RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 ZNF57Q68EA5 555 aaPredicted RBP6.74□□□□□ -1.33
VPS11-203ENST00000529545 WFDC3Q8IUB2 231 aa6.74□□□□□ -1.33
VPS11-203ENST00000529545 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.74□□□□□ -1.33
VPS11-203ENST00000529545 ADAD2Q8NCV1 583 aaKnown RBP6.74□□□□□ -1.33
VPS11-203ENST00000529545 PTX4Q96A99 478 aa6.74□□□□□ -1.33
VPS11-203ENST00000529545 HARBI1Q96MB7 349 aa6.74□□□□□ -1.33
VPS11-203ENST00000529545 SLC29A1Q99808 456 aa6.74□□□□□ -1.33
VPS11-203ENST00000529545 AKIP1Q9NQ31 210 aa6.74□□□□□ -1.33
VPS11-203ENST00000529545 PLEKHJ1Q9NW61 149 aa6.74□□□□□ -1.33
VPS11-203ENST00000529545 OR1A1Q9P1Q5 309 aa6.74□□□□□ -1.33
VPS11-203ENST00000529545 TP53TG1Q9Y2A0 90 aa6.74□□□□□ -1.33
VPS11-203ENST00000529545 DNAH10Q8IVF4 4471 aa6.74□□□□□ -1.33
VPS11-203ENST00000529545 TRBV5-7A0A0A0MS05 114 aa6.73□□□□□ -1.33
VPS11-203ENST00000529545 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.73□□□□□ -1.33
VPS11-203ENST00000529545 LGALS9O00182 355 aa6.73□□□□□ -1.33
VPS11-203ENST00000529545 GGCTO75223 188 aaKnown RBP6.73□□□□□ -1.33
VPS11-203ENST00000529545 PROP1O75360 226 aa6.73□□□□□ -1.33
VPS11-203ENST00000529545 CIB2O75838 187 aa6.73□□□□□ -1.33
VPS11-203ENST00000529545 ACTL6BO94805 426 aa6.73□□□□□ -1.33
VPS11-203ENST00000529545 IGLV2-23P01705 113 aa6.73□□□□□ -1.33
VPS11-203ENST00000529545 CRYGBP07316 175 aa6.73□□□□□ -1.33
VPS11-203ENST00000529545 RRASP10301 218 aa6.73□□□□□ -1.33
VPS11-203ENST00000529545 CBLN1P23435 193 aa6.73□□□□□ -1.33
VPS11-203ENST00000529545 LINC00205P59089 165 aa6.73□□□□□ -1.33
VPS11-203ENST00000529545 RPS11P62280 158 aaKnown RBP eCLIP6.73□□□□□ -1.33
VPS11-203ENST00000529545 RPS27AP62979 156 aaKnown RBP6.73□□□□□ -1.33
VPS11-203ENST00000529545 HLA-DRB3P79483 266 aa6.73□□□□□ -1.33
VPS11-203ENST00000529545 TNXAQ16473 311 aa6.73□□□□□ -1.33
VPS11-203ENST00000529545 RTL8BQ17RB0 113 aa6.73□□□□□ -1.33
VPS11-203ENST00000529545 VMA21Q3ZAQ7 101 aa6.73□□□□□ -1.33
VPS11-203ENST00000529545 ZNF880Q6PDB4 577 aa6.73□□□□□ -1.33
VPS11-203ENST00000529545 Q6ZWC4 215 aa6.73□□□□□ -1.33
VPS11-203ENST00000529545 NECAP1Q8NC96 275 aa6.73□□□□□ -1.33
VPS11-203ENST00000529545 KCNG3Q8TAE7 436 aa6.73□□□□□ -1.33
VPS11-203ENST00000529545 ACOT12Q8WYK0 555 aa6.73□□□□□ -1.33
VPS11-203ENST00000529545 CYYR1Q96J86 154 aa6.73□□□□□ -1.33
VPS11-203ENST00000529545 TMEM59Q9BXS4 323 aa6.73□□□□□ -1.33
VPS11-203ENST00000529545 ZNF230Q9UIE0 474 aaPredicted RBP6.73□□□□□ -1.33
VPS11-203ENST00000529545 FRAS1Q86XX4 4008 aa6.73□□□□□ -1.33
VPS11-203ENST00000529545 LOC100130705A0A1B0GUX0 176 aa6.72□□□□□ -1.33
VPS11-203ENST00000529545 ZNF320A2RRD8 509 aa6.72□□□□□ -1.33
VPS11-203ENST00000529545 UBE2CO00762 179 aa6.72□□□□□ -1.33
VPS11-203ENST00000529545 CREBL2O60519 120 aaPredicted RBP6.72□□□□□ -1.33
VPS11-203ENST00000529545 RBMXL2O75526 392 aaKnown RBP6.72□□□□□ -1.33
VPS11-203ENST00000529545 OR2C1O95371 312 aa6.72□□□□□ -1.33
VPS11-203ENST00000529545 PRH1P02810 166 aa6.72□□□□□ -1.33
VPS11-203ENST00000529545 MAPK3P27361 379 aaPredicted RBP6.72□□□□□ -1.33
VPS11-203ENST00000529545 TAS2R43P59537 309 aa6.72□□□□□ -1.33
VPS11-203ENST00000529545 TPBGQ13641 420 aa6.72□□□□□ -1.33
VPS11-203ENST00000529545 FAM106AQ4KMX7 169 aa6.72□□□□□ -1.33
VPS11-203ENST00000529545 TTC23Q5W5X9 447 aa6.72□□□□□ -1.33
VPS11-203ENST00000529545 OR10K2Q6IF99 312 aa6.72□□□□□ -1.33
VPS11-203ENST00000529545 SLC38A6Q8IZM9 456 aa6.72□□□□□ -1.33
VPS11-203ENST00000529545 TMEM61Q8N0U2 210 aa6.72□□□□□ -1.33
VPS11-203ENST00000529545 CBR4Q8N4T8 237 aa6.72□□□□□ -1.33
VPS11-203ENST00000529545 ZFP41Q8N8Y5 198 aa6.72□□□□□ -1.33
VPS11-203ENST00000529545 TEX45Q8NA69 505 aa6.72□□□□□ -1.33
VPS11-203ENST00000529545 PHLDA1Q8WV24 401 aaPredicted RBP6.72□□□□□ -1.33
VPS11-203ENST00000529545 SRSF12Q8WXF0 261 aaKnown RBP6.72□□□□□ -1.33
VPS11-203ENST00000529545 DERL3Q96Q80 235 aa6.72□□□□□ -1.33
VPS11-203ENST00000529545 SPIN2AQ99865 258 aa6.72□□□□□ -1.33
VPS11-203ENST00000529545 SPIN2BQ9BPZ2 258 aa6.72□□□□□ -1.33
VPS11-203ENST00000529545 TRBV6-6A0A0A6YYG2 114 aa6.71□□□□□ -1.34
VPS11-203ENST00000529545 TRBV9A0A0B4J1U6 114 aa6.71□□□□□ -1.34
VPS11-203ENST00000529545 PNMA8CA0A1B0GUJ8 204 aa6.71□□□□□ -1.34
VPS11-203ENST00000529545 PPP5D1E7EU14 171 aa6.71□□□□□ -1.34
VPS11-203ENST00000529545 OR2J3O76001 311 aa6.71□□□□□ -1.34
VPS11-203ENST00000529545 SCAF4O95104 1147 aaKnown RBP6.71□□□□□ -1.34
VPS11-203ENST00000529545 LALBAP00709 142 aa6.71□□□□□ -1.34
VPS11-203ENST00000529545 SCTP09683 121 aa6.71□□□□□ -1.34
VPS11-203ENST00000529545 HTR2CP28335 458 aa6.71□□□□□ -1.34
VPS11-203ENST00000529545 SERPINB10P48595 397 aa6.71□□□□□ -1.34
VPS11-203ENST00000529545 UBE2KP61086 200 aa6.71□□□□□ -1.34
VPS11-203ENST00000529545 EWSR1Q01844 656 aaKnown RBP eCLIP6.71□□□□□ -1.34
VPS11-203ENST00000529545 PRSS8Q16651 343 aa6.71□□□□□ -1.34
VPS11-203ENST00000529545 DEFB135Q30KP9 77 aa6.71□□□□□ -1.34
VPS11-203ENST00000529545 C15orf32Q32M92 178 aa6.71□□□□□ -1.34
VPS11-203ENST00000529545 TM4SF20Q53R12 229 aa6.71□□□□□ -1.34
VPS11-203ENST00000529545 TMEM177Q53S58 311 aa6.71□□□□□ -1.34
VPS11-203ENST00000529545 OR4A47Q6IF82 309 aa6.71□□□□□ -1.34
VPS11-203ENST00000529545 RBPMS2Q6ZRY4 209 aaKnown RBP6.71□□□□□ -1.34
VPS11-203ENST00000529545 SLC25A42Q86VD7 318 aa6.71□□□□□ -1.34
VPS11-203ENST00000529545 GPHB5Q86YW7 130 aa6.71□□□□□ -1.34
VPS11-203ENST00000529545 KRTAP19-1Q8IUB9 90 aa6.71□□□□□ -1.34
VPS11-203ENST00000529545 STPG3Q8N7X2 389 aa6.71□□□□□ -1.34
VPS11-203ENST00000529545 UXS1Q8NBZ7 420 aa6.71□□□□□ -1.34
VPS11-203ENST00000529545 PYDC1Q8WXC3 89 aa6.71□□□□□ -1.34
VPS11-203ENST00000529545 GGHQ92820 318 aa6.71□□□□□ -1.34
VPS11-203ENST00000529545 PGLYRP3Q96LB9 341 aa6.71□□□□□ -1.34
VPS11-203ENST00000529545 URM1Q9BTM9 101 aaKnown RBP6.71□□□□□ -1.34
VPS11-203ENST00000529545 C9orf16Q9BUW7 83 aa6.71□□□□□ -1.34
VPS11-203ENST00000529545 TM2D1Q9BX74 207 aa6.71□□□□□ -1.34
VPS11-203ENST00000529545 C12orf4Q9NQ89 552 aa6.71□□□□□ -1.34
VPS11-203ENST00000529545 RDH8Q9NYR8 311 aa6.71□□□□□ -1.34
VPS11-203ENST00000529545 DIMT1Q9UNQ2 313 aaKnown RBP6.71□□□□□ -1.34
VPS11-203ENST00000529545 RBM7Q9Y580 266 aaKnown RBP6.71□□□□□ -1.34
VPS11-203ENST00000529545 SELENOKQ9Y6D0 94 aa6.71□□□□□ -1.34
VPS11-203ENST00000529545 KIAA1109Q2LD37 5005 aa6.71□□□□□ -1.34
VPS11-203ENST00000529545 TRAV25A0A0B4J276 109 aa6.7□□□□□ -1.34
VPS11-203ENST00000529545 DPPA5A6NC42 116 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms