RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 KDM4DQ6B0I6 523 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 FAM183BPQ6ZVS7 135 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 MBOAT2Q6ZWT7 520 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 SLC30A8Q8IWU4 369 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 TMEM256Q8N2U0 113 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 ZNF645Q8N7E2 425 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 YIPF7Q8N8F6 280 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 ZNF439Q8NDP4 499 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 SLC30A7Q8NEW0 376 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 OR52E4Q8NGH9 312 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 OR5A2Q8NGI9 324 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 OR52E2Q8NGJ4 325 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 OR9I1Q8NGQ6 314 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 OR13C8Q8NGS7 320 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 OR13G1Q8NGZ3 307 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 OR13C6PQ8NH95 151 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 RNASEH2CQ8TDP1 164 aaKnown RBP2.28□□□□□ -2.04
CTR9-204ENST00000529355 ZNF431Q8TF32 576 aaPredicted RBP2.28□□□□□ -2.04
CTR9-204ENST00000529355 CANT1Q8WVQ1 401 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 HSD17B10Q99714 261 aaKnown RBP2.28□□□□□ -2.04
CTR9-204ENST00000529355 SIGMAR1Q99720 223 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 C20orf144Q9BQM9 153 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 LXNQ9BS40 222 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 SUCNR1Q9BXA5 334 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 ACTR3CQ9C0K3 210 aaPredicted RBP2.28□□□□□ -2.04
CTR9-204ENST00000529355 ARL6Q9H0F7 186 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 ABCG5Q9H222 651 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 CST9LQ9H4G1 147 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 TUBA4BQ9H853 241 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 TMEM27Q9HBJ8 222 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 LYRM2Q9NU23 88 aaPredicted RBP2.28□□□□□ -2.04
CTR9-204ENST00000529355 MED29Q9NX70 200 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 ZNF230Q9UIE0 474 aaPredicted RBP2.28□□□□□ -2.04
CTR9-204ENST00000529355 CARHSP1Q9Y2V2 147 aaKnown RBP2.28□□□□□ -2.04
CTR9-204ENST00000529355 V9GYY9 64 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 CHD3Q12873 2000 aaKnown RBP2.28□□□□□ -2.04
CTR9-204ENST00000529355 CACNA1SQ13698 1873 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 ABCA3Q99758 1704 aa2.28□□□□□ -2.05
CTR9-204ENST00000529355 WIZO95785 1651 aa2.28□□□□□ -2.05
CTR9-204ENST00000529355 MADDQ8WXG6 1647 aa2.28□□□□□ -2.05
CTR9-204ENST00000529355 UGGT1Q9NYU2 1555 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 MAST1Q9Y2H9 1570 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 RALGAPBQ86X10 1494 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 MYO5AQ9Y4I1 1855 aaKnown RBP2.27□□□□□ -2.05
CTR9-204ENST00000529355 BORCS7-ASMTA0A0B4J1R7 106 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 A0A0J9YXV3 536 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 A0A1W2PRF3 423 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 A0A1W2PRM7 423 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 SMIM9A6NGZ8 99 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 NDUFC2-KCTD14E9PQ53 114 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 F5H768 121 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 J3QR89 54 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 M0R233 179 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 CORTO00230 105 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 MYL12BO14950 172 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 ERI3O43414 337 aaKnown RBP2.27□□□□□ -2.05
CTR9-204ENST00000529355 OR2T1O43869 369 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 CHST1O43916 411 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 OR7C2O60412 319 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 SLC19A2O60779 497 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 DBIP07108 87 aaKnown RBP2.27□□□□□ -2.05
CTR9-204ENST00000529355 RHOCP08134 193 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 HIST1H1EP10412 219 aaKnown RBP2.27□□□□□ -2.05
CTR9-204ENST00000529355 ERGP11308 486 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 CD79AP11912 226 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 ZNF35P13682 527 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 MYL12AP19105 171 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 USF1P22415 310 aaPredicted RBP2.27□□□□□ -2.05
CTR9-204ENST00000529355 PSMA1P25786 263 aaKnown RBP2.27□□□□□ -2.05
CTR9-204ENST00000529355 SULT1A1P50225 295 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 SULT1A2P50226 295 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 GFERP55789 205 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 CTBP2P56545 445 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 OR10A3P58181 314 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 RPL23P62829 140 aaKnown RBP2.27□□□□□ -2.05
CTR9-204ENST00000529355 IFITM3Q01628 133 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 SKP2Q13309 424 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 HTR4Q13639 388 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 TPBGQ13641 420 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 JOSD1Q15040 202 aaPredicted RBP2.27□□□□□ -2.05
CTR9-204ENST00000529355 EBPQ15125 230 aaKnown RBP2.27□□□□□ -2.05
CTR9-204ENST00000529355 PMVKQ15126 192 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 HMGN3Q15651 99 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 LTC4SQ16873 150 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 MORN2Q502X0 79 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 TMEM97Q5BJF2 176 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 MESTQ5EB52 335 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 FAM74A1Q5RGS3 127 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 LAMTOR1Q6IAA8 161 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 C22orf42Q6IC83 251 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 KRTAP5-7Q6L8G8 165 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 ZNF773Q6PK81 442 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 UNQ9165/PRO28630Q6UXU0 137 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 ZNF720Q7Z2F6 126 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 OR2W3Q7Z3T1 314 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 MRPL55Q7Z7F7 128 aaKnown RBP2.27□□□□□ -2.05
CTR9-204ENST00000529355 DOLPP1Q86YN1 238 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 CBLN2Q8IUK8 224 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 CBR4Q8N4T8 237 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 JAGN1Q8N5M9 183 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms