RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 SPAG16Q8N0X2 631 aa6.39□□□□□ -1.39
SSBP3-211ENST00000528787 LGI3Q8N145 548 aa6.39□□□□□ -1.39
SSBP3-211ENST00000528787 SIGLECL1Q8N7X8 197 aa6.39□□□□□ -1.39
SSBP3-211ENST00000528787 TEX45Q8NA69 505 aa6.39□□□□□ -1.39
SSBP3-211ENST00000528787 DUSP18Q8NEJ0 188 aa6.39□□□□□ -1.39
SSBP3-211ENST00000528787 OR4D10Q8NGI6 311 aa6.39□□□□□ -1.39
SSBP3-211ENST00000528787 COQ8AQ8NI60 647 aa6.39□□□□□ -1.39
SSBP3-211ENST00000528787 RNASE11Q8TAA1 199 aaKnown RBP6.39□□□□□ -1.39
SSBP3-211ENST00000528787 RRNAD1Q96FB5 475 aaKnown RBP6.39□□□□□ -1.39
SSBP3-211ENST00000528787 GALNT14Q96FL9 552 aa6.39□□□□□ -1.39
SSBP3-211ENST00000528787 HARBI1Q96MB7 349 aa6.39□□□□□ -1.39
SSBP3-211ENST00000528787 RBM14Q96PK6 669 aaKnown RBP6.39□□□□□ -1.39
SSBP3-211ENST00000528787 PHB2Q99623 299 aa6.39□□□□□ -1.39
SSBP3-211ENST00000528787 RASL11BQ9BPW5 248 aa6.39□□□□□ -1.39
SSBP3-211ENST00000528787 MRPL20Q9BYC9 149 aaKnown RBP6.39□□□□□ -1.39
SSBP3-211ENST00000528787 PRSS22Q9GZN4 317 aa6.39□□□□□ -1.39
SSBP3-211ENST00000528787 FXYD6Q9H0Q3 95 aa6.39□□□□□ -1.39
SSBP3-211ENST00000528787 NAA60Q9H7X0 242 aa6.39□□□□□ -1.39
SSBP3-211ENST00000528787 IGKV1D-13A0A0B4J2D9 117 aa6.38□□□□□ -1.39
SSBP3-211ENST00000528787 LINC00854A0A1B0GVQ3 168 aa6.38□□□□□ -1.39
SSBP3-211ENST00000528787 CRYM-AS1A6NIL9 109 aa6.38□□□□□ -1.39
SSBP3-211ENST00000528787 NCBP2LA6PVI3 153 aaKnown RBP6.38□□□□□ -1.39
SSBP3-211ENST00000528787 J3QRK9 145 aa6.38□□□□□ -1.39
SSBP3-211ENST00000528787 NBR2O15453 112 aa6.38□□□□□ -1.39
SSBP3-211ENST00000528787 HOXA3O43365 443 aaPredicted RBP6.38□□□□□ -1.39
SSBP3-211ENST00000528787 PEX14O75381 377 aa6.38□□□□□ -1.39
SSBP3-211ENST00000528787 SNAPC5O75971 98 aa6.38□□□□□ -1.39
SSBP3-211ENST00000528787 VENTXO95231 258 aa6.38□□□□□ -1.39
SSBP3-211ENST00000528787 IFNA21P01568 189 aa6.38□□□□□ -1.39
SSBP3-211ENST00000528787 IGKV1-13P0DP09 117 aa6.38□□□□□ -1.39
SSBP3-211ENST00000528787 AKR1C4P17516 323 aa6.38□□□□□ -1.39
SSBP3-211ENST00000528787 MAS1LP35410 378 aa6.38□□□□□ -1.39
SSBP3-211ENST00000528787 REG1BP48304 166 aa6.38□□□□□ -1.39
SSBP3-211ENST00000528787 TRIM16LQ309B1 348 aa6.38□□□□□ -1.39
SSBP3-211ENST00000528787 C4orf46Q504U0 113 aa6.38□□□□□ -1.39
SSBP3-211ENST00000528787 PHLDA2Q53GA4 152 aa6.38□□□□□ -1.39
SSBP3-211ENST00000528787 ARSJQ5FYB0 599 aaPredicted RBP6.38□□□□□ -1.39
SSBP3-211ENST00000528787 IL17RELQ6ZVW7 336 aa6.38□□□□□ -1.39
SSBP3-211ENST00000528787 ZNF695Q8IW36 515 aa6.38□□□□□ -1.39
SSBP3-211ENST00000528787 DMBX1Q8NFW5 382 aa6.38□□□□□ -1.39
SSBP3-211ENST00000528787 NPBQ8NG41 125 aa6.38□□□□□ -1.39
SSBP3-211ENST00000528787 OR51H1Q8NH63 302 aa6.38□□□□□ -1.39
SSBP3-211ENST00000528787 DDB2Q92466 427 aa6.38□□□□□ -1.39
SSBP3-211ENST00000528787 CFHR4Q92496 578 aa6.38□□□□□ -1.39
SSBP3-211ENST00000528787 TMEM68Q96MH6 324 aa6.38□□□□□ -1.39
SSBP3-211ENST00000528787 SPIN2AQ99865 258 aa6.38□□□□□ -1.39
SSBP3-211ENST00000528787 SPIN2BQ9BPZ2 258 aa6.38□□□□□ -1.39
SSBP3-211ENST00000528787 SLC25A33Q9BSK2 321 aa6.38□□□□□ -1.39
SSBP3-211ENST00000528787 PDCD10Q9BUL8 212 aa6.38□□□□□ -1.39
SSBP3-211ENST00000528787 TMEM222Q9H0R3 208 aa6.38□□□□□ -1.39
SSBP3-211ENST00000528787 C20orf85Q9H1P6 137 aa6.38□□□□□ -1.39
SSBP3-211ENST00000528787 SONP18583 2426 aaKnown RBP6.38□□□□□ -1.39
SSBP3-211ENST00000528787 NSD1Q96L73 2696 aaPredicted RBP6.38□□□□□ -1.39
SSBP3-211ENST00000528787 ZNF469Q96JG9 3925 aaPredicted RBP6.37□□□□□ -1.39
SSBP3-211ENST00000528787 A6NDX4 124 aa6.37□□□□□ -1.39
SSBP3-211ENST00000528787 DNAJC9-AS1A6NH13 148 aa6.37□□□□□ -1.39
SSBP3-211ENST00000528787 PLA2G10O15496 165 aa6.37□□□□□ -1.39
SSBP3-211ENST00000528787 TNFSF12O43508 249 aa6.37□□□□□ -1.39
SSBP3-211ENST00000528787 OR2A4O95047 310 aa6.37□□□□□ -1.39
SSBP3-211ENST00000528787 CRYZL1O95825 349 aa6.37□□□□□ -1.39
SSBP3-211ENST00000528787 HLA-AP01891 365 aaKnown RBP6.37□□□□□ -1.39
SSBP3-211ENST00000528787 H2AFB2P0C5Z0 115 aa6.37□□□□□ -1.39
SSBP3-211ENST00000528787 VAMP1P23763 118 aa6.37□□□□□ -1.39
SSBP3-211ENST00000528787 UCP1P25874 307 aa6.37□□□□□ -1.39
SSBP3-211ENST00000528787 MECP2P51608 486 aaKnown RBP6.37□□□□□ -1.39
SSBP3-211ENST00000528787 AKR1C2P52895 323 aa6.37□□□□□ -1.39
SSBP3-211ENST00000528787 DLX1P56177 255 aa6.37□□□□□ -1.39
SSBP3-211ENST00000528787 UBE2KP61086 200 aa6.37□□□□□ -1.39
SSBP3-211ENST00000528787 TMEM267Q0VDI3 215 aaPredicted RBP6.37□□□□□ -1.39
SSBP3-211ENST00000528787 MMDQ15546 238 aa6.37□□□□□ -1.39
SSBP3-211ENST00000528787 SLC9A3R2Q15599 337 aa6.37□□□□□ -1.39
SSBP3-211ENST00000528787 POU2AF1Q16633 256 aa6.37□□□□□ -1.39
SSBP3-211ENST00000528787 LIN54Q6MZP7 749 aa6.37□□□□□ -1.39
SSBP3-211ENST00000528787 FAAP20Q6NZ36 180 aa6.37□□□□□ -1.39
SSBP3-211ENST00000528787 Q71RC1 249 aaPredicted RBP6.37□□□□□ -1.39
SSBP3-211ENST00000528787 HSD17B13Q7Z5P4 300 aaPredicted RBP6.37□□□□□ -1.39
SSBP3-211ENST00000528787 SLC25A42Q86VD7 318 aa6.37□□□□□ -1.39
SSBP3-211ENST00000528787 FOXRED2Q8IWF2 684 aa6.37□□□□□ -1.39
SSBP3-211ENST00000528787 MMD2Q8IY49 270 aa6.37□□□□□ -1.39
SSBP3-211ENST00000528787 ZNF383Q8NA42 475 aa6.37□□□□□ -1.39
SSBP3-211ENST00000528787 OR2T6Q8NHC8 308 aa6.37□□□□□ -1.39
SSBP3-211ENST00000528787 C22orf15Q8WYQ4 148 aa6.37□□□□□ -1.39
SSBP3-211ENST00000528787 RBPMSQ93062 196 aaKnown RBP6.37□□□□□ -1.39
SSBP3-211ENST00000528787 EAF1Q96JC9 268 aaPredicted RBP6.37□□□□□ -1.39
SSBP3-211ENST00000528787 RHOVQ96L33 236 aa6.37□□□□□ -1.39
SSBP3-211ENST00000528787 OR2A7Q96R45 310 aa6.37□□□□□ -1.39
SSBP3-211ENST00000528787 CLCC1Q96S66 551 aa6.37□□□□□ -1.39
SSBP3-211ENST00000528787 PARP12Q9H0J9 701 aaKnown RBP6.37□□□□□ -1.39
SSBP3-211ENST00000528787 C5orf66Q9H5L9 145 aa6.37□□□□□ -1.39
SSBP3-211ENST00000528787 ZFP57Q9NU63 452 aa6.37□□□□□ -1.39
SSBP3-211ENST00000528787 NUDT15Q9NV35 164 aa6.37□□□□□ -1.39
SSBP3-211ENST00000528787 BET1LQ9NYM9 111 aa6.37□□□□□ -1.39
SSBP3-211ENST00000528787 A0A0B4J2A0 478 aa6.36□□□□□ -1.39
SSBP3-211ENST00000528787 MARCH11A6NNE9 402 aa6.36□□□□□ -1.39
SSBP3-211ENST00000528787 LINC00473A8K010 186 aa6.36□□□□□ -1.39
SSBP3-211ENST00000528787 CYSRT1A8MQ03 144 aa6.36□□□□□ -1.39
SSBP3-211ENST00000528787 SNRPGP15A8MWD9 76 aa6.36□□□□□ -1.39
SSBP3-211ENST00000528787 RRHO14718 337 aa6.36□□□□□ -1.39
SSBP3-211ENST00000528787 ARPC1BO15143 372 aaKnown RBP6.36□□□□□ -1.39
SSBP3-211ENST00000528787 NDUFA3O95167 84 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms