RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 IGKV1-6A0A0C4DH72 117 aa11.91□□□□□ -0.5
PCF11-204ENST00000530660 C9orf172C9J069 976 aa11.91□□□□□ -0.5
PCF11-204ENST00000530660 CLDN14O95500 239 aa11.91□□□□□ -0.5
PCF11-204ENST00000530660 IGKV1-5P01602 117 aa11.91□□□□□ -0.5
PCF11-204ENST00000530660 HHEXQ03014 270 aa11.91□□□□□ -0.5
PCF11-204ENST00000530660 TMEM196Q5HYL7 178 aa11.91□□□□□ -0.5
PCF11-204ENST00000530660 PHYHD1Q5SRE7 291 aa11.91□□□□□ -0.5
PCF11-204ENST00000530660 HLA-DQA1Q5Y7H0 255 aa11.91□□□□□ -0.5
PCF11-204ENST00000530660 WDR73Q6P4I2 378 aa11.91□□□□□ -0.5
PCF11-204ENST00000530660 C16orf47Q6ZP98 133 aaPredicted RBP11.91□□□□□ -0.5
PCF11-204ENST00000530660 TMEM136Q6ZRR5 245 aa11.91□□□□□ -0.5
PCF11-204ENST00000530660 SPSB1Q96BD6 273 aa11.91□□□□□ -0.5
PCF11-204ENST00000530660 ARL2-SNX15V9GYD0 113 aa11.91□□□□□ -0.5
PCF11-204ENST00000530660 FAM181BA6NEQ2 426 aa11.91□□□□□ -0.5
PCF11-204ENST00000530660 IGKV3-11P04433 115 aa11.91□□□□□ -0.5
PCF11-204ENST00000530660 AZU1P20160 251 aa11.91□□□□□ -0.5
PCF11-204ENST00000530660 DAZAP2Q15038 168 aaPredicted RBP11.91□□□□□ -0.5
PCF11-204ENST00000530660 MRPL54Q6P161 138 aaKnown RBP11.91□□□□□ -0.5
PCF11-204ENST00000530660 KCNIP2Q9NS61 270 aa11.91□□□□□ -0.5
PCF11-204ENST00000530660 PTPRSQ13332 1948 aa11.91□□□□□ -0.5
PCF11-204ENST00000530660 THADAQ6YHU6 1953 aa11.91□□□□□ -0.5
PCF11-204ENST00000530660 FAM231BA6NCW3 169 aa11.91□□□□□ -0.5
PCF11-204ENST00000530660 TNFP01375 233 aa11.91□□□□□ -0.5
PCF11-204ENST00000530660 ZNF16P17020 682 aaPredicted RBP11.91□□□□□ -0.5
PCF11-204ENST00000530660 UBALD2Q8IYN6 164 aa11.91□□□□□ -0.5
PCF11-204ENST00000530660 BORCS8Q96FH0 119 aa11.91□□□□□ -0.5
PCF11-204ENST00000530660 NPCDR1Q9BY65 106 aa11.91□□□□□ -0.5
PCF11-204ENST00000530660 F5P12259 2224 aa11.91□□□□□ -0.5
PCF11-204ENST00000530660 C2orf16Q68DN1 1984 aa11.9□□□□□ -0.5
PCF11-204ENST00000530660 REG1AP05451 166 aa11.9□□□□□ -0.5
PCF11-204ENST00000530660 RHOBP62745 196 aa11.9□□□□□ -0.5
PCF11-204ENST00000530660 GABRA6Q16445 453 aa11.9□□□□□ -0.5
PCF11-204ENST00000530660 NPVFQ9HCQ7 196 aa11.9□□□□□ -0.5
PCF11-204ENST00000530660 PEF1Q9UBV8 284 aaKnown RBP11.9□□□□□ -0.5
PCF11-204ENST00000530660 ATP23Q9Y6H3 246 aa11.9□□□□□ -0.5
PCF11-204ENST00000530660 PPIAL4EA0A075B759 164 aa11.9□□□□□ -0.5
PCF11-204ENST00000530660 PPIAL4CA0A0B4J2A2 164 aa11.9□□□□□ -0.5
PCF11-204ENST00000530660 BLACEA4D250 179 aa11.9□□□□□ -0.5
PCF11-204ENST00000530660 PPIAL4DF5H284 164 aa11.9□□□□□ -0.5
PCF11-204ENST00000530660 PPIAL4FP0DN26 164 aa11.9□□□□□ -0.5
PCF11-204ENST00000530660 KIR2DL1P43626 348 aaPredicted RBP11.9□□□□□ -0.5
PCF11-204ENST00000530660 TRIP6Q15654 476 aaKnown RBP11.9□□□□□ -0.5
PCF11-204ENST00000530660 Q6ZSR6 202 aa11.9□□□□□ -0.5
PCF11-204ENST00000530660 USF3Q68DE3 2245 aa11.9□□□□□ -0.51
PCF11-204ENST00000530660 A0A1W2PQD3 144 aa11.89□□□□□ -0.51
PCF11-204ENST00000530660 HAND1O96004 215 aa11.89□□□□□ -0.51
PCF11-204ENST00000530660 FOXE3Q13461 319 aa11.89□□□□□ -0.51
PCF11-204ENST00000530660 FXYD3Q14802 87 aa11.89□□□□□ -0.51
PCF11-204ENST00000530660 C7orf71A4D174 169 aa11.89□□□□□ -0.51
PCF11-204ENST00000530660 M0R2Z0 102 aa11.89□□□□□ -0.51
PCF11-204ENST00000530660 HSBP1O75506 76 aa11.89□□□□□ -0.51
PCF11-204ENST00000530660 GPR6P46095 362 aaPredicted RBP11.89□□□□□ -0.51
PCF11-204ENST00000530660 FBXW4P57775 412 aa11.89□□□□□ -0.51
PCF11-204ENST00000530660 UBE2G1P62253 170 aa11.89□□□□□ -0.51
PCF11-204ENST00000530660 SCGB2A2Q13296 93 aa11.89□□□□□ -0.51
PCF11-204ENST00000530660 OR8B8Q15620 311 aa11.89□□□□□ -0.51
PCF11-204ENST00000530660 SLC25A47Q6Q0C1 308 aa11.89□□□□□ -0.51
PCF11-204ENST00000530660 TCF24Q7RTU0 167 aa11.89□□□□□ -0.51
PCF11-204ENST00000530660 STPG3Q8N7X2 389 aa11.89□□□□□ -0.51
PCF11-204ENST00000530660 PPP1R3CQ9UQK1 317 aa11.89□□□□□ -0.51
PCF11-204ENST00000530660 TRAV9-1A0A075B6T8 112 aa11.89□□□□□ -0.51
PCF11-204ENST00000530660 LRP5LA4QPB2 252 aa11.89□□□□□ -0.51
PCF11-204ENST00000530660 LIPT2A6NK58 231 aa11.89□□□□□ -0.51
PCF11-204ENST00000530660 CD5LO43866 347 aa11.89□□□□□ -0.51
PCF11-204ENST00000530660 PRR31Q5SQ13 230 aa11.89□□□□□ -0.51
PCF11-204ENST00000530660 DCAF12Q5T6F0 453 aa11.89□□□□□ -0.51
PCF11-204ENST00000530660 OR1F12Q8NHA8 337 aa11.89□□□□□ -0.51
PCF11-204ENST00000530660 LMX1AQ8TE12 382 aa11.89□□□□□ -0.51
PCF11-204ENST00000530660 GPR27Q9NS67 375 aa11.89□□□□□ -0.51
PCF11-204ENST00000530660 TMEM150CB9EJG8 249 aa11.88□□□□□ -0.51
PCF11-204ENST00000530660 CTSSP25774 331 aa11.88□□□□□ -0.51
PCF11-204ENST00000530660 OR13H1Q8NG92 308 aa11.88□□□□□ -0.51
PCF11-204ENST00000530660 V9GYV3 84 aa11.88□□□□□ -0.51
PCF11-204ENST00000530660 OR4C46A6NHA9 309 aa11.88□□□□□ -0.51
PCF11-204ENST00000530660 C2orf70A6NJV1 201 aa11.88□□□□□ -0.51
PCF11-204ENST00000530660 M0R135 149 aa11.88□□□□□ -0.51
PCF11-204ENST00000530660 TUSC2O75896 110 aa11.88□□□□□ -0.51
PCF11-204ENST00000530660 MT-CO2P00403 227 aa11.88□□□□□ -0.51
PCF11-204ENST00000530660 CEACAM3P40198 252 aa11.88□□□□□ -0.51
PCF11-204ENST00000530660 RBM11P57052 281 aaKnown RBP11.88□□□□□ -0.51
PCF11-204ENST00000530660 TBR1Q16650 682 aa11.88□□□□□ -0.51
PCF11-204ENST00000530660 C12orf54Q6X4T0 127 aa11.88□□□□□ -0.51
PCF11-204ENST00000530660 OR8B3Q8NGG8 313 aa11.88□□□□□ -0.51
PCF11-204ENST00000530660 C18orf32Q8TCD1 76 aa11.88□□□□□ -0.51
PCF11-204ENST00000530660 ZNF799Q96GE5 643 aa11.88□□□□□ -0.51
PCF11-204ENST00000530660 OR8B2Q96RD0 313 aa11.88□□□□□ -0.51
PCF11-204ENST00000530660 RPP25Q9BUL9 199 aaKnown RBP11.88□□□□□ -0.51
PCF11-204ENST00000530660 SMPXQ9UHP9 88 aa11.88□□□□□ -0.51
PCF11-204ENST00000530660 LAMA1P25391 3075 aa11.88□□□□□ -0.51
PCF11-204ENST00000530660 TRBV9A0A0B4J1U6 114 aa11.88□□□□□ -0.51
PCF11-204ENST00000530660 A0A1B0GV72 72 aa11.88□□□□□ -0.51
PCF11-204ENST00000530660 A0A1W2PNR3 127 aa11.88□□□□□ -0.51
PCF11-204ENST00000530660 EFNA2O43921 213 aa11.88□□□□□ -0.51
PCF11-204ENST00000530660 RPL31P62899 125 aaKnown RBP11.88□□□□□ -0.51
PCF11-204ENST00000530660 ASPHD1Q5U4P2 390 aa11.88□□□□□ -0.51
PCF11-204ENST00000530660 UFSP1Q6NVU6 142 aa11.88□□□□□ -0.51
PCF11-204ENST00000530660 TMEM14EPQ6UXP3 125 aa11.88□□□□□ -0.51
PCF11-204ENST00000530660 SLC22A18ASQ8N1D0 253 aa11.88□□□□□ -0.51
PCF11-204ENST00000530660 CT55Q8WUE5 264 aa11.88□□□□□ -0.51
PCF11-204ENST00000530660 HES4Q9HCC6 221 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms