RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 C16orf92Q96LL3 132 aa7.31□□□□□ -1.24
CTNND1-221ENST00000529873 LDLRAD4O15165 306 aa7.31□□□□□ -1.24
CTNND1-221ENST00000529873 SS18L1O75177 396 aaPredicted RBP7.31□□□□□ -1.24
CTNND1-221ENST00000529873 GHRHP01286 108 aa7.31□□□□□ -1.24
CTNND1-221ENST00000529873 BCL2P10415 239 aa7.31□□□□□ -1.24
CTNND1-221ENST00000529873 NUBP1P53384 320 aa7.31□□□□□ -1.24
CTNND1-221ENST00000529873 IGLV3-21P80748 117 aaPredicted RBP7.31□□□□□ -1.24
CTNND1-221ENST00000529873 PCSK4Q6UW60 755 aa7.31□□□□□ -1.24
CTNND1-221ENST00000529873 ASCL4Q6XD76 172 aa7.31□□□□□ -1.24
CTNND1-221ENST00000529873 LRRC75AQ8NAA5 344 aa7.31□□□□□ -1.24
CTNND1-221ENST00000529873 OR4A5Q8NH83 315 aa7.31□□□□□ -1.24
CTNND1-221ENST00000529873 CCL19Q99731 98 aa7.31□□□□□ -1.24
CTNND1-221ENST00000529873 SCNM1Q9BWG6 230 aa7.31□□□□□ -1.24
CTNND1-221ENST00000529873 LHFPL6Q9Y693 200 aa7.31□□□□□ -1.24
CTNND1-221ENST00000529873 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.31□□□□□ -1.24
CTNND1-221ENST00000529873 HKR1P10072 659 aa7.31□□□□□ -1.24
CTNND1-221ENST00000529873 MPV17P39210 176 aa7.31□□□□□ -1.24
CTNND1-221ENST00000529873 NUTF2P61970 127 aaKnown RBP7.31□□□□□ -1.24
CTNND1-221ENST00000529873 CD300CQ08708 224 aa7.31□□□□□ -1.24
CTNND1-221ENST00000529873 LHFPL4Q7Z7J7 247 aa7.31□□□□□ -1.24
CTNND1-221ENST00000529873 FAM181AQ8N9Y4 354 aa7.31□□□□□ -1.24
CTNND1-221ENST00000529873 DNASE2BQ8WZ79 361 aa7.31□□□□□ -1.24
CTNND1-221ENST00000529873 OR5AC2Q9NZP5 309 aa7.31□□□□□ -1.24
CTNND1-221ENST00000529873 LIPFP07098 398 aa7.31□□□□□ -1.24
CTNND1-221ENST00000529873 ZNF880Q6PDB4 577 aa7.31□□□□□ -1.24
CTNND1-221ENST00000529873 PRELID3AQ96N28 172 aa7.31□□□□□ -1.24
CTNND1-221ENST00000529873 G6PC2Q9NQR9 355 aa7.31□□□□□ -1.24
CTNND1-221ENST00000529873 JKAMPQ9P055 326 aa7.31□□□□□ -1.24
CTNND1-221ENST00000529873 CROCCQ5TZA2 2017 aa7.31□□□□□ -1.24
CTNND1-221ENST00000529873 NDUFS6O75380 124 aaKnown RBP7.3□□□□□ -1.24
CTNND1-221ENST00000529873 HERPUD1Q15011 391 aa7.3□□□□□ -1.24
CTNND1-221ENST00000529873 ZNF506Q5JVG8 444 aa7.3□□□□□ -1.24
CTNND1-221ENST00000529873 TPRX1Q8N7U7 411 aa7.3□□□□□ -1.24
CTNND1-221ENST00000529873 GUCD1Q96NT3 240 aa7.3□□□□□ -1.24
CTNND1-221ENST00000529873 HSPB9Q9BQS6 159 aa7.3□□□□□ -1.24
CTNND1-221ENST00000529873 DERL1Q9BUN8 251 aa7.3□□□□□ -1.24
CTNND1-221ENST00000529873 JPT1Q9UK76 154 aa7.3□□□□□ -1.24
CTNND1-221ENST00000529873 TRAV30A0A087WSZ9 112 aa7.3□□□□□ -1.24
CTNND1-221ENST00000529873 SMIM13P0DJ93 91 aa7.3□□□□□ -1.24
CTNND1-221ENST00000529873 ZNF137PP52743 207 aa7.3□□□□□ -1.24
CTNND1-221ENST00000529873 RIPPLY3P57055 190 aa7.3□□□□□ -1.24
CTNND1-221ENST00000529873 TMEM78Q5T7P6 136 aa7.3□□□□□ -1.24
CTNND1-221ENST00000529873 CALYQ9NYX4 217 aa7.3□□□□□ -1.24
CTNND1-221ENST00000529873 PRSS2P07478 247 aa7.3□□□□□ -1.24
CTNND1-221ENST00000529873 CXCL2P19875 107 aa7.3□□□□□ -1.24
CTNND1-221ENST00000529873 RPL8P62917 257 aaKnown RBP7.3□□□□□ -1.24
CTNND1-221ENST00000529873 C1orf100Q5SVJ3 147 aa7.3□□□□□ -1.24
CTNND1-221ENST00000529873 HSF4Q9ULV5 492 aa7.3□□□□□ -1.24
CTNND1-221ENST00000529873 ARID2Q68CP9 1835 aa7.3□□□□□ -1.24
CTNND1-221ENST00000529873 ZNFX1Q9P2E3 1918 aaKnown RBP7.3□□□□□ -1.24
CTNND1-221ENST00000529873 A8MWL6 223 aa7.3□□□□□ -1.24
CTNND1-221ENST00000529873 MAS1LP35410 378 aa7.3□□□□□ -1.24
CTNND1-221ENST00000529873 PDLIM4P50479 330 aa7.3□□□□□ -1.24
CTNND1-221ENST00000529873 ATP5G2Q06055 141 aa7.3□□□□□ -1.24
CTNND1-221ENST00000529873 TMEM45BQ96B21 275 aa7.3□□□□□ -1.24
CTNND1-221ENST00000529873 RAXQ9Y2V3 346 aa7.3□□□□□ -1.24
CTNND1-221ENST00000529873 AUP1Q9Y679 476 aa7.3□□□□□ -1.24
CTNND1-221ENST00000529873 DLEU1O43261 78 aa7.29□□□□□ -1.24
CTNND1-221ENST00000529873 AMY1AP04745 511 aa7.29□□□□□ -1.24
CTNND1-221ENST00000529873 CDCP2Q5VXM1 449 aa7.29□□□□□ -1.24
CTNND1-221ENST00000529873 MMD2Q8IY49 270 aa7.29□□□□□ -1.24
CTNND1-221ENST00000529873 OR10S1Q8NGN2 331 aa7.29□□□□□ -1.24
CTNND1-221ENST00000529873 AMELYQ99218 206 aa7.29□□□□□ -1.24
CTNND1-221ENST00000529873 GPR132Q9UNW8 380 aa7.29□□□□□ -1.24
CTNND1-221ENST00000529873 HS3ST3B1Q9Y662 390 aa7.29□□□□□ -1.24
CTNND1-221ENST00000529873 TMSB15BA0A087X1C1 80 aa7.29□□□□□ -1.24
CTNND1-221ENST00000529873 LOC389332A0A1B0GUA5 103 aa7.29□□□□□ -1.24
CTNND1-221ENST00000529873 C7orf66A4D0T2 115 aa7.29□□□□□ -1.24
CTNND1-221ENST00000529873 C1QTNF9BB2RNN3 333 aa7.29□□□□□ -1.24
CTNND1-221ENST00000529873 ATXN7O15265 892 aaPredicted RBP7.29□□□□□ -1.24
CTNND1-221ENST00000529873 SVIPQ8NHG7 77 aa7.29□□□□□ -1.24
CTNND1-221ENST00000529873 CBLN4Q9NTU7 201 aa7.29□□□□□ -1.24
CTNND1-221ENST00000529873 RNF115Q9Y4L5 304 aa7.29□□□□□ -1.24
CTNND1-221ENST00000529873 FAM90A26D6RGX4 464 aa7.29□□□□□ -1.24
CTNND1-221ENST00000529873 KBTBD11O94819 623 aa7.29□□□□□ -1.24
CTNND1-221ENST00000529873 HLA-DRB1P01911 266 aa7.29□□□□□ -1.24
CTNND1-221ENST00000529873 DLL3Q9NYJ7 618 aa7.29□□□□□ -1.24
CTNND1-221ENST00000529873 PPIAL4CA0A0B4J2A2 164 aa7.29□□□□□ -1.24
CTNND1-221ENST00000529873 LOC101059948A0A1B0GTJ6 334 aa7.29□□□□□ -1.24
CTNND1-221ENST00000529873 ERVH48-1M5A8F1 160 aa7.29□□□□□ -1.24
CTNND1-221ENST00000529873 ZNHIT1O43257 154 aa7.29□□□□□ -1.24
CTNND1-221ENST00000529873 PPIAL4GP0DN37 164 aa7.29□□□□□ -1.24
CTNND1-221ENST00000529873 FOLR2P14207 255 aa7.29□□□□□ -1.24
CTNND1-221ENST00000529873 TM4SF20Q53R12 229 aa7.29□□□□□ -1.24
CTNND1-221ENST00000529873 DCAF12L2Q5VW00 463 aa7.29□□□□□ -1.24
CTNND1-221ENST00000529873 ZNF826PQ6ZT77 177 aa7.29□□□□□ -1.24
CTNND1-221ENST00000529873 STPG3Q8N7X2 389 aa7.29□□□□□ -1.24
CTNND1-221ENST00000529873 KLF14Q8TD94 323 aaPredicted RBP7.29□□□□□ -1.24
CTNND1-221ENST00000529873 IGKV1D-42A0A075B6H8 117 aa7.29□□□□□ -1.24
CTNND1-221ENST00000529873 LOC105371242A0A075B767 164 aa7.29□□□□□ -1.24
CTNND1-221ENST00000529873 GCM2O75603 506 aaPredicted RBP7.29□□□□□ -1.24
CTNND1-221ENST00000529873 HLA-DQA1P01909 254 aa7.29□□□□□ -1.24
CTNND1-221ENST00000529873 TYMSP04818 313 aa7.29□□□□□ -1.24
CTNND1-221ENST00000529873 C10orf128Q5T292 105 aa7.29□□□□□ -1.24
CTNND1-221ENST00000529873 WDR25Q64LD2 544 aaPredicted RBP7.29□□□□□ -1.24
CTNND1-221ENST00000529873 UNQ5815/PRO19632Q6UWF5 114 aa7.29□□□□□ -1.24
CTNND1-221ENST00000529873 GPR146Q96CH1 333 aa7.29□□□□□ -1.24
CTNND1-221ENST00000529873 EAF1Q96JC9 268 aaPredicted RBP7.29□□□□□ -1.24
CTNND1-221ENST00000529873 TXNDC17Q9BRA2 123 aa7.29□□□□□ -1.24
CTNND1-221ENST00000529873 LEPROTL1O95214 131 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms