RNA–Protein interactions for RNA: ENST00000525504.5

CCDC90B-204, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-204ENST00000525504 ARPC1BO15143 372 aaKnown RBP4.59□□□□□ -1.67
CCDC90B-204ENST00000525504 FABP7O15540 132 aa4.59□□□□□ -1.67
CCDC90B-204ENST00000525504 DENRO43583 198 aaKnown RBP4.59□□□□□ -1.67
CCDC90B-204ENST00000525504 SPDEFO95238 335 aa4.59□□□□□ -1.67
CCDC90B-204ENST00000525504 IGKV1-16P04430 117 aa4.59□□□□□ -1.67
CCDC90B-204ENST00000525504 TFAP2AP05549 437 aa4.59□□□□□ -1.67
CCDC90B-204ENST00000525504 LGALS7P47929 136 aa4.59□□□□□ -1.67
CCDC90B-204ENST00000525504 VEGFCP49767 419 aa4.59□□□□□ -1.67
CCDC90B-204ENST00000525504 CLDN12P56749 244 aa4.59□□□□□ -1.67
CCDC90B-204ENST00000525504 LINC00205P59089 165 aa4.59□□□□□ -1.67
CCDC90B-204ENST00000525504 GNB1P62873 340 aa4.59□□□□□ -1.67
CCDC90B-204ENST00000525504 SSBP2P81877 361 aaPredicted RBP4.59□□□□□ -1.67
CCDC90B-204ENST00000525504 ZNF616Q08AN1 781 aa4.59□□□□□ -1.67
CCDC90B-204ENST00000525504 TMEM267Q0VDI3 215 aaPredicted RBP4.59□□□□□ -1.67
CCDC90B-204ENST00000525504 PYHIN1Q6K0P9 492 aa4.59□□□□□ -1.67
CCDC90B-204ENST00000525504 TMEM65Q6PI78 240 aa4.59□□□□□ -1.67
CCDC90B-204ENST00000525504 FAM131AQ6UXB0 335 aa4.59□□□□□ -1.67
CCDC90B-204ENST00000525504 GLDNQ6ZMI3 551 aaPredicted RBP4.59□□□□□ -1.67
CCDC90B-204ENST00000525504 ZNF367Q7RTV3 350 aa4.59□□□□□ -1.67
CCDC90B-204ENST00000525504 ZNF429Q86V71 674 aa4.59□□□□□ -1.67
CCDC90B-204ENST00000525504 PDPNQ86YL7 162 aa4.59□□□□□ -1.67
CCDC90B-204ENST00000525504 OR4A4PQ8NGN8 299 aa4.59□□□□□ -1.67
CCDC90B-204ENST00000525504 RAB3CQ96E17 227 aa4.59□□□□□ -1.67
CCDC90B-204ENST00000525504 TSNAXQ99598 290 aaKnown RBP4.59□□□□□ -1.67
CCDC90B-204ENST00000525504 CMSS1Q9BQ75 279 aaKnown RBP4.59□□□□□ -1.67
CCDC90B-204ENST00000525504 CABLES2Q9BTV7 478 aa4.59□□□□□ -1.67
CCDC90B-204ENST00000525504 WDR12Q9GZL7 423 aaKnown RBP4.59□□□□□ -1.67
CCDC90B-204ENST00000525504 VCX3BQ9H321 246 aa4.59□□□□□ -1.67
CCDC90B-204ENST00000525504 FBXL15Q9H469 300 aa4.59□□□□□ -1.67
CCDC90B-204ENST00000525504 CHMP1AQ9HD42 196 aaPredicted RBP4.59□□□□□ -1.67
CCDC90B-204ENST00000525504 PARP11Q9NR21 331 aa4.59□□□□□ -1.67
CCDC90B-204ENST00000525504 NDUFB11Q9NX14 153 aa4.59□□□□□ -1.67
CCDC90B-204ENST00000525504 RDH8Q9NYR8 311 aa4.59□□□□□ -1.67
CCDC90B-204ENST00000525504 KIAA1456Q9P272 454 aa4.59□□□□□ -1.67
CCDC90B-204ENST00000525504 RNF150Q9ULK6 438 aa4.59□□□□□ -1.67
CCDC90B-204ENST00000525504 RAB26Q9ULW5 256 aa4.59□□□□□ -1.67
CCDC90B-204ENST00000525504 FOXA2Q9Y261 457 aaPredicted RBP4.59□□□□□ -1.67
CCDC90B-204ENST00000525504 DNAH7Q8WXX0 4024 aa4.59□□□□□ -1.68
CCDC90B-204ENST00000525504 DYNC2H1Q8NCM8 4307 aaKnown RBP4.58□□□□□ -1.68
CCDC90B-204ENST00000525504 SRRM4A7MD48 611 aaKnown RBP4.58□□□□□ -1.68
CCDC90B-204ENST00000525504 PDCD5O14737 125 aa4.58□□□□□ -1.68
CCDC90B-204ENST00000525504 HSPA12AO43301 675 aa4.58□□□□□ -1.68
CCDC90B-204ENST00000525504 IGLV2-23P01705 113 aa4.58□□□□□ -1.68
CCDC90B-204ENST00000525504 HSPB1P04792 205 aaKnown RBP4.58□□□□□ -1.68
CCDC90B-204ENST00000525504 LGALS1P09382 135 aaKnown RBP4.58□□□□□ -1.68
CCDC90B-204ENST00000525504 GSTT2P0CG29 244 aa4.58□□□□□ -1.68
CCDC90B-204ENST00000525504 GSTT2BP0CG30 244 aa4.58□□□□□ -1.68
CCDC90B-204ENST00000525504 HIST1H1DP16402 221 aaKnown RBP4.58□□□□□ -1.68
CCDC90B-204ENST00000525504 FGF9P31371 208 aaPredicted RBP4.58□□□□□ -1.68
CCDC90B-204ENST00000525504 OR10A3P58181 314 aa4.58□□□□□ -1.68
CCDC90B-204ENST00000525504 CD69Q07108 199 aa4.58□□□□□ -1.68
CCDC90B-204ENST00000525504 ARL6IP1Q15041 203 aa4.58□□□□□ -1.68
CCDC90B-204ENST00000525504 MRGPRG-AS1Q2M3A8 158 aa4.58□□□□□ -1.68
CCDC90B-204ENST00000525504 MOGAT2Q3SYC2 334 aa4.58□□□□□ -1.68
CCDC90B-204ENST00000525504 ZNF260Q3ZCT1 412 aa4.58□□□□□ -1.68
CCDC90B-204ENST00000525504 ACTBL2Q562R1 376 aa4.58□□□□□ -1.68
CCDC90B-204ENST00000525504 UBE2UQ5VVX9 321 aa4.58□□□□□ -1.68
CCDC90B-204ENST00000525504 C11orf87Q6NUJ2 197 aa4.58□□□□□ -1.68
CCDC90B-204ENST00000525504 PPP1R27Q86WC6 154 aa4.58□□□□□ -1.68
CCDC90B-204ENST00000525504 NR2C2APQ86WQ0 139 aa4.58□□□□□ -1.68
CCDC90B-204ENST00000525504 SPARTQ8N0X7 666 aa4.58□□□□□ -1.68
CCDC90B-204ENST00000525504 DRAXINQ8NBI3 349 aaPredicted RBP4.58□□□□□ -1.68
CCDC90B-204ENST00000525504 LFNGQ8NES3 379 aa4.58□□□□□ -1.68
CCDC90B-204ENST00000525504 OR10R2Q8NGX6 335 aa4.58□□□□□ -1.68
CCDC90B-204ENST00000525504 SETD6Q8TBK2 473 aa4.58□□□□□ -1.68
CCDC90B-204ENST00000525504 DCUN1D4Q92564 292 aa4.58□□□□□ -1.68
CCDC90B-204ENST00000525504 TRIM63Q969Q1 353 aa4.58□□□□□ -1.68
CCDC90B-204ENST00000525504 FLYWCH2Q96CP2 140 aaKnown RBP4.58□□□□□ -1.68
CCDC90B-204ENST00000525504 TMEM68Q96MH6 324 aa4.58□□□□□ -1.68
CCDC90B-204ENST00000525504 YTHDF1Q9BYJ9 559 aaKnown RBP4.58□□□□□ -1.68
CCDC90B-204ENST00000525504 CCDC90BQ9GZT6 254 aa4.58□□□□□ -1.68
CCDC90B-204ENST00000525504 SLA2Q9H6Q3 261 aa4.58□□□□□ -1.68
CCDC90B-204ENST00000525504 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.58□□□□□ -1.68
CCDC90B-204ENST00000525504 SDHAF2Q9NX18 166 aa4.58□□□□□ -1.68
CCDC90B-204ENST00000525504 ZNF221Q9UK13 617 aa4.58□□□□□ -1.68
CCDC90B-204ENST00000525504 BLOC1S6Q9UL45 172 aa4.58□□□□□ -1.68
CCDC90B-204ENST00000525504 IGKV1D-8A0A087WSZ0 117 aa4.57□□□□□ -1.68
CCDC90B-204ENST00000525504 METTL21EPA6NDL7 271 aa4.57□□□□□ -1.68
CCDC90B-204ENST00000525504 H3BUA1 57 aa4.57□□□□□ -1.68
CCDC90B-204ENST00000525504 H7C2Y5 167 aa4.57□□□□□ -1.68
CCDC90B-204ENST00000525504 ZNF561-AS1K7EIQ3 104 aa4.57□□□□□ -1.68
CCDC90B-204ENST00000525504 OVOL1O14753 267 aa4.57□□□□□ -1.68
CCDC90B-204ENST00000525504 FCGR3AP08637 254 aa4.57□□□□□ -1.68
CCDC90B-204ENST00000525504 CD3GP09693 182 aa4.57□□□□□ -1.68
CCDC90B-204ENST00000525504 OR8U9P0C7N5 309 aa4.57□□□□□ -1.68
CCDC90B-204ENST00000525504 GNB3P16520 340 aa4.57□□□□□ -1.68
CCDC90B-204ENST00000525504 DTYMKP23919 212 aa4.57□□□□□ -1.68
CCDC90B-204ENST00000525504 RAB25P57735 213 aa4.57□□□□□ -1.68
CCDC90B-204ENST00000525504 GABARAPL2P60520 117 aa4.57□□□□□ -1.68
CCDC90B-204ENST00000525504 RPS16P62249 146 aaKnown RBP4.57□□□□□ -1.68
CCDC90B-204ENST00000525504 PJVKQ0ZLH3 352 aa4.57□□□□□ -1.68
CCDC90B-204ENST00000525504 FXYD3Q14802 87 aa4.57□□□□□ -1.68
CCDC90B-204ENST00000525504 TMEM177Q53S58 311 aa4.57□□□□□ -1.68
CCDC90B-204ENST00000525504 IGSF11Q5DX21 431 aa4.57□□□□□ -1.68
CCDC90B-204ENST00000525504 HES5Q5TA89 166 aa4.57□□□□□ -1.68
CCDC90B-204ENST00000525504 ACSM6Q6P461 480 aa4.57□□□□□ -1.68
CCDC90B-204ENST00000525504 IZUMO2Q6UXV1 221 aa4.57□□□□□ -1.68
CCDC90B-204ENST00000525504 H1FOOQ8IZA3 346 aaPredicted RBP4.57□□□□□ -1.68
CCDC90B-204ENST00000525504 TEX45Q8NA69 505 aa4.57□□□□□ -1.68
CCDC90B-204ENST00000525504 DDB2Q92466 427 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms