RNA–Protein interactions for RNA: ENST00000530724.1

TRIM3-210, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 651 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-210ENST00000530724 CDKN1AP38936 164 aa9.79□□□□□ -0.84
TRIM3-210ENST00000530724 REG1BP48304 166 aa9.79□□□□□ -0.84
TRIM3-210ENST00000530724 ATP5IP56385 69 aaPredicted RBP9.79□□□□□ -0.84
TRIM3-210ENST00000530724 BRWD1-AS2P59051 145 aa9.79□□□□□ -0.84
TRIM3-210ENST00000530724 RHOGP84095 191 aa9.79□□□□□ -0.84
TRIM3-210ENST00000530724 KLF5Q13887 457 aaPredicted RBP9.79□□□□□ -0.84
TRIM3-210ENST00000530724 IL11RAQ14626 422 aa9.79□□□□□ -0.84
TRIM3-210ENST00000530724 RTL8BQ17RB0 113 aa9.79□□□□□ -0.84
TRIM3-210ENST00000530724 SPATA46Q5T0L3 261 aa9.79□□□□□ -0.84
TRIM3-210ENST00000530724 FBXO46Q6PJ61 603 aaPredicted RBP9.79□□□□□ -0.84
TRIM3-210ENST00000530724 TMEM136Q6ZRR5 245 aa9.79□□□□□ -0.84
TRIM3-210ENST00000530724 BAGE3Q86Y29 109 aa9.79□□□□□ -0.84
TRIM3-210ENST00000530724 BAGE2Q86Y30 109 aa9.79□□□□□ -0.84
TRIM3-210ENST00000530724 OR2M7Q8NG81 312 aa9.79□□□□□ -0.84
TRIM3-210ENST00000530724 OR1L6Q8NGR2 347 aa9.79□□□□□ -0.84
TRIM3-210ENST00000530724 OR1K1Q8NGR3 316 aa9.79□□□□□ -0.84
TRIM3-210ENST00000530724 THOC3Q96J01 351 aaKnown RBP9.79□□□□□ -0.84
TRIM3-210ENST00000530724 EAF1Q96JC9 268 aaPredicted RBP9.79□□□□□ -0.84
TRIM3-210ENST00000530724 UHRF2Q96PU4 802 aa9.79□□□□□ -0.84
TRIM3-210ENST00000530724 ZNF552Q9H707 407 aaPredicted RBP9.79□□□□□ -0.84
TRIM3-210ENST00000530724 GNB4Q9HAV0 340 aa9.79□□□□□ -0.84
TRIM3-210ENST00000530724 PATZ1Q9HBE1 687 aaKnown RBP9.79□□□□□ -0.84
TRIM3-210ENST00000530724 NRN1Q9NPD7 142 aa9.79□□□□□ -0.84
TRIM3-210ENST00000530724 CRIM1Q9NZV1 1036 aa9.79□□□□□ -0.84
TRIM3-210ENST00000530724 PAM16Q9Y3D7 125 aa9.79□□□□□ -0.84
TRIM3-210ENST00000530724 COX11Q9Y6N1 276 aa9.79□□□□□ -0.84
TRIM3-210ENST00000530724 MYO7BQ6PIF6 2116 aa9.79□□□□□ -0.84
TRIM3-210ENST00000530724 SEC16AO15027 2179 aa9.78□□□□□ -0.84
TRIM3-210ENST00000530724 CHD9Q3L8U1 2897 aa9.78□□□□□ -0.84
TRIM3-210ENST00000530724 YLPM1P49750 1951 aaKnown RBP9.78□□□□□ -0.84
TRIM3-210ENST00000530724 A0A1B0GUS0 222 aa9.78□□□□□ -0.84
TRIM3-210ENST00000530724 A0A1W2PPV4 95 aa9.78□□□□□ -0.84
TRIM3-210ENST00000530724 TMEM30CPA0ZSE6 113 aa9.78□□□□□ -0.84
TRIM3-210ENST00000530724 J3QR06 171 aa9.78□□□□□ -0.84
TRIM3-210ENST00000530724 IFNL4K9M1U5 179 aa9.78□□□□□ -0.84
TRIM3-210ENST00000530724 FCN1O00602 326 aa9.78□□□□□ -0.84
TRIM3-210ENST00000530724 EN2P19622 333 aaPredicted RBP9.78□□□□□ -0.84
TRIM3-210ENST00000530724 CBLN1P23435 193 aa9.78□□□□□ -0.84
TRIM3-210ENST00000530724 VDAC2P45880 294 aaPredicted RBP9.78□□□□□ -0.84
TRIM3-210ENST00000530724 GFRA1P56159 465 aa9.78□□□□□ -0.84
TRIM3-210ENST00000530724 FOXL2P58012 376 aa9.78□□□□□ -0.84
TRIM3-210ENST00000530724 SELENOVP59797 346 aa9.78□□□□□ -0.84
TRIM3-210ENST00000530724 UBE2G2P60604 165 aa9.78□□□□□ -0.84
TRIM3-210ENST00000530724 SSPNQ14714 243 aa9.78□□□□□ -0.84
TRIM3-210ENST00000530724 GABRA6Q16445 453 aa9.78□□□□□ -0.84
TRIM3-210ENST00000530724 SPATA45Q537H7 98 aa9.78□□□□□ -0.84
TRIM3-210ENST00000530724 TRAT1Q6PIZ9 186 aa9.78□□□□□ -0.84
TRIM3-210ENST00000530724 Q6ZS52 159 aa9.78□□□□□ -0.84
TRIM3-210ENST00000530724 MMD2Q8IY49 270 aa9.78□□□□□ -0.84
TRIM3-210ENST00000530724 STPG4Q8N801 248 aa9.78□□□□□ -0.84
TRIM3-210ENST00000530724 OR10D3Q8NH80 312 aa9.78□□□□□ -0.84
TRIM3-210ENST00000530724 VN1R17PQ8TDU5 208 aa9.78□□□□□ -0.84
TRIM3-210ENST00000530724 C19orf24Q9BVV8 132 aa9.78□□□□□ -0.84
TRIM3-210ENST00000530724 GGTLC1Q9BX51 225 aa9.78□□□□□ -0.84
TRIM3-210ENST00000530724 SAMD10Q9BYL1 202 aa9.78□□□□□ -0.84
TRIM3-210ENST00000530724 COMMD5Q9GZQ3 224 aa9.78□□□□□ -0.84
TRIM3-210ENST00000530724 GP6Q9HCN6 339 aa9.78□□□□□ -0.84
TRIM3-210ENST00000530724 SLC35D1Q9NTN3 355 aa9.78□□□□□ -0.84
TRIM3-210ENST00000530724 CHD7Q9P2D1 2997 aa9.78□□□□□ -0.84
TRIM3-210ENST00000530724 RALGAPA1Q6GYQ0 2036 aa9.78□□□□□ -0.84
TRIM3-210ENST00000530724 PCDH15Q96QU1 1955 aa9.77□□□□□ -0.84
TRIM3-210ENST00000530724 ARID1BQ8NFD5 2236 aaPredicted RBP9.77□□□□□ -0.85
TRIM3-210ENST00000530724 TRAV30A0A087WSZ9 112 aa9.77□□□□□ -0.85
TRIM3-210ENST00000530724 IGHV5-10-1A0A0J9YXX1 117 aa9.77□□□□□ -0.85
TRIM3-210ENST00000530724 SMIM27A0A1W2PRY6 76 aa9.77□□□□□ -0.85
TRIM3-210ENST00000530724 A0A1W2PS18 150 aa9.77□□□□□ -0.85
TRIM3-210ENST00000530724 EPOPA6NHQ4 379 aa9.77□□□□□ -0.85
TRIM3-210ENST00000530724 K7EN84 100 aa9.77□□□□□ -0.85
TRIM3-210ENST00000530724 CXCL13O43927 109 aa9.77□□□□□ -0.85
TRIM3-210ENST00000530724 ZG16O60844 167 aa9.77□□□□□ -0.85
TRIM3-210ENST00000530724 OR2H2O95918 312 aa9.77□□□□□ -0.85
TRIM3-210ENST00000530724 PATE4P0C8F1 98 aa9.77□□□□□ -0.85
TRIM3-210ENST00000530724 RAC2P15153 192 aa9.77□□□□□ -0.85
TRIM3-210ENST00000530724 GCHFRP30047 84 aa9.77□□□□□ -0.85
TRIM3-210ENST00000530724 ARF1P84077 181 aaKnown RBP9.77□□□□□ -0.85
TRIM3-210ENST00000530724 PMP22Q01453 160 aa9.77□□□□□ -0.85
TRIM3-210ENST00000530724 PLGLB1Q02325 96 aa9.77□□□□□ -0.85
TRIM3-210ENST00000530724 TBR1Q16650 682 aa9.77□□□□□ -0.85
TRIM3-210ENST00000530724 CLEC12BQ2HXU8 276 aa9.77□□□□□ -0.85
TRIM3-210ENST00000530724 KRTCAP3Q53RY4 240 aa9.77□□□□□ -0.85
TRIM3-210ENST00000530724 FAM162BQ5T6X4 162 aa9.77□□□□□ -0.85
TRIM3-210ENST00000530724 TREML4Q6UXN2 200 aa9.77□□□□□ -0.85
TRIM3-210ENST00000530724 TCF23Q7RTU1 214 aa9.77□□□□□ -0.85
TRIM3-210ENST00000530724 NIT1Q86X76 327 aa9.77□□□□□ -0.85
TRIM3-210ENST00000530724 SCCPDHQ8NBX0 429 aa9.77□□□□□ -0.85
TRIM3-210ENST00000530724 ZNF738Q8NE65 137 aa9.77□□□□□ -0.85
TRIM3-210ENST00000530724 STARD4Q96DR4 205 aa9.77□□□□□ -0.85
TRIM3-210ENST00000530724 C5orf30Q96GV9 206 aa9.77□□□□□ -0.85
TRIM3-210ENST00000530724 DERL1Q9BUN8 251 aa9.77□□□□□ -0.85
TRIM3-210ENST00000530724 DUSP23Q9BVJ7 150 aa9.77□□□□□ -0.85
TRIM3-210ENST00000530724 RTL8AQ9BWD3 113 aa9.77□□□□□ -0.85
TRIM3-210ENST00000530724 TMEM167BQ9NRX6 74 aa9.77□□□□□ -0.85
TRIM3-210ENST00000530724 BET1LQ9NYM9 111 aa9.77□□□□□ -0.85
TRIM3-210ENST00000530724 CLN8Q9UBY8 286 aa9.77□□□□□ -0.85
TRIM3-210ENST00000530724 SCO2A0A1W2PP80 73 aa9.76□□□□□ -0.85
TRIM3-210ENST00000530724 A0A1W2PR80 420 aa9.76□□□□□ -0.85
TRIM3-210ENST00000530724 GRIFINA4D1Z8 144 aa9.76□□□□□ -0.85
TRIM3-210ENST00000530724 OOEPA6NGQ2 149 aa9.76□□□□□ -0.85
TRIM3-210ENST00000530724 SH2D1BO14796 132 aa9.76□□□□□ -0.85
TRIM3-210ENST00000530724 CCL25O15444 150 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms