RNA–Protein interactions for RNA: ENST00000530695.1

PKP3-207, Transcript of plakophilin 3, humanhuman

TSL 5

Gene PKP3, Length 441 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-207ENST00000530695 GINS4Q9BRT9 223 aa13.05□□□□□ -0.32
PKP3-207ENST00000530695 RSRP1Q9BUV0 290 aa13.05□□□□□ -0.32
PKP3-207ENST00000530695 BATF3Q9NR55 127 aa13.05□□□□□ -0.32
PKP3-207ENST00000530695 NDUFB11Q9NX14 153 aa13.05□□□□□ -0.32
PKP3-207ENST00000530695 BLOC1S6Q9UL45 172 aa13.05□□□□□ -0.32
PKP3-207ENST00000530695 STUB1Q9UNE7 303 aa13.05□□□□□ -0.32
PKP3-207ENST00000530695 A0A0B4J203 849 aa13.04□□□□□ -0.32
PKP3-207ENST00000530695 ANKRD34BA5PLL1 514 aa13.04□□□□□ -0.32
PKP3-207ENST00000530695 METTL21EPA6NDL7 271 aa13.04□□□□□ -0.32
PKP3-207ENST00000530695 RRASP10301 218 aa13.04□□□□□ -0.32
PKP3-207ENST00000530695 HIST1H1DP16402 221 aaKnown RBP13.04□□□□□ -0.32
PKP3-207ENST00000530695 RAB3BP20337 219 aa13.04□□□□□ -0.32
PKP3-207ENST00000530695 TALDO1P37837 337 aa13.04□□□□□ -0.32
PKP3-207ENST00000530695 ARFRP1Q13795 201 aa13.04□□□□□ -0.32
PKP3-207ENST00000530695 SRSF7Q16629 238 aaKnown RBP eCLIP13.04□□□□□ -0.32
PKP3-207ENST00000530695 KCTD21Q4G0X4 260 aa13.04□□□□□ -0.32
PKP3-207ENST00000530695 TMEM177Q53S58 311 aa13.04□□□□□ -0.32
PKP3-207ENST00000530695 HAPLN4Q86UW8 402 aa13.04□□□□□ -0.32
PKP3-207ENST00000530695 TMEM68Q96MH6 324 aa13.04□□□□□ -0.32
PKP3-207ENST00000530695 YTHDF1Q9BYJ9 559 aaKnown RBP13.04□□□□□ -0.32
PKP3-207ENST00000530695 SRRM4A7MD48 611 aaKnown RBP13.03□□□□□ -0.32
PKP3-207ENST00000530695 ANKRD13BQ86YJ7 626 aa13.03□□□□□ -0.32
PKP3-207ENST00000530695 PHB2Q99623 299 aa13.03□□□□□ -0.32
PKP3-207ENST00000530695 CENPOQ9BU64 300 aa13.03□□□□□ -0.32
PKP3-207ENST00000530695 TINAGL1Q9GZM7 467 aaPredicted RBP13.03□□□□□ -0.32
PKP3-207ENST00000530695 TRDV1A0A1B0GX56 115 aa13.02□□□□□ -0.33
PKP3-207ENST00000530695 IGLV1-51P01701 117 aa13.02□□□□□ -0.33
PKP3-207ENST00000530695 Q6ZS49 121 aa13.02□□□□□ -0.33
PKP3-207ENST00000530695 H1FOOQ8IZA3 346 aaPredicted RBP13.02□□□□□ -0.33
PKP3-207ENST00000530695 ADTRPQ96IZ2 230 aa13.02□□□□□ -0.33
PKP3-207ENST00000530695 MRPS26Q9BYN8 205 aaKnown RBP13.02□□□□□ -0.33
PKP3-207ENST00000530695 ATG5Q9H1Y0 275 aa13.02□□□□□ -0.33
PKP3-207ENST00000530695 ZMAT4Q9H898 229 aa13.02□□□□□ -0.33
PKP3-207ENST00000530695 COA4Q9NYJ1 87 aa13.02□□□□□ -0.33
PKP3-207ENST00000530695 IGKV1D-8A0A087WSZ0 117 aa13.01□□□□□ -0.33
PKP3-207ENST00000530695 BRI3O95415 125 aa13.01□□□□□ -0.33
PKP3-207ENST00000530695 CRYZL1O95825 349 aa13.01□□□□□ -0.33
PKP3-207ENST00000530695 APELAP0DMC3 54 aa13.01□□□□□ -0.33
PKP3-207ENST00000530695 AADACP22760 399 aa13.01□□□□□ -0.33
PKP3-207ENST00000530695 DUTP33316 252 aaKnown RBP13.01□□□□□ -0.33
PKP3-207ENST00000530695 DEFA5Q01523 94 aa13.01□□□□□ -0.33
PKP3-207ENST00000530695 KLF5Q13887 457 aaPredicted RBP13.01□□□□□ -0.33
PKP3-207ENST00000530695 MRGPRG-AS1Q2M3A8 158 aa13.01□□□□□ -0.33
PKP3-207ENST00000530695 VMA21Q3ZAQ7 101 aa13.01□□□□□ -0.33
PKP3-207ENST00000530695 C22orf42Q6IC83 251 aa13.01□□□□□ -0.33
PKP3-207ENST00000530695 NR2C2APQ86WQ0 139 aa13.01□□□□□ -0.33
PKP3-207ENST00000530695 TEX45Q8NA69 505 aa13.01□□□□□ -0.33
PKP3-207ENST00000530695 MUC7Q8TAX7 377 aa13.01□□□□□ -0.33
PKP3-207ENST00000530695 DDB2Q92466 427 aa13.01□□□□□ -0.33
PKP3-207ENST00000530695 DNAH7Q8WXX0 4024 aa13.01□□□□□ -0.33
PKP3-207ENST00000530695 SMIM30A4D0T7 59 aa13□□□□□ -0.33
PKP3-207ENST00000530695 MSGN1A6NI15 193 aa13□□□□□ -0.33
PKP3-207ENST00000530695 LINC00473A8K010 186 aa13□□□□□ -0.33
PKP3-207ENST00000530695 GALP22466 123 aa13□□□□□ -0.33
PKP3-207ENST00000530695 SYNJ2BPP57105 145 aa13□□□□□ -0.33
PKP3-207ENST00000530695 UBE2KP61086 200 aa13□□□□□ -0.33
PKP3-207ENST00000530695 ARL6IP1Q15041 203 aa13□□□□□ -0.33
PKP3-207ENST00000530695 TNXAQ16473 311 aa13□□□□□ -0.33
PKP3-207ENST00000530695 PRSS8Q16651 343 aa13□□□□□ -0.33
PKP3-207ENST00000530695 IDO2Q6ZQW0 420 aa13□□□□□ -0.33
PKP3-207ENST00000530695 Q8N1Y9 231 aa13□□□□□ -0.33
PKP3-207ENST00000530695 OR9G4Q8NGQ1 327 aa13□□□□□ -0.33
PKP3-207ENST00000530695 USMG5Q96IX5 58 aa13□□□□□ -0.33
PKP3-207ENST00000530695 PEF1Q9UBV8 284 aaKnown RBP13□□□□□ -0.33
PKP3-207ENST00000530695 ELF5Q9UKW6 265 aaPredicted RBP13□□□□□ -0.33
PKP3-207ENST00000530695 TENM2Q9NT68 2774 aa13□□□□□ -0.33
PKP3-207ENST00000530695 J3QRK9 145 aa12.99□□□□□ -0.33
PKP3-207ENST00000530695 IGHV4-30-4P0DP06 118 aa12.99□□□□□ -0.33
PKP3-207ENST00000530695 DTYMKP23919 212 aa12.99□□□□□ -0.33
PKP3-207ENST00000530695 GABARAPL2P60520 117 aa12.99□□□□□ -0.33
PKP3-207ENST00000530695 DYRK1AQ13627 763 aa12.99□□□□□ -0.33
PKP3-207ENST00000530695 CDNFQ49AH0 187 aa12.99□□□□□ -0.33
PKP3-207ENST00000530695 ZNF343Q6P1L6 599 aa12.99□□□□□ -0.33
PKP3-207ENST00000530695 SGPP2Q8IWX5 399 aa12.99□□□□□ -0.33
PKP3-207ENST00000530695 TSPAN14Q8NG11 270 aa12.99□□□□□ -0.33
PKP3-207ENST00000530695 OSR1Q8TAX0 266 aaPredicted RBP12.99□□□□□ -0.33
PKP3-207ENST00000530695 SRSF12Q8WXF0 261 aaKnown RBP12.99□□□□□ -0.33
PKP3-207ENST00000530695 ACOT12Q8WYK0 555 aa12.99□□□□□ -0.33
PKP3-207ENST00000530695 A0A087WXM4 84 aa12.98□□□□□ -0.33
PKP3-207ENST00000530695 MPPED1O15442 326 aa12.98□□□□□ -0.33
PKP3-207ENST00000530695 TRBV12-3P01733 135 aa12.98□□□□□ -0.33
PKP3-207ENST00000530695 OR9G9P0C7N8 305 aa12.98□□□□□ -0.33
PKP3-207ENST00000530695 CASC10Q5T4H9 136 aa12.98□□□□□ -0.33
PKP3-207ENST00000530695 IL34Q6ZMJ4 242 aa12.98□□□□□ -0.33
PKP3-207ENST00000530695 ADAD2Q8NCV1 583 aaKnown RBP12.98□□□□□ -0.33
PKP3-207ENST00000530695 ST6GALNAC5Q9BVH7 336 aa12.98□□□□□ -0.33
PKP3-207ENST00000530695 ADAM30Q9UKF2 790 aa12.98□□□□□ -0.33
PKP3-207ENST00000530695 RBMXL2O75526 392 aaKnown RBP12.97□□□□□ -0.33
PKP3-207ENST00000530695 SMIM18P0DKX4 95 aa12.97□□□□□ -0.33
PKP3-207ENST00000530695 TATDN3Q17R31 274 aa12.97□□□□□ -0.33
PKP3-207ENST00000530695 RPEL1Q2QD12 228 aa12.97□□□□□ -0.33
PKP3-207ENST00000530695 HACD4Q5VWC8 232 aa12.97□□□□□ -0.33
PKP3-207ENST00000530695 ZNF645Q8N7E2 425 aa12.97□□□□□ -0.33
PKP3-207ENST00000530695 TM2D3Q9BRN9 247 aa12.97□□□□□ -0.33
PKP3-207ENST00000530695 DCUN1D5Q9BTE7 237 aa12.97□□□□□ -0.33
PKP3-207ENST00000530695 ZNF430Q9H8G1 570 aaPredicted RBP12.97□□□□□ -0.33
PKP3-207ENST00000530695 VCX3AQ9NNX9 186 aa12.97□□□□□ -0.33
PKP3-207ENST00000530695 C19orf73Q9NVV2 129 aa12.97□□□□□ -0.33
PKP3-207ENST00000530695 OR2W1Q9Y3N9 320 aa12.97□□□□□ -0.33
PKP3-207ENST00000530695 NOTOA8MTQ0 251 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms