RNA–Protein interactions for RNA: ENST00000527013.5

CHEK1-209, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-209ENST00000527013 SHOXO15266 292 aa12.17□□□□□ -0.46
CHEK1-209ENST00000527013 FABP7O15540 132 aa12.17□□□□□ -0.46
CHEK1-209ENST00000527013 CBX3Q13185 183 aa12.17□□□□□ -0.46
CHEK1-209ENST00000527013 PRSS8Q16651 343 aa12.17□□□□□ -0.46
CHEK1-209ENST00000527013 RTL8BQ17RB0 113 aa12.17□□□□□ -0.46
CHEK1-209ENST00000527013 TMEM91Q6ZNR0 172 aa12.17□□□□□ -0.46
CHEK1-209ENST00000527013 FAM223AQ8IWN6 122 aa12.17□□□□□ -0.46
CHEK1-209ENST00000527013 OR56B1Q8NGI3 324 aa12.17□□□□□ -0.46
CHEK1-209ENST00000527013 DDB2Q92466 427 aa12.17□□□□□ -0.46
CHEK1-209ENST00000527013 C5orf30Q96GV9 206 aa12.17□□□□□ -0.46
CHEK1-209ENST00000527013 RETNQ9HD89 108 aa12.17□□□□□ -0.46
CHEK1-209ENST00000527013 KCNK7Q9Y2U2 307 aa12.17□□□□□ -0.46
CHEK1-209ENST00000527013 ZNF785A8K8V0 405 aa12.16□□□□□ -0.46
CHEK1-209ENST00000527013 BMPR1BO00238 502 aa12.16□□□□□ -0.46
CHEK1-209ENST00000527013 TPPPO94811 219 aa12.16□□□□□ -0.46
CHEK1-209ENST00000527013 RANBP1P43487 201 aa12.16□□□□□ -0.46
CHEK1-209ENST00000527013 CD81P60033 236 aa12.16□□□□□ -0.46
CHEK1-209ENST00000527013 UBE2KP61086 200 aa12.16□□□□□ -0.46
CHEK1-209ENST00000527013 RAB11BQ15907 218 aa12.16□□□□□ -0.46
CHEK1-209ENST00000527013 CD300EQ496F6 205 aaPredicted RBP12.16□□□□□ -0.46
CHEK1-209ENST00000527013 IGSF11Q5DX21 431 aa12.16□□□□□ -0.46
CHEK1-209ENST00000527013 OR10J5Q8NHC4 309 aa12.16□□□□□ -0.46
CHEK1-209ENST00000527013 SRSF12Q8WXF0 261 aaKnown RBP12.16□□□□□ -0.46
CHEK1-209ENST00000527013 PHB2Q99623 299 aa12.16□□□□□ -0.46
CHEK1-209ENST00000527013 NEURL2Q9BR09 285 aa12.16□□□□□ -0.46
CHEK1-209ENST00000527013 PLEKHA3Q9HB20 300 aa12.16□□□□□ -0.46
CHEK1-209ENST00000527013 AKIP1Q9NQ31 210 aa12.16□□□□□ -0.46
CHEK1-209ENST00000527013 ZC4H2Q9NQZ6 224 aa12.16□□□□□ -0.46
CHEK1-209ENST00000527013 SLC2A8Q9NY64 477 aa12.16□□□□□ -0.46
CHEK1-209ENST00000527013 ZNF230Q9UIE0 474 aaPredicted RBP12.16□□□□□ -0.46
CHEK1-209ENST00000527013 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.15□□□□□ -0.46
CHEK1-209ENST00000527013 BET1O15155 118 aa12.15□□□□□ -0.46
CHEK1-209ENST00000527013 ARL6IP5O75915 188 aa12.15□□□□□ -0.46
CHEK1-209ENST00000527013 FCGR3AP08637 254 aa12.15□□□□□ -0.46
CHEK1-209ENST00000527013 CD3GP09693 182 aa12.15□□□□□ -0.46
CHEK1-209ENST00000527013 RHOGP84095 191 aa12.15□□□□□ -0.46
CHEK1-209ENST00000527013 TPBGQ13641 420 aa12.15□□□□□ -0.46
CHEK1-209ENST00000527013 IRF3Q14653 427 aa12.15□□□□□ -0.46
CHEK1-209ENST00000527013 MED22Q15528 200 aa12.15□□□□□ -0.46
CHEK1-209ENST00000527013 VMA21Q3ZAQ7 101 aa12.15□□□□□ -0.46
CHEK1-209ENST00000527013 FAM209BQ5JX69 171 aa12.15□□□□□ -0.46
CHEK1-209ENST00000527013 OSR1Q8TAX0 266 aaPredicted RBP12.15□□□□□ -0.46
CHEK1-209ENST00000527013 FAM3DQ96BQ1 224 aa12.15□□□□□ -0.46
CHEK1-209ENST00000527013 KCTD12Q96CX2 325 aaKnown RBP12.15□□□□□ -0.46
CHEK1-209ENST00000527013 ADTRPQ96IZ2 230 aa12.15□□□□□ -0.46
CHEK1-209ENST00000527013 AK6Q9Y3D8 172 aaKnown RBP12.15□□□□□ -0.46
CHEK1-209ENST00000527013 PLECQ15149 4684 aaKnown RBP12.15□□□□□ -0.46
CHEK1-209ENST00000527013 RBMY1BA6NDE4 496 aaKnown RBP12.14□□□□□ -0.47
CHEK1-209ENST00000527013 RBMY1EA6NEQ0 496 aaKnown RBP12.14□□□□□ -0.47
CHEK1-209ENST00000527013 DENRO43583 198 aaKnown RBP12.14□□□□□ -0.47
CHEK1-209ENST00000527013 CD7P09564 240 aa12.14□□□□□ -0.47
CHEK1-209ENST00000527013 RBMY1DP0C7P1 496 aaKnown RBP12.14□□□□□ -0.47
CHEK1-209ENST00000527013 GSTT2P0CG29 244 aa12.14□□□□□ -0.47
CHEK1-209ENST00000527013 GSTT2BP0CG30 244 aa12.14□□□□□ -0.47
CHEK1-209ENST00000527013 APELAP0DMC3 54 aa12.14□□□□□ -0.47
CHEK1-209ENST00000527013 DUTP33316 252 aaKnown RBP12.14□□□□□ -0.47
CHEK1-209ENST00000527013 ZNF45Q02386 682 aa12.14□□□□□ -0.47
CHEK1-209ENST00000527013 EXOSC2Q13868 293 aaKnown RBP12.14□□□□□ -0.47
CHEK1-209ENST00000527013 TRAM1Q15629 374 aa12.14□□□□□ -0.47
CHEK1-209ENST00000527013 TNXAQ16473 311 aa12.14□□□□□ -0.47
CHEK1-209ENST00000527013 DEFB114Q30KQ6 69 aa12.14□□□□□ -0.47
CHEK1-209ENST00000527013 C2orf76Q3KRA6 126 aa12.14□□□□□ -0.47
CHEK1-209ENST00000527013 OGFRL1Q5TC84 451 aaPredicted RBP12.14□□□□□ -0.47
CHEK1-209ENST00000527013 LIPKQ5VXJ0 399 aa12.14□□□□□ -0.47
CHEK1-209ENST00000527013 NECAP1Q8NC96 275 aa12.14□□□□□ -0.47
CHEK1-209ENST00000527013 UFD1Q92890 307 aa12.14□□□□□ -0.47
CHEK1-209ENST00000527013 TMEM203Q969S6 136 aa12.14□□□□□ -0.47
CHEK1-209ENST00000527013 FAM110AQ9BQ89 295 aa12.14□□□□□ -0.47
CHEK1-209ENST00000527013 DMRT1Q9Y5R6 373 aa12.14□□□□□ -0.47
CHEK1-209ENST00000527013 ERICH4A6NGS2 130 aa12.13□□□□□ -0.47
CHEK1-209ENST00000527013 PTGES3LE9PB15 166 aa12.13□□□□□ -0.47
CHEK1-209ENST00000527013 CASQ2O14958 399 aaPredicted RBP12.13□□□□□ -0.47
CHEK1-209ENST00000527013 PSMA1P25786 263 aaKnown RBP12.13□□□□□ -0.47
CHEK1-209ENST00000527013 KIR2DS2P43631 304 aa12.13□□□□□ -0.47
CHEK1-209ENST00000527013 CLDN12P56749 244 aa12.13□□□□□ -0.47
CHEK1-209ENST00000527013 MRPS15P82914 257 aaKnown RBP12.13□□□□□ -0.47
CHEK1-209ENST00000527013 ATP5G2Q06055 141 aa12.13□□□□□ -0.47
CHEK1-209ENST00000527013 TTC9CQ8N5M4 171 aa12.13□□□□□ -0.47
CHEK1-209ENST00000527013 DEFB125Q8N687 156 aa12.13□□□□□ -0.47
CHEK1-209ENST00000527013 RAB3CQ96E17 227 aa12.13□□□□□ -0.47
CHEK1-209ENST00000527013 SPIN2AQ99865 258 aa12.13□□□□□ -0.47
CHEK1-209ENST00000527013 SPIN2BQ9BPZ2 258 aa12.13□□□□□ -0.47
CHEK1-209ENST00000527013 CENPOQ9BU64 300 aa12.13□□□□□ -0.47
CHEK1-209ENST00000527013 TECRQ9NZ01 308 aaKnown RBP12.13□□□□□ -0.47
CHEK1-209ENST00000527013 RAB22AQ9UL26 194 aa12.13□□□□□ -0.47
CHEK1-209ENST00000527013 LINC00473A8K010 186 aa12.12□□□□□ -0.47
CHEK1-209ENST00000527013 LGALS9O00182 355 aa12.12□□□□□ -0.47
CHEK1-209ENST00000527013 EBAG9O00559 213 aa12.12□□□□□ -0.47
CHEK1-209ENST00000527013 MPPED1O15442 326 aa12.12□□□□□ -0.47
CHEK1-209ENST00000527013 CREBL2O60519 120 aaPredicted RBP12.12□□□□□ -0.47
CHEK1-209ENST00000527013 TUSC2O75896 110 aa12.12□□□□□ -0.47
CHEK1-209ENST00000527013 CRYZL1O95825 349 aa12.12□□□□□ -0.47
CHEK1-209ENST00000527013 PSMD7P51665 324 aa12.12□□□□□ -0.47
CHEK1-209ENST00000527013 CDK10Q15131 360 aa12.12□□□□□ -0.47
CHEK1-209ENST00000527013 IDO2Q6ZQW0 420 aa12.12□□□□□ -0.47
CHEK1-209ENST00000527013 Q6ZS49 121 aa12.12□□□□□ -0.47
CHEK1-209ENST00000527013 ZNF430Q9H8G1 570 aaPredicted RBP12.12□□□□□ -0.47
CHEK1-209ENST00000527013 V9GY05 133 aa12.12□□□□□ -0.47
CHEK1-209ENST00000527013 TMEM272A0A1B0GTI8 110 aa12.11□□□□□ -0.47
CHEK1-209ENST00000527013 C2orf70A6NJV1 201 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms