RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 FUOMA2VDF0 154 aa4.7□□□□□ -1.66
NEDD8-203ENST00000524927 ZNF729A6NN14 1252 aaPredicted RBP4.7□□□□□ -1.66
NEDD8-203ENST00000524927 ZNF736B4DX44 427 aaPredicted RBP4.7□□□□□ -1.66
NEDD8-203ENST00000524927 E9PBE3 544 aa4.7□□□□□ -1.66
NEDD8-203ENST00000524927 J3QT63 122 aa4.7□□□□□ -1.66
NEDD8-203ENST00000524927 CXCR6O00574 342 aa4.7□□□□□ -1.66
NEDD8-203ENST00000524927 SERPINB7O75635 380 aa4.7□□□□□ -1.66
NEDD8-203ENST00000524927 CD14P08571 375 aa4.7□□□□□ -1.66
NEDD8-203ENST00000524927 CBLN1P23435 193 aa4.7□□□□□ -1.66
NEDD8-203ENST00000524927 KRTAP5-9P26371 169 aa4.7□□□□□ -1.66
NEDD8-203ENST00000524927 CDK5R1Q15078 307 aa4.7□□□□□ -1.66
NEDD8-203ENST00000524927 FCN2Q15485 313 aa4.7□□□□□ -1.66
NEDD8-203ENST00000524927 REEP3Q6NUK4 255 aa4.7□□□□□ -1.66
NEDD8-203ENST00000524927 UNQ5815/PRO19632Q6UWF5 114 aa4.7□□□□□ -1.66
NEDD8-203ENST00000524927 TMUB2Q71RG4 321 aa4.7□□□□□ -1.66
NEDD8-203ENST00000524927 FAM122BQ7Z309 247 aa4.7□□□□□ -1.66
NEDD8-203ENST00000524927 CD300LFQ8TDQ1 290 aa4.7□□□□□ -1.66
NEDD8-203ENST00000524927 GIPC3Q8TF64 312 aa4.7□□□□□ -1.66
NEDD8-203ENST00000524927 TMEM239Q8WW34 195 aa4.7□□□□□ -1.66
NEDD8-203ENST00000524927 EMG1Q92979 244 aaKnown RBP4.7□□□□□ -1.66
NEDD8-203ENST00000524927 COPS4Q9BT78 406 aa4.7□□□□□ -1.66
NEDD8-203ENST00000524927 ANKRD60Q9BZ19 345 aa4.7□□□□□ -1.66
NEDD8-203ENST00000524927 CHST6Q9GZX3 395 aa4.7□□□□□ -1.66
NEDD8-203ENST00000524927 GFRA4Q9GZZ7 299 aa4.7□□□□□ -1.66
NEDD8-203ENST00000524927 AIG1Q9NVV5 245 aa4.7□□□□□ -1.66
NEDD8-203ENST00000524927 CELA1Q9UNI1 258 aa4.7□□□□□ -1.66
NEDD8-203ENST00000524927 SNX24Q9Y343 169 aa4.7□□□□□ -1.66
NEDD8-203ENST00000524927 KBTBD11-OT1A0A1B0GTJ5 212 aa4.69□□□□□ -1.66
NEDD8-203ENST00000524927 RFXANKO14593 260 aa4.69□□□□□ -1.66
NEDD8-203ENST00000524927 DIRAS3O95661 229 aa4.69□□□□□ -1.66
NEDD8-203ENST00000524927 GABRR1P24046 479 aa4.69□□□□□ -1.66
NEDD8-203ENST00000524927 IFNA8P32881 189 aa4.69□□□□□ -1.66
NEDD8-203ENST00000524927 KRR1Q13601 381 aaKnown RBP4.69□□□□□ -1.66
NEDD8-203ENST00000524927 C5orf64Q2M2E5 130 aa4.69□□□□□ -1.66
NEDD8-203ENST00000524927 C17orf58Q2M2W7 97 aa4.69□□□□□ -1.66
NEDD8-203ENST00000524927 CNPY1Q3B7I2 92 aa4.69□□□□□ -1.66
NEDD8-203ENST00000524927 HACD2Q6Y1H2 254 aa4.69□□□□□ -1.66
NEDD8-203ENST00000524927 CYP4Z1Q86W10 505 aa4.69□□□□□ -1.66
NEDD8-203ENST00000524927 PPP1R27Q86WC6 154 aa4.69□□□□□ -1.66
NEDD8-203ENST00000524927 ZNF573Q86YE8 665 aa4.69□□□□□ -1.66
NEDD8-203ENST00000524927 Q8N377 158 aa4.69□□□□□ -1.66
NEDD8-203ENST00000524927 LINC00471Q8N535 108 aa4.69□□□□□ -1.66
NEDD8-203ENST00000524927 NECAP1Q8NC96 275 aa4.69□□□□□ -1.66
NEDD8-203ENST00000524927 RTN4IP1Q8WWV3 396 aaPredicted RBP4.69□□□□□ -1.66
NEDD8-203ENST00000524927 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.69□□□□□ -1.663e-6■■■□□ 18.4
NEDD8-203ENST00000524927 THRSPQ92748 146 aa4.69□□□□□ -1.66
NEDD8-203ENST00000524927 OR52E6Q96RD3 313 aa4.69□□□□□ -1.66
NEDD8-203ENST00000524927 MLXQ9UH92 298 aa4.69□□□□□ -1.66
NEDD8-203ENST00000524927 ZNF221Q9UK13 617 aa4.69□□□□□ -1.66
NEDD8-203ENST00000524927 MED31Q9Y3C7 131 aa4.69□□□□□ -1.66
NEDD8-203ENST00000524927 TRAV27A0A087WT01 109 aa4.68□□□□□ -1.66
NEDD8-203ENST00000524927 F8WDY8 70 aa4.68□□□□□ -1.66
NEDD8-203ENST00000524927 NBR2O15453 112 aa4.68□□□□□ -1.66
NEDD8-203ENST00000524927 CA1P00915 261 aaPredicted RBP4.68□□□□□ -1.66
NEDD8-203ENST00000524927 IGHV3-7P01780 117 aa4.68□□□□□ -1.66
NEDD8-203ENST00000524927 C1QBP02746 253 aa4.68□□□□□ -1.66
NEDD8-203ENST00000524927 HAAOP46952 286 aa4.68□□□□□ -1.66
NEDD8-203ENST00000524927 FADDQ13158 208 aa4.68□□□□□ -1.66
NEDD8-203ENST00000524927 RGNQ15493 299 aa4.68□□□□□ -1.66
NEDD8-203ENST00000524927 SLC22A6Q4U2R8 563 aa4.68□□□□□ -1.66
NEDD8-203ENST00000524927 LPCAT4Q643R3 524 aa4.68□□□□□ -1.66
NEDD8-203ENST00000524927 MORN3Q6PF18 240 aaPredicted RBP4.68□□□□□ -1.66
NEDD8-203ENST00000524927 ATRAIDQ6UW56 229 aa4.68□□□□□ -1.66
NEDD8-203ENST00000524927 Q6ZRN7 208 aaPredicted RBP4.68□□□□□ -1.66
NEDD8-203ENST00000524927 OR5B3Q8NH48 314 aa4.68□□□□□ -1.66
NEDD8-203ENST00000524927 OR51A7Q8NH64 312 aa4.68□□□□□ -1.66
NEDD8-203ENST00000524927 RASL10AQ92737 203 aa4.68□□□□□ -1.66
NEDD8-203ENST00000524927 LEAP2Q969E1 77 aa4.68□□□□□ -1.66
NEDD8-203ENST00000524927 PINX1Q96BK5 328 aaKnown RBP4.68□□□□□ -1.66
NEDD8-203ENST00000524927 USMG5Q96IX5 58 aa4.68□□□□□ -1.66
NEDD8-203ENST00000524927 RDH12Q96NR8 316 aa4.68□□□□□ -1.66
NEDD8-203ENST00000524927 SOSTQ9BQB4 213 aa4.68□□□□□ -1.66
NEDD8-203ENST00000524927 MAGT1Q9H0U3 335 aa4.68□□□□□ -1.66
NEDD8-203ENST00000524927 Q9H3A6 140 aa4.68□□□□□ -1.66
NEDD8-203ENST00000524927 NIPAL2Q9H841 368 aa4.68□□□□□ -1.66
NEDD8-203ENST00000524927 B9D1Q9UPM9 204 aa4.68□□□□□ -1.66
NEDD8-203ENST00000524927 IGHV3-16A0A0C4DH30 117 aa4.67□□□□□ -1.66
NEDD8-203ENST00000524927 A0A1B0GW64 132 aa4.67□□□□□ -1.66
NEDD8-203ENST00000524927 ODAMA1E959 279 aa4.67□□□□□ -1.66
NEDD8-203ENST00000524927 ZNF705EA8MWA4 302 aaPredicted RBP4.67□□□□□ -1.66
NEDD8-203ENST00000524927 FAM220BPB1ANY3 271 aa4.67□□□□□ -1.66
NEDD8-203ENST00000524927 DCTN6O00399 190 aa4.67□□□□□ -1.66
NEDD8-203ENST00000524927 S1PR2O95136 353 aa4.67□□□□□ -1.66
NEDD8-203ENST00000524927 HAND1O96004 215 aa4.67□□□□□ -1.66
NEDD8-203ENST00000524927 APOC1P02654 83 aa4.67□□□□□ -1.66
NEDD8-203ENST00000524927 GSTT2P0CG29 244 aa4.67□□□□□ -1.66
NEDD8-203ENST00000524927 GSTT2BP0CG30 244 aa4.67□□□□□ -1.66
NEDD8-203ENST00000524927 CLUP10909 449 aa4.67□□□□□ -1.66
NEDD8-203ENST00000524927 PHBP35232 272 aa4.67□□□□□ -1.66
NEDD8-203ENST00000524927 CX3CR1P49238 355 aa4.67□□□□□ -1.66
NEDD8-203ENST00000524927 GNG10P50151 68 aa4.67□□□□□ -1.66
NEDD8-203ENST00000524927 CDK6Q00534 326 aa4.67□□□□□ -1.66
NEDD8-203ENST00000524927 PDZK1IP1Q13113 114 aa4.67□□□□□ -1.66
NEDD8-203ENST00000524927 USF2Q15853 346 aaPredicted RBP4.67□□□□□ -1.66
NEDD8-203ENST00000524927 FAM131AQ6UXB0 335 aa4.67□□□□□ -1.66
NEDD8-203ENST00000524927 TIFABQ6ZNK6 161 aa4.67□□□□□ -1.66
NEDD8-203ENST00000524927 ERASQ7Z444 233 aa4.67□□□□□ -1.66
NEDD8-203ENST00000524927 OAFQ86UD1 273 aa4.67□□□□□ -1.66
NEDD8-203ENST00000524927 SLC25A42Q86VD7 318 aa4.67□□□□□ -1.66
NEDD8-203ENST00000524927 RBM45Q8IUH3 476 aaKnown RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms