RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 TMEM89A2RUT3 159 aa4.08□□□□□ -1.76
SVIP-202ENST00000525670 METTL21EPA6NDL7 271 aa4.08□□□□□ -1.76
SVIP-202ENST00000525670 A6NDX4 124 aa4.08□□□□□ -1.76
SVIP-202ENST00000525670 NCBP2LA6PVI3 153 aaKnown RBP4.08□□□□□ -1.76
SVIP-202ENST00000525670 FAM25AB3EWG3 89 aa4.08□□□□□ -1.76
SVIP-202ENST00000525670 FAM25CB3EWG5 89 aa4.08□□□□□ -1.76
SVIP-202ENST00000525670 FAM25GB3EWG6 89 aa4.08□□□□□ -1.76
SVIP-202ENST00000525670 NPIPB11E5RHQ5 1161 aa4.08□□□□□ -1.76
SVIP-202ENST00000525670 FABP7O15540 132 aa4.08□□□□□ -1.76
SVIP-202ENST00000525670 SSX5O60225 188 aa4.08□□□□□ -1.76
SVIP-202ENST00000525670 HPGDSO60760 199 aa4.08□□□□□ -1.76
SVIP-202ENST00000525670 NOL3O60936 208 aaKnown RBP4.08□□□□□ -1.76
SVIP-202ENST00000525670 GABARAPO95166 117 aa4.08□□□□□ -1.76
SVIP-202ENST00000525670 NAPSAO96009 420 aa4.08□□□□□ -1.76
SVIP-202ENST00000525670 GLAP06280 429 aa4.08□□□□□ -1.76
SVIP-202ENST00000525670 CGB3P0DN86 165 aa4.08□□□□□ -1.76
SVIP-202ENST00000525670 CGB7P0DN87 165 aa4.08□□□□□ -1.76
SVIP-202ENST00000525670 IL3RAP26951 378 aa4.08□□□□□ -1.76
SVIP-202ENST00000525670 CNTFRP26992 372 aa4.08□□□□□ -1.76
SVIP-202ENST00000525670 MNDAP41218 407 aa4.08□□□□□ -1.76
SVIP-202ENST00000525670 VDAC2P45880 294 aaPredicted RBP4.08□□□□□ -1.76
SVIP-202ENST00000525670 PSMD7P51665 324 aa4.08□□□□□ -1.76
SVIP-202ENST00000525670 PRRX1P54821 245 aa4.08□□□□□ -1.76
SVIP-202ENST00000525670 BPIFB3P59826 476 aa4.08□□□□□ -1.76
SVIP-202ENST00000525670 BLCAPP62952 87 aa4.08□□□□□ -1.76
SVIP-202ENST00000525670 CDNFQ49AH0 187 aa4.08□□□□□ -1.76
SVIP-202ENST00000525670 ABCA11PQ4W5N1 156 aa4.08□□□□□ -1.76
SVIP-202ENST00000525670 CT45A1Q5HYN5 189 aa4.08□□□□□ -1.76
SVIP-202ENST00000525670 MINOS1Q5TGZ0 78 aa4.08□□□□□ -1.76
SVIP-202ENST00000525670 C10orf99Q6UWK7 81 aa4.08□□□□□ -1.76
SVIP-202ENST00000525670 FAM131AQ6UXB0 335 aa4.08□□□□□ -1.76
SVIP-202ENST00000525670 GDPGP1Q6ZNW5 385 aa4.08□□□□□ -1.76
SVIP-202ENST00000525670 MOB1BQ7L9L4 216 aa4.08□□□□□ -1.76
SVIP-202ENST00000525670 TGIF2LXQ8IUE1 241 aa4.08□□□□□ -1.76
SVIP-202ENST00000525670 TMEM86BQ8N661 226 aa4.08□□□□□ -1.76
SVIP-202ENST00000525670 KLHDC1Q8N7A1 406 aa4.08□□□□□ -1.76
SVIP-202ENST00000525670 ZNF439Q8NDP4 499 aa4.08□□□□□ -1.76
SVIP-202ENST00000525670 OR5R1Q8NH85 324 aa4.08□□□□□ -1.76
SVIP-202ENST00000525670 CT45A3Q8NHU0 189 aa4.08□□□□□ -1.76
SVIP-202ENST00000525670 PIFOQ8TCI5 191 aa4.08□□□□□ -1.76
SVIP-202ENST00000525670 PKD1L1Q8TDX9 2849 aa4.08□□□□□ -1.76
SVIP-202ENST00000525670 PHF21AQ96BD5 680 aa4.08□□□□□ -1.76
SVIP-202ENST00000525670 GALMQ96C23 342 aa4.08□□□□□ -1.76
SVIP-202ENST00000525670 C5orf30Q96GV9 206 aa4.08□□□□□ -1.76
SVIP-202ENST00000525670 GINS4Q9BRT9 223 aa4.08□□□□□ -1.76
SVIP-202ENST00000525670 DCUN1D5Q9BTE7 237 aa4.08□□□□□ -1.76
SVIP-202ENST00000525670 OR2D2Q9H210 308 aa4.08□□□□□ -1.76
SVIP-202ENST00000525670 IFI27L2Q9H2X8 130 aa4.08□□□□□ -1.76
SVIP-202ENST00000525670 ZNF702PQ9H963 129 aa4.08□□□□□ -1.76
SVIP-202ENST00000525670 SEBOXQ9HB31 216 aaPredicted RBP4.08□□□□□ -1.76
SVIP-202ENST00000525670 Q9N2K0 584 aa4.08□□□□□ -1.76
SVIP-202ENST00000525670 MRPS7Q9Y2R9 242 aaKnown RBP4.08□□□□□ -1.76
SVIP-202ENST00000525670 RBM7Q9Y580 266 aaKnown RBP4.08□□□□□ -1.76
SVIP-202ENST00000525670 POMT1Q9Y6A1 747 aa4.08□□□□□ -1.76
SVIP-202ENST00000525670 MINOS1-NBL1R4GNA1 71 aa4.08□□□□□ -1.76
SVIP-202ENST00000525670 A3GALT2U3KPV4 340 aa4.08□□□□□ -1.76
SVIP-202ENST00000525670 TET2Q6N021 2002 aaPredicted RBP4.07□□□□□ -1.76
SVIP-202ENST00000525670 TRIM64CA6NLI5 447 aa4.07□□□□□ -1.76
SVIP-202ENST00000525670 TRDCB7Z8K6 153 aa4.07□□□□□ -1.76
SVIP-202ENST00000525670 CLDN34H7C241 214 aa4.07□□□□□ -1.76
SVIP-202ENST00000525670 M0R1X1 148 aa4.07□□□□□ -1.76
SVIP-202ENST00000525670 RGS5O15539 181 aa4.07□□□□□ -1.76
SVIP-202ENST00000525670 TNFSF12O43508 249 aa4.07□□□□□ -1.76
SVIP-202ENST00000525670 ORC5O43913 435 aa4.07□□□□□ -1.76
SVIP-202ENST00000525670 TFAP2AP05549 437 aa4.07□□□□□ -1.76
SVIP-202ENST00000525670 OR8U9P0C7N5 309 aa4.07□□□□□ -1.76
SVIP-202ENST00000525670 GALP22466 123 aa4.07□□□□□ -1.76
SVIP-202ENST00000525670 NFYAP23511 347 aaPredicted RBP4.07□□□□□ -1.76
SVIP-202ENST00000525670 CD34P28906 385 aa4.07□□□□□ -1.76
SVIP-202ENST00000525670 BRS3P32247 399 aa4.07□□□□□ -1.76
SVIP-202ENST00000525670 CEACAM3P40198 252 aa4.07□□□□□ -1.76
SVIP-202ENST00000525670 CEACAM6P40199 344 aa4.07□□□□□ -1.76
SVIP-202ENST00000525670 GPR12P47775 334 aa4.07□□□□□ -1.76
SVIP-202ENST00000525670 ALDH3B2P48448 385 aa4.07□□□□□ -1.76
SVIP-202ENST00000525670 AMTP48728 403 aa4.07□□□□□ -1.76
SVIP-202ENST00000525670 ARHGDIBP52566 201 aa4.07□□□□□ -1.76
SVIP-202ENST00000525670 TAS2R20P59543 309 aa4.07□□□□□ -1.76
SVIP-202ENST00000525670 FXYD4P59646 89 aa4.07□□□□□ -1.76
SVIP-202ENST00000525670 ARPC4P59998 168 aa4.07□□□□□ -1.76
SVIP-202ENST00000525670 CTF1Q16619 201 aa4.07□□□□□ -1.76
SVIP-202ENST00000525670 NSUN5P1Q3KNT7 163 aa4.07□□□□□ -1.76
SVIP-202ENST00000525670 MORN2Q502X0 79 aa4.07□□□□□ -1.76
SVIP-202ENST00000525670 UBE2NLQ5JXB2 153 aa4.07□□□□□ -1.76
SVIP-202ENST00000525670 TMEM69Q5SWH9 247 aa4.07□□□□□ -1.76
SVIP-202ENST00000525670 TRAT1Q6PIZ9 186 aa4.07□□□□□ -1.76
SVIP-202ENST00000525670 SLC25A48Q6ZT89 311 aaKnown RBP4.07□□□□□ -1.76
SVIP-202ENST00000525670 TPRA1Q86W33 373 aa4.07□□□□□ -1.76
SVIP-202ENST00000525670 TMEM17Q86X19 198 aa4.07□□□□□ -1.76
SVIP-202ENST00000525670 LAX1Q8IWV1 398 aa4.07□□□□□ -1.76
SVIP-202ENST00000525670 ODF3L1Q8IXM7 274 aa4.07□□□□□ -1.76
SVIP-202ENST00000525670 GAPTQ8N292 157 aa4.07□□□□□ -1.76
SVIP-202ENST00000525670 FAM89BQ8N5H3 189 aa4.07□□□□□ -1.76
SVIP-202ENST00000525670 OR8U1Q8NH10 309 aa4.07□□□□□ -1.76
SVIP-202ENST00000525670 OR4F5Q8NH21 305 aa4.07□□□□□ -1.76
SVIP-202ENST00000525670 LINC01006Q8NI28 216 aa4.07□□□□□ -1.76
SVIP-202ENST00000525670 RTN4IP1Q8WWV3 396 aaPredicted RBP4.07□□□□□ -1.76
SVIP-202ENST00000525670 SLC25A46Q96AG3 418 aa4.07□□□□□ -1.76
SVIP-202ENST00000525670 MALSU1Q96EH3 234 aa4.07□□□□□ -1.76
SVIP-202ENST00000525670 NOL4LQ96MY1 436 aaPredicted RBP4.07□□□□□ -1.76
SVIP-202ENST00000525670 CLCC1Q96S66 551 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms