 A0A1B0GVG6 124 aa15.3■□□□□ 0.04
SMPD1-205ENST00000531303 SSNA1O43805 119 aa15.3■□□□□ 0.04
SMPD1-205ENST00000531303 VENTXO95231 258 aa15.3■□□□□ 0.04
SMPD1-205ENST00000531303 RRASP10301 218 aa15.3■□□□□ 0.04
SMPD1-205ENST00000531303 CD1BP29016 333 aa15.3■□□□□ 0.04
SMPD1-205ENST00000531303 RPS16P62249 146 aaKnown RBP15.3■□□□□ 0.04
SMPD1-205ENST00000531303 TAGLNQ01995 201 aaKnown RBP15.3■□□□□ 0.04
SMPD1-205ENST00000531303 FBLN7Q53RD9 439 aa15.3■□□□□ 0.04
SMPD1-205ENST00000531303 TMEM268Q5VZI3 342 aa15.3■□□□□ 0.04
SMPD1-205ENST00000531303 PDPNQ86YL7 162 aa15.3■□□□□ 0.04
SMPD1-205ENST00000531303 SELENOHQ8IZQ5 122 aaKnown RBP15.3■□□□□ 0.04
SMPD1-205ENST00000531303 C12orf45Q8N5I9 185 aaPredicted RBP15.3■□□□□ 0.04
SMPD1-205ENST00000531303 COQ8AQ8NI60 647 aa15.3■□□□□ 0.04
SMPD1-205ENST00000531303 PHB2Q99623 299 aa15.3■□□□□ 0.04
SMPD1-205ENST00000531303 MEGF9Q9H1U4 602 aa15.3■□□□□ 0.04
SMPD1-205ENST00000531303 SNRPGP15A8MWD9 76 aa15.29■□□□□ 0.04
SMPD1-205ENST00000531303 SHOXO15266 292 aa15.29■□□□□ 0.04
SMPD1-205ENST00000531303 B3GALNT1O75752 331 aa15.29■□□□□ 0.04
SMPD1-205ENST00000531303 IGKV1-39P01597 117 aa15.29■□□□□ 0.04
SMPD1-205ENST00000531303 IGKV1D-39P04432 117 aa15.29■□□□□ 0.04
SMPD1-205ENST00000531303 C9orf139Q6ZV77 190 aa15.29■□□□□ 0.04
SMPD1-205ENST00000531303 VKORC1L1Q8N0U8 176 aa15.29■□□□□ 0.04
SMPD1-205ENST00000531303 LGI3Q8N145 548 aa15.29■□□□□ 0.04
SMPD1-205ENST00000531303 TCTEX1D1Q8N7M0 179 aa15.29■□□□□ 0.04
SMPD1-205ENST00000531303 MITD1Q8WV92 249 aa15.29■□□□□ 0.04
SMPD1-205ENST00000531303 TMEM160Q9NX00 188 aa15.29■□□□□ 0.04
SMPD1-205ENST00000531303 C7orf66A4D0T2 115 aa15.28■□□□□ 0.04
SMPD1-205ENST00000531303 INAFM1C9JVW0 142 aa15.28■□□□□ 0.04
SMPD1-205ENST00000531303 RBFOX2O43251 390 aaKnown RBP eCLIP15.28■□□□□ 0.04
SMPD1-205ENST00000531303 CDS2O95674 445 aa15.28■□□□□ 0.04
SMPD1-205ENST00000531303 HPRT1P00492 218 aa15.28■□□□□ 0.04
SMPD1-205ENST00000531303 KRASP01116 189 aa15.28■□□□□ 0.04
SMPD1-205ENST00000531303 G6PCP35575 357 aa15.28■□□□□ 0.04
SMPD1-205ENST00000531303 LRRC75BQ2VPJ9 315 aa15.28■□□□□ 0.04
SMPD1-205ENST00000531303 SSX9Q7RTT3 188 aa15.28■□□□□ 0.04
SMPD1-205ENST00000531303 HARBI1Q96MB7 349 aa15.28■□□□□ 0.04
SMPD1-205ENST00000531303 ZNF48Q96MX3 618 aaPredicted RBP15.28■□□□□ 0.04
SMPD1-205ENST00000531303 MAST4O15021 2626 aa15.27■□□□□ 0.04
SMPD1-205ENST00000531303 H3BUX3 64 aa15.27■□□□□ 0.04
SMPD1-205ENST00000531303 MOSP00540 346 aa15.27■□□□□ 0.04
SMPD1-205ENST00000531303 HOXB5P09067 269 aa15.27■□□□□ 0.04
SMPD1-205ENST00000531303 FAM106CPP0CH98 169 aa15.27■□□□□ 0.04
SMPD1-205ENST00000531303 CNTFRP26992 372 aa15.27■□□□□ 0.04
SMPD1-205ENST00000531303 SRPXP78539 464 aa15.27■□□□□ 0.04
SMPD1-205ENST00000531303 HABP2Q14520 560 aaPredicted RBP15.27■□□□□ 0.04
SMPD1-205ENST00000531303 LY6EQ16553 131 aa15.27■□□□□ 0.04
SMPD1-205ENST00000531303 DHRS7BQ6IAN0 325 aaPredicted RBP15.27■□□□□ 0.04
SMPD1-205ENST00000531303 LYZL2Q7Z4W2 148 aa15.27■□□□□ 0.04
SMPD1-205ENST00000531303 OR4C13Q8NGP0 309 aa15.27■□□□□ 0.04
SMPD1-205ENST00000531303 OR2T10Q8NGZ9 312 aa15.27■□□□□ 0.04
SMPD1-205ENST00000531303 RNASE11Q8TAA1 199 aaKnown RBP15.27■□□□□ 0.04
SMPD1-205ENST00000531303 RBPMSQ93062 196 aaKnown RBP15.27■□□□□ 0.04
SMPD1-205ENST00000531303 R3HDM4Q96D70 268 aa15.27■□□□□ 0.04
SMPD1-205ENST00000531303 EAF1Q96JC9 268 aaPredicted RBP15.27■□□□□ 0.04
SMPD1-205ENST00000531303 TMEM56Q96MV1 263 aa15.27■□□□□ 0.04
SMPD1-205ENST00000531303 PLEKHA2Q9HB19 425 aa15.27■□□□□ 0.04
SMPD1-205ENST00000531303 TNFRSF19Q9NS68 423 aa15.27■□□□□ 0.04
SMPD1-205ENST00000531303 TMEM56-RWDD3S4R434 201 aa15.27■□□□□ 0.04
SMPD1-205ENST00000531303 ANK3Q12955 4377 aaKnown RBP15.27■□□□□ 0.03
SMPD1-205ENST00000531303 SRRM4A7MD48 611 aaKnown RBP15.27■□□□□ 0.03
SMPD1-205ENST00000531303 ADAP1O75689 374 aa15.27■□□□□ 0.03
SMPD1-205ENST00000531303 TMEM11P17152 192 aa15.27■□□□□ 0.03
SMPD1-205ENST00000531303 SRD5A1P18405 259 aa15.27■□□□□ 0.03
SMPD1-205ENST00000531303 TMEM177Q53S58 311 aa15.27■□□□□ 0.03
SMPD1-205ENST00000531303 SIGLECL1Q8N7X8 197 aa15.27■□□□□ 0.03
SMPD1-205ENST00000531303 SLC35G3Q8N808 338 aa15.27■□□□□ 0.03
SMPD1-205ENST00000531303 DMBX1Q8NFW5 382 aa15.27■□□□□ 0.03
SMPD1-205ENST00000531303 FAM212BQ9NTI7 297 aaPredicted RBP15.27■□□□□ 0.03
SMPD1-205ENST00000531303 CDC42EP3Q9UKI2 254 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms