RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 Q3ZCU0 254 aa15.36■□□□□ 0.05
SMPD1-203ENST00000527275 MED9Q9NWA0 146 aa15.36■□□□□ 0.05
SMPD1-203ENST00000527275 FAM157AC9JC47 383 aa15.36■□□□□ 0.05
SMPD1-203ENST00000527275 USF1P22415 310 aaPredicted RBP15.36■□□□□ 0.05
SMPD1-203ENST00000527275 ZNF134P52741 427 aa15.36■□□□□ 0.05
SMPD1-203ENST00000527275 VAMP2P63027 116 aa15.36■□□□□ 0.05
SMPD1-203ENST00000527275 OR2B11Q5JQS5 317 aa15.36■□□□□ 0.05
SMPD1-203ENST00000527275 PRSS57Q6UWY2 283 aa15.36■□□□□ 0.05
SMPD1-203ENST00000527275 OR2C3Q8N628 320 aa15.36■□□□□ 0.05
SMPD1-203ENST00000527275 TCTEX1D1Q8N7M0 179 aa15.36■□□□□ 0.05
SMPD1-203ENST00000527275 LY6G5BQ8NDX9 201 aa15.36■□□□□ 0.05
SMPD1-203ENST00000527275 BSCL2Q96G97 398 aaPredicted RBP15.36■□□□□ 0.05
SMPD1-203ENST00000527275 HSD17B10Q99714 261 aaKnown RBP15.36■□□□□ 0.05
SMPD1-203ENST00000527275 CACNG5Q9UF02 275 aa15.36■□□□□ 0.05
SMPD1-203ENST00000527275 BAHCC1Q9P281 2608 aa15.36■□□□□ 0.05
SMPD1-203ENST00000527275 CREBBPQ92793 2442 aa15.36■□□□□ 0.05
SMPD1-203ENST00000527275 C17orf98A8MV24 154 aa15.35■□□□□ 0.05
SMPD1-203ENST00000527275 WRBO00258 174 aa15.35■□□□□ 0.05
SMPD1-203ENST00000527275 CHST1O43916 411 aa15.35■□□□□ 0.05
SMPD1-203ENST00000527275 JTBO76095 146 aa15.35■□□□□ 0.05
SMPD1-203ENST00000527275 IGHV3-7P01780 117 aa15.35■□□□□ 0.05
SMPD1-203ENST00000527275 DLX6P56179 175 aa15.35■□□□□ 0.05
SMPD1-203ENST00000527275 NHLH2Q02577 135 aa15.35■□□□□ 0.05
SMPD1-203ENST00000527275 UTF1Q5T230 341 aa15.35■□□□□ 0.05
SMPD1-203ENST00000527275 PRAMEF5Q5TYX0 476 aa15.35■□□□□ 0.05
SMPD1-203ENST00000527275 SPAG16Q8N0X2 631 aa15.35■□□□□ 0.05
SMPD1-203ENST00000527275 C11orf42Q8N5U0 333 aa15.35■□□□□ 0.05
SMPD1-203ENST00000527275 LPAR2Q9HBW0 351 aa15.35■□□□□ 0.05
SMPD1-203ENST00000527275 GFOD1Q9NXC2 390 aa15.35■□□□□ 0.05
SMPD1-203ENST00000527275 PFDN2Q9UHV9 154 aa15.35■□□□□ 0.05
SMPD1-203ENST00000527275 ZNF469Q96JG9 3925 aaPredicted RBP15.35■□□□□ 0.05
SMPD1-203ENST00000527275 FAM24AA6NFZ4 105 aa15.35■□□□□ 0.05
SMPD1-203ENST00000527275 GAPDHP04406 335 aaKnown RBP15.35■□□□□ 0.05
SMPD1-203ENST00000527275 MMP9P14780 707 aa15.35■□□□□ 0.05
SMPD1-203ENST00000527275 CAV2P51636 162 aa15.35■□□□□ 0.05
SMPD1-203ENST00000527275 BRWD1-AS2P59051 145 aa15.35■□□□□ 0.05
SMPD1-203ENST00000527275 ZNF816Q0VGE8 651 aaPredicted RBP15.35■□□□□ 0.05
SMPD1-203ENST00000527275 HEPN1Q6WQI6 88 aa15.35■□□□□ 0.05
SMPD1-203ENST00000527275 TMED6Q8WW62 240 aa15.35■□□□□ 0.05
SMPD1-203ENST00000527275 FAM212BQ9NTI7 297 aaPredicted RBP15.35■□□□□ 0.05
SMPD1-203ENST00000527275 A0A096LNT2 108 aa15.34■□□□□ 0.05
SMPD1-203ENST00000527275 LINC00473A8K010 186 aa15.34■□□□□ 0.05
SMPD1-203ENST00000527275 A8MXK9 166 aa15.34■□□□□ 0.05
SMPD1-203ENST00000527275 LIPFP07098 398 aa15.34■□□□□ 0.05
SMPD1-203ENST00000527275 NFYBP25208 207 aa15.34■□□□□ 0.05
SMPD1-203ENST00000527275 Q96MF0 132 aa15.34■□□□□ 0.05
SMPD1-203ENST00000527275 MMP26Q9NRE1 261 aa15.34■□□□□ 0.05
SMPD1-203ENST00000527275 ITGB1BP1O14713 200 aa15.34■□□□□ 0.05
SMPD1-203ENST00000527275 PROP1O75360 226 aa15.34■□□□□ 0.05
SMPD1-203ENST00000527275 LINC00205P59089 165 aa15.34■□□□□ 0.05
SMPD1-203ENST00000527275 AANATQ16613 207 aa15.34■□□□□ 0.05
SMPD1-203ENST00000527275 LYRM2Q9NU23 88 aaPredicted RBP15.34■□□□□ 0.05
SMPD1-203ENST00000527275 IDI2-AS1Q9NZ38 188 aa15.34■□□□□ 0.05
SMPD1-203ENST00000527275 MMP24Q9Y5R2 645 aa15.34■□□□□ 0.05
SMPD1-203ENST00000527275 RNF223E7ERA6 249 aa15.33■□□□□ 0.04
SMPD1-203ENST00000527275 FOXH1O75593 365 aa15.33■□□□□ 0.04
SMPD1-203ENST00000527275 EWSR1Q01844 656 aaKnown RBP eCLIP15.33■□□□□ 0.04
SMPD1-203ENST00000527275 PAX2Q02962 417 aa15.33■□□□□ 0.04
SMPD1-203ENST00000527275 LEAP2Q969E1 77 aa15.33■□□□□ 0.04
SMPD1-203ENST00000527275 REG4Q9BYZ8 158 aa15.33■□□□□ 0.04
SMPD1-203ENST00000527275 SLC25A31Q9H0C2 315 aa15.33■□□□□ 0.04
SMPD1-203ENST00000527275 IFI27L2Q9H2X8 130 aa15.33■□□□□ 0.04
SMPD1-203ENST00000527275 ZANQ9Y493 2812 aa15.33■□□□□ 0.04
SMPD1-203ENST00000527275 A0A1W2PPH5 198 aa15.32■□□□□ 0.04
SMPD1-203ENST00000527275 ATG12O94817 140 aa15.32■□□□□ 0.04
SMPD1-203ENST00000527275 TMEM50AO95807 157 aa15.32■□□□□ 0.04
SMPD1-203ENST00000527275 KRASP01116 189 aa15.32■□□□□ 0.04
SMPD1-203ENST00000527275 DUTP33316 252 aaKnown RBP15.32■□□□□ 0.04
SMPD1-203ENST00000527275 RAB7AP51149 207 aa15.32■□□□□ 0.04
SMPD1-203ENST00000527275 ARF6P62330 175 aa15.32■□□□□ 0.04
SMPD1-203ENST00000527275 EIF5AL1Q6IS14 154 aaKnown RBP15.32■□□□□ 0.04
SMPD1-203ENST00000527275 MAPK1IP1LQ8NDC0 245 aa15.32■□□□□ 0.04
SMPD1-203ENST00000527275 WFDC11Q8NEX6 87 aa15.32■□□□□ 0.04
SMPD1-203ENST00000527275 LRRC20Q8TCA0 184 aa15.32■□□□□ 0.04
SMPD1-203ENST00000527275 RNF141Q8WVD5 230 aa15.32■□□□□ 0.04
SMPD1-203ENST00000527275 WFDC1Q9HC57 220 aa15.32■□□□□ 0.04
SMPD1-203ENST00000527275 ONECUT1Q9UBC0 465 aa15.32■□□□□ 0.04
SMPD1-203ENST00000527275 ITPR3Q14573 2671 aa15.32■□□□□ 0.04
SMPD1-203ENST00000527275 IGSF23A1L1A6 192 aa15.32■□□□□ 0.04
SMPD1-203ENST00000527275 SLC31A2O15432 143 aa15.32■□□□□ 0.04
SMPD1-203ENST00000527275 S1PR2O95136 353 aa15.32■□□□□ 0.04
SMPD1-203ENST00000527275 G6PCP35575 357 aa15.32■□□□□ 0.04
SMPD1-203ENST00000527275 DLX1P56177 255 aa15.32■□□□□ 0.04
SMPD1-203ENST00000527275 CT45A1Q5HYN5 189 aa15.32■□□□□ 0.04
SMPD1-203ENST00000527275 NCR3LG1Q68D85 454 aa15.32■□□□□ 0.04
SMPD1-203ENST00000527275 TMEM252Q8N6L7 170 aa15.32■□□□□ 0.04
SMPD1-203ENST00000527275 UBAC2Q8NBM4 344 aa15.32■□□□□ 0.04
SMPD1-203ENST00000527275 CT45A3Q8NHU0 189 aa15.32■□□□□ 0.04
SMPD1-203ENST00000527275 ABHD14AQ9BUJ0 271 aa15.32■□□□□ 0.04
SMPD1-203ENST00000527275 GAB2Q9UQC2 676 aa15.32■□□□□ 0.04
SMPD1-203ENST00000527275 BORCS7-ASMTA0A0B4J1R7 106 aa15.31■□□□□ 0.04
SMPD1-203ENST00000527275 MFSD2BA6NFX1 497 aa15.31■□□□□ 0.04
SMPD1-203ENST00000527275 TEX46H3BTG2 121 aa15.31■□□□□ 0.04
SMPD1-203ENST00000527275 FGF16O43320 207 aa15.31■□□□□ 0.04
SMPD1-203ENST00000527275 IGHV1-8P0DP01 117 aa15.31■□□□□ 0.04
SMPD1-203ENST00000527275 PAX9P55771 341 aa15.31■□□□□ 0.04
SMPD1-203ENST00000527275 RPL39P5Q59GN2 51 aa15.31■□□□□ 0.04
SMPD1-203ENST00000527275 CD300LFQ8TDQ1 290 aa15.31■□□□□ 0.04
SMPD1-203ENST00000527275 FOXC2Q99958 501 aa15.31■□□□□ 0.04
SMPD1-203ENST00000527275 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms